|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000140_pilon:625396..634584+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.15648.7.p2 ID=MSTRG.15648.7.p2|Name=MSTRG.15648.7.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=9189bp|location=Sequence derived from alignment at sc0000140_pilon:625396..634584+ (Clytia hemisphaerica_ch_hm2_pilon)
tttttttacttagaAATATCTATGTATGGTAATGGAGTTTGTCGAGGGTG
GAGATTGCGCTTCGCTCCTGAAGAACATCACCGTTTTTCCGTTCGATCTT
GCAAGGCGGTATTTCGCGGAAACACTCCTCGCGGTGGAATATATTCATGA
TTACGGAATCATTCATCGGGATTTGAAACCGGATAAGTAAGTTGTGGCCA
TAGTTCTTCTATATGGTCCTGCTACAGGTGCCTCTgacaactatagacgc
ttataATAGGCTCTCAATCAGCACCTTGTTGTACCAACTAACCAAGGGTT
GACTGAGAAAAGTGACCTACTTTCAGAAGCTCATTTTTTAACTAGCTAGG
AAACTGTTCTTTTTTCGATACAACGTGGCAGCGGAATCTTAGTACGCGAA
GCGAAATCTTACCCAAACGGACGGTAGACTGTGATCGTTTTAAAacgttt
tcaaaattgattcctTCCCTTTGTTCCAGTCTATTGATAACGGCTATGGG
ACATATCAAGTTGGCAGATTTCGGACTCTCAAAAGTTGGTCTCATTAACA
GTAAGTCAGTATGTTGTTTGTTTTCAATGCCCATGTTACCATGCCAACCT
ATTTGGTGATgcctggagagtcttctgagaacttttaacattttccaccc
aatacgtcacttaaacaataaaaaaagtgacGTACACTACTAACCCAATC
ACCATTCCTCACGGACATCTCCATTCCTCTTCTATTCTTCACCATTCCTC
AgcgttcctcgaacgttcctcaggaatagAGATATTTCAACTTTGTTTTA
GCATTCCTCATCcattcctcgaacgttcctgaGGAATGGACATTTCTGAC
GTAATTTTTAGGtgttcctcactcgttcctcgaacgttcctcaggaatgg
acttTCATGACGTTATTTTCAAgcgttcctcactcgttcctcaggaatgg
acatttctgacgttatttttaagcgttcctcactcgttcctcaggaatgg
acatttctgacgttatttttaagcgttcctcactcgttcctcaggaatgg
acatttTTGACGTTACTTTTAAGGCGTTCCTCACTACTTCCTCGAACGTT
CCCCAGGAATGGATGACGTTATTTTTTAGCGCTCCTCActcgttcctcag
gaatggagatatttcttcttcactttatCGTTTATCATCTTTTCCTCACA
CGTTCCTGAAGAATGGGCTTTCATGACGTTATTTAAAAGTGTTCCTCATT
TGTTCCtcaggaaaaaacattttcggaGCTGTTAATACATTTTCATGGAT
AAgatattcaatatcaaaaacttttatgtTGCTTAAAATTTTAGGCTCTT
CCTCCAGAGAAAAAGAGGGCTAGAGAAATACGTTTGTCCTTTAGAACACA
TTAGTAACGGAAGCTCACAAACAACTAGGGCttttttttAATCCTGTGTT
TTAAGTTCATTGGAAATCCCAACCcgatggaggtcctataaataaaCCCA
TGTCCGtgcgttagttaccagcttttctcaagattgacTTATTCAaagtt
tctgatttttgcacaaaggtgcatgactataaaccctcgaatgtgacaga
gcctgattggatcatgattttttgcacgaaagtagggtattatcgtaggt
aaaagatggctgaagcagatatttttgcaaaaaagatttttcggcTCATG
AGGAACAATAAAGTGAAAAGGAAATATTTCCATTCCTGGGGGGccttcct
gaggaacgttcgaggaacgagtgaggaacgcttaaaaataacgtcagaaa
tgtccattcatgaggaacgttcgaggaacgagtgaggaacaCCTAAAAAT
TATGTCAGAGATGCCCATTCCtcaggaacgttcgaggaatagatgaggaa
tgctgaaacaaagttgaaatatctctattcctgaggaacgttcgaggaag
tAGTGAGGAACGCTTAAAAATTACGTCAGