MSTRG.157.1.p1 (mRNA) -

Overview
NameMSTRG.157.1.p1
Unique NameMSTRG.157.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000001_pilon:3073567..3076279-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.157.1.p1 ID=MSTRG.157.1.p1|Name=MSTRG.157.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2713bp|location=Sequence derived from alignment at sc0000001_pilon:3073567..3076279- (Clytia hemisphaerica_ch_hm2_pilon)
GTCAGTGTACTTTCTGTGATCTCTGTTAACTCTTGAATTAACTACACATA
ATTACACTTTAATAACTTTTGTTTTCAATTTCAAACTTCAAAGATAAGTG
AGAATATCTTTTAGACAATAGGTTTAGTGGTTCTTTGATTTTTGATCCTT
TATTTCTAAATTTCACAATTTTACTCATTTTTTACCTACGAAATTTTTCT
ACCTAATTTTTCTAGAGAGCTTTTCTAAAATTGATGGAAGAACTTGAAAC
AATTTCATTTTGTATACCATTTTGCCAGGTCGTCCAGAGGCCCAGAGAAT
CTCATGGAAGAAAGAATCAAGACCAGATTGGTGGCCAAGTGATATTCCTT
TCAAACAGCCAAAGAATATGTGTGTTGAACCACTGGACAAGATCATTAAA
ACGTCAATCAAATCCAACATTACTCATTTTATGGTATCTGTTTTGGTTAT
GTTTGTTTTTTTCATTTCTTTTAGAAATTAAATTAAAAGAAATAACTTTT
ATTAACTAAGAGGATTAACTTGGAAAATAAAAATTTTTATTTGGAAAATT
ATTATGATTTTTAAATGTACAAAAAATTAATATTCCTTTTTTACTTTAGG
ATTGCTTAGCAGAATACGATTTGCCTGATACCAGATCCTTTGACAAACTA
CTGGCTTGGTCAGCATCGTTTTTGTTAGAAGCAAAACTTGTCAAAAGCTG
GTTGAAGAAGTGGACAGAGCCTTCTTCTCTAGTTGATAAAGCTCTTGTCA
CACTAAAGTAAGTTACATTATAAATAGAAACTTAGCTGTACTGACTTGGT
ATACTAGGTAGATGCCTTTTCCAAGCAATATAAATCAAACTGAAAATTTT
TATTTTTAATCACTTTATCAAAAATATCAACTAATACGAATTTTGTCTAA
TCTAATCTAATTCATTGAATATTTTTGTTCAATTTTCAGGTATAGAGAAG
TGCTGAATGTGGAAAATGTGGAAAGTCAGCCTGTGTGCTTTGAGAGGATC
ACGCAATGCTTGTCATTCTCTGTTCTTCAAAGTAAAAAATATGACGACTT
TTTTGAACGTTTTGGACTGGCATCTTGTGTCAAAAACTATCATCAATTAT
TGACTGTAAGTTTTTGCTATTATTGAATTTATGAAATAAGATGATTAGCA
GCTCTTAGTCAAATTTTATAGAATTATGTTTTAACTGAGTAAAATTGACA
CTTGTTTCTGGGACACTCTGGCATTAACCTTTTCTTTTAAGACCCTGGGA
TATTACATGTGATTTTTCAAAGGGTTGATAGTCTAGGACACGATATGCTT
TTCTTATATTTCTGTATCATAATTAATGAGATATCGTTTTTGATTATCTT
TAAGATGAACCACAGGGGAGATGATATGATCCCACCCATAGAGGAGGAGC
CAGATAAATTTGCTGCTGCTGTCCTGGCTGATCCTTCGTTAATGACCGGT
ACTTTTACTTATTTGTCATAAAATAAGATTTTTGCTTTTCAACCTGTTTC
AACGCCCCAGTCTTGCTTTTTGTAGTTCTGTTTTATGTAGTTAAAATTGA
TTCAACCTGATAGGTGAATCGAAACCTAAATCTTATAAAGCCAAGTTAAT
TGCACTTATTGAGAGTAAATAAATTTCTTTTAATTGCCTTTAGAAATCAG
TAAACTGATTGGCATTGCTATCGAATGTGACCTTGTTATTGAATGGCATC
GAGAAAATGATTGGATCAAGTTAGGACCATATTTGGCAGATAGGACCCCT
CTTCGTGTTGGTGTCATCAACGAGGAGTTCTGTTCTCTTGTGAAAACTGA
GGATTTTTCTATAGATGTTTGCGGAGAAAAACCATTTTGTATTTCCTCGC
CATCATCAAACCAGATGACTTGTGGTCAATGTGGCTTGAGATACCACATC
ACATGTGTCGGGGACGAGGATGAATGTGGGTGTGGGAAAATTGGATGGTT
AAAAGAAAGGTACTTATCAGTTAATTTAGCTAATATAATAAATAGCCAGC
TATTTTTCATTTTTATATTCTGAGAAGAAAATCGGCTTACACCGTATTTT
GTAAATCCCGTAATTCACAGTTATCAACAAGGGAATCTTTTCACTTTGCC
GATGTTAGAAAAAGTGACGTCAAACTAGAGCAGCTTTGTTTCGGGATAAA
TACAGGGTGAACATTTCTAGTTTTCATGCAAAATTCTGAAAACTAAAAAT
CAATCTAGAGAAAAAGATATTTTGCTTGGGAGCTTTGAATTTCTGCTCAG
AATTATATTTGAAATTCAAGGAATCTAAGTTTTTTAAATTTTATTTTAGA
ATCAAAAATGACATTCTTGACGTCAAAAGATTTGAACGAAATACCGAAAA
ATCAGCTCATATTGCAAGGGTATCTTGACTTCCTTTTCAATTTCATGCTA
AGTGTGACAAGGAGTGTGTTTTTTATTGGAAGCATCAATAAATGTTTTTC
TTATTTAATAAAAAAATGGATGTATGAGTTATTTAATTTAAAAGAGAAAA
AGAGTCTTAAGTTTGGGTTTCAATTACAGATGAACCAGATGAAACATGAA
CATTAAAAAGGAGATAGATTCTATTGCTTACATATATTTTTTAATTCAGA
GCTTTATCGAGGATATTTGCCAAGGTAATATGAAAACAAGACGATCCGTT
TCTATTGGTTCCCTACCCTTAGATGTAAACAAATTTTTTACTTGTATGAT
GTTAAAAGAATCA

Coding sequence (CDS) from alignment at sc0000001_pilon:3073567..3076279-

>MSTRG.157.1.p1 ID=MSTRG.157.1.p1|Name=MSTRG.157.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=6888bp|location=Sequence derived from alignment at sc0000001_pilon:3073567..3076279- (Clytia hemisphaerica_ch_hm2_pilon)
AGCTTTATCGAGGATATTTGCCAAGGTAATATGAAAACAAGACGATCCGT
TTCTATTGGTTCCCTACCCTTAGATGTAAACAAATTTTTTACTTGTATGA
TGTTAAAAGAATCAAATCAAAAATGACATTCTTGACGTCAAAAGATTTGA
ACGAAATACCGAAAAATCAGCTCATATTGCAAGGAAATCAGTAAACTGAT
TGGCATTGCTATCGAATGTGACCTTGTTATTGAATGGCATCGAGAAAATG
ATTGGATCAAGTTAGGACCATATTTGGCAGATAGGACCCCTCTTCGTGTT
GGTGTCATCAACGAGGAGTTCTGTTCTCTTGTGAAAACTGAGGATTTTTC
TATAGATGTTTGCGGAGAAAAACCATTTTGTATTTCCTCGCCATCATCAA
ACCAGATGACTTGTGGTCAATGTGGCTTGAGATACCACATCACATGTGTC
GGGGACGAGGATGAATGTGGGTGTGGGAAAATTGGATGGTTAAAAGAAAG
ATGAACCACAGGGGAGATGATATGATCCCACCCATAGAGGAGGAGCCAGA
TAAATTTGCTGCTGCTGTCCTGGCTGATCCTTCGTTAATGACCGGTATAG
AGAAGTGCTGAATGTGGAAAATGTGGAAAGTCAGCCTGTGTGCTTTGAGA
GGATCACGCAATGCTTGTCATTCTCTGTTCTTCAAAGTAAAAAATATGAC
GACTTTTTTGAACGTTTTGGACTGGCATCTTGTGTCAAAAACTATCATCA
ATTATTGACTGATTGCTTAGCAGAATACGATTTGCCTGATACCAGATCCT
TTGACAAACTACTGGCTTGGTCAGCATCGTTTTTGTTAGAAGCAAAACTT
GTCAAAAGCTGGTTGAAGAAGTGGACAGAGCCTTCTTCTCTAGTTGATAA
AGCTCTTGTCACACTAAAATGTGTGTTGAACCACTGGACAAGATCATTAA
AACGTCAATCAAATCCAACATTACTCATTTTATGAGCTTTATCGAGGATA
TTTGCCAAGGTAATATGAAAACAAGACGATCCGTTTCTATTGGTTCCCTA
CCCTTAGATGTAAACAAATTTTTTACTTGTATGATGTTAAAAGAATCAAA
TCAAAAATGACATTCTTGACGTCAAAAGATTTGAACGAAATACCGAAAAA
TCAGCTCATATTGCAAGGAAATCAGTAAACTGATTGGCATTGCTATCGAA
TGTGACCTTGTTATTGAATGGCATCGAGAAAATGATTGGATCAAGTTAGG
ACCATATTTGGCAGATAGGACCCCTCTTCGTGTTGGTGTCATCAACGAGG
AGTTCTGTTCTCTTGTGAAAACTGAGGATTTTTCTATAGATGTTTGCGGA
GAAAAACCATTTTGTATTTCCTCGCCATCATCAAACCAGATGACTTGTGG
TCAATGTGGCTTGAGATACCACATCACATGTGTCGGGGACGAGGATGAAT
GTGGGTGTGGGAAAATTGGATGGTTAAAAGAAAGATGAACCACAGGGGAG
ATGATATGATCCCACCCATAGAGGAGGAGCCAGATAAATTTGCTGCTGCT
GTCCTGGCTGATCCTTCGTTAATGACCGGTATAGAGAAGTGCTGAATGTG
GAAAATGTGGAAAGTCAGCCTGTGTGCTTTGAGAGGATCACGCAATGCTT
GTCATTCTCTGTTCTTCAAAGTAAAAAATATGACGACTTTTTTGAACGTT
TTGGACTGGCATCTTGTGTCAAAAACTATCATCAATTATTGACTGATTGC
TTAGCAGAATACGATTTGCCTGATACCAGATCCTTTGACAAACTACTGGC
TTGGTCAGCATCGTTTTTGTTAGAAGCAAAACTTGTCAAAAGCTGGTTGA
AGAAGTGGACAGAGCCTTCTTCTCTAGTTGATAAAGCTCTTGTCACACTA
AAATGTGTGTTGAACCACTGGACAAGATCATTAAAACGTCAATCAAATCC
AACATTACTCATTTTATGAGCTTTATCGAGGATATTTGCCAAGGTAATAT
GAAAACAAGACGATCCGTTTCTATTGGTTCCCTACCCTTAGATGTAAACA
AATTTTTTACTTGTATGATGTTAAAAGAATCAAATCAAAAATGACATTCT
TGACGTCAAAAGATTTGAACGAAATACCGAAAAATCAGCTCATATTGCAA
GGAAATCAGTAAACTGATTGGCATTGCTATCGAATGTGACCTTGTTATTG
AATGGCATCGAGAAAATGATTGGATCAAGTTAGGACCATATTTGGCAGAT
AGGACCCCTCTTCGTGTTGGTGTCATCAACGAGGAGTTCTGTTCTCTTGT
GAAAACTGAGGATTTTTCTATAGATGTTTGCGGAGAAAAACCATTTTGTA
TTTCCTCGCCATCATCAAACCAGATGACTTGTGGTCAATGTGGCTTGAGA
TACCACATCACATGTGTCGGGGACGAGGATGAATGTGGGTGTGGGAAAAT
TGGATGGTTAAAAGAAAGATGAACCACAGGGGAGATGATATGATCCCACC
CATAGAGGAGGAGCCAGATAAATTTGCTGCTGCTGTCCTGGCTGATCCTT
CGTTAATGACCGGTATAGAGAAGTGCTGAATGTGGAAAATGTGGAAAGTC
AGCCTGTGTGCTTTGAGAGGATCACGCAATGCTTGTCATTCTCTGTTCTT
CAAAGTAAAAAATATGACGACTTTTTTGAACGTTTTGGACTGGCATCTTG
TGTCAAAAACTATCATCAATTATTGACTGATTGCTTAGCAGAATACGATT
TGCCTGATACCAGATCCTTTGACAAACTACTGGCTTGGTCAGCATCGTTT
TTGTTAGAAGCAAAACTTGTCAAAAGCTGGTTGAAGAAGTGGACAGAGCC
TTCTTCTCTAGTTGATAAAGCTCTTGTCACACTAAAATGTGTGTTGAACC
ACTGGACAAGATCATTAAAACGTCAATCAAATCCAACATTACTCATTTTA
TGAGCTTTATCGAGGATATTTGCCAAGGTAATATGAAAACAAGACGATCC
GTTTCTATTGGTTCCCTACCCTTAGATGTAAACAAATTTTTTACTTGTAT
GATGTTAAAAGAATCAAATCAAAAATGACATTCTTGACGTCAAAAGATTT
GAACGAAATACCGAAAAATCAGCTCATATTGCAAGGAAATCAGTAAACTG
ATTGGCATTGCTATCGAATGTGACCTTGTTATTGAATGGCATCGAGAAAA
TGATTGGATCAAGTTAGGACCATATTTGGCAGATAGGACCCCTCTTCGTG
TTGGTGTCATCAACGAGGAGTTCTGTTCTCTTGTGAAAACTGAGGATTTT
TCTATAGATGTTTGCGGAGAAAAACCATTTTGTATTTCCTCGCCATCATC
AAACCAGATGACTTGTGGTCAATGTGGCTTGAGATACCACATCACATGTG
TCGGGGACGAGGATGAATGTGGGTGTGGGAAAATTGGATGGTTAAAAGAA
AGATGAACCACAGGGGAGATGATATGATCCCACCCATAGAGGAGGAGCCA
GATAAATTTGCTGCTGCTGTCCTGGCTGATCCTTCGTTAATGACCGGTAT
AGAGAAGTGCTGAATGTGGAAAATGTGGAAAGTCAGCCTGTGTGCTTTGA
GAGGATCACGCAATGCTTGTCATTCTCTGTTCTTCAAAGTAAAAAATATG
ACGACTTTTTTGAACGTTTTGGACTGGCATCTTGTGTCAAAAACTATCAT
CAATTATTGACTGATTGCTTAGCAGAATACGATTTGCCTGATACCAGATC
CTTTGACAAACTACTGGCTTGGTCAGCATCGTTTTTGTTAGAAGCAAAAC
TTGTCAAAAGCTGGTTGAAGAAGTGGACAGAGCCTTCTTCTCTAGTTGAT
AAAGCTCTTGTCACACTAAAATGTGTGTTGAACCACTGGACAAGATCATT
AAAACGTCAATCAAATCCAACATTACTCATTTTATGAGCTTTATCGAGGA
TATTTGCCAAGGTAATATGAAAACAAGACGATCCGTTTCTATTGGTTCCC
TACCCTTAGATGTAAACAAATTTTTTACTTGTATGATGTTAAAAGAATCA
AATCAAAAATGACATTCTTGACGTCAAAAGATTTGAACGAAATACCGAAA
AATCAGCTCATATTGCAAGGAAATCAGTAAACTGATTGGCATTGCTATCG
AATGTGACCTTGTTATTGAATGGCATCGAGAAAATGATTGGATCAAGTTA
GGACCATATTTGGCAGATAGGACCCCTCTTCGTGTTGGTGTCATCAACGA
GGAGTTCTGTTCTCTTGTGAAAACTGAGGATTTTTCTATAGATGTTTGCG
GAGAAAAACCATTTTGTATTTCCTCGCCATCATCAAACCAGATGACTTGT
GGTCAATGTGGCTTGAGATACCACATCACATGTGTCGGGGACGAGGATGA
ATGTGGGTGTGGGAAAATTGGATGGTTAAAAGAAAGATGAACCACAGGGG
AGATGATATGATCCCACCCATAGAGGAGGAGCCAGATAAATTTGCTGCTG
CTGTCCTGGCTGATCCTTCGTTAATGACCGGTATAGAGAAGTGCTGAATG
TGGAAAATGTGGAAAGTCAGCCTGTGTGCTTTGAGAGGATCACGCAATGC
TTGTCATTCTCTGTTCTTCAAAGTAAAAAATATGACGACTTTTTTGAACG
TTTTGGACTGGCATCTTGTGTCAAAAACTATCATCAATTATTGACTGATT
GCTTAGCAGAATACGATTTGCCTGATACCAGATCCTTTGACAAACTACTG
GCTTGGTCAGCATCGTTTTTGTTAGAAGCAAAACTTGTCAAAAGCTGGTT
GAAGAAGTGGACAGAGCCTTCTTCTCTAGTTGATAAAGCTCTTGTCACAC
TAAAATGTGTGTTGAACCACTGGACAAGATCATTAAAACGTCAATCAAAT
CCAACATTACTCATTTTATGAGCTTTATCGAGGATATTTGCCAAGGTAAT
ATGAAAACAAGACGATCCGTTTCTATTGGTTCCCTACCCTTAGATGTAAA
CAAATTTTTTACTTGTATGATGTTAAAAGAATCAAATCAAAAATGACATT
CTTGACGTCAAAAGATTTGAACGAAATACCGAAAAATCAGCTCATATTGC
AAGGAAATCAGTAAACTGATTGGCATTGCTATCGAATGTGACCTTGTTAT
TGAATGGCATCGAGAAAATGATTGGATCAAGTTAGGACCATATTTGGCAG
ATAGGACCCCTCTTCGTGTTGGTGTCATCAACGAGGAGTTCTGTTCTCTT
GTGAAAACTGAGGATTTTTCTATAGATGTTTGCGGAGAAAAACCATTTTG
TATTTCCTCGCCATCATCAAACCAGATGACTTGTGGTCAATGTGGCTTGA
GATACCACATCACATGTGTCGGGGACGAGGATGAATGTGGGTGTGGGAAA
ATTGGATGGTTAAAAGAAAGATGAACCACAGGGGAGATGATATGATCCCA
CCCATAGAGGAGGAGCCAGATAAATTTGCTGCTGCTGTCCTGGCTGATCC
TTCGTTAATGACCGGTATAGAGAAGTGCTGAATGTGGAAAATGTGGAAAG
TCAGCCTGTGTGCTTTGAGAGGATCACGCAATGCTTGTCATTCTCTGTTC
TTCAAAGTAAAAAATATGACGACTTTTTTGAACGTTTTGGACTGGCATCT
TGTGTCAAAAACTATCATCAATTATTGACTGATTGCTTAGCAGAATACGA
TTTGCCTGATACCAGATCCTTTGACAAACTACTGGCTTGGTCAGCATCGT
TTTTGTTAGAAGCAAAACTTGTCAAAAGCTGGTTGAAGAAGTGGACAGAG
CCTTCTTCTCTAGTTGATAAAGCTCTTGTCACACTAAAATGTGTGTTGAA
CCACTGGACAAGATCATTAAAACGTCAATCAAATCCAACATTACTCATTT
TATGAGCTTTATCGAGGATATTTGCCAAGGTAATATGAAAACAAGACGAT
CCGTTTCTATTGGTTCCCTACCCTTAGATGTAAACAAATTTTTTACTTGT
ATGATGTTAAAAGAATCAAATCAAAAATGACATTCTTGACGTCAAAAGAT
TTGAACGAAATACCGAAAAATCAGCTCATATTGCAAGGAAATCAGTAAAC
TGATTGGCATTGCTATCGAATGTGACCTTGTTATTGAATGGCATCGAGAA
AATGATTGGATCAAGTTAGGACCATATTTGGCAGATAGGACCCCTCTTCG
TGTTGGTGTCATCAACGAGGAGTTCTGTTCTCTTGTGAAAACTGAGGATT
TTTCTATAGATGTTTGCGGAGAAAAACCATTTTGTATTTCCTCGCCATCA
TCAAACCAGATGACTTGTGGTCAATGTGGCTTGAGATACCACATCACATG
TGTCGGGGACGAGGATGAATGTGGGTGTGGGAAAATTGGATGGTTAAAAG
AAAGATGAACCACAGGGGAGATGATATGATCCCACCCATAGAGGAGGAGC
CAGATAAATTTGCTGCTGCTGTCCTGGCTGATCCTTCGTTAATGACCGGT
ATAGAGAAGTGCTGAATGTGGAAAATGTGGAAAGTCAGCCTGTGTGCTTT
GAGAGGATCACGCAATGCTTGTCATTCTCTGTTCTTCAAAGTAAAAAATA
TGACGACTTTTTTGAACGTTTTGGACTGGCATCTTGTGTCAAAAACTATC
ATCAATTATTGACTGATTGCTTAGCAGAATACGATTTGCCTGATACCAGA
TCCTTTGACAAACTACTGGCTTGGTCAGCATCGTTTTTGTTAGAAGCAAA
ACTTGTCAAAAGCTGGTTGAAGAAGTGGACAGAGCCTTCTTCTCTAGTTG
ATAAAGCTCTTGTCACACTAAAATGTGTGTTGAACCACTGGACAAGATCA
TTAAAACGTCAATCAAATCCAACATTACTCATTTTATG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.157MSTRG.157Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.157.1.p1MSTRG.157.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.157.1.p1.exon7MSTRG.157.1.p1.exon7Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.157.1.p1.exon6MSTRG.157.1.p1.exon6Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.157.1.p1.exon5MSTRG.157.1.p1.exon5Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.157.1.p1.exon4MSTRG.157.1.p1.exon4Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.157.1.p1.exon3MSTRG.157.1.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.157.1.p1.exon2MSTRG.157.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.157.1.p1.exon1MSTRG.157.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000001_pilongenomesc0000001_pilon:3073567..3076279 -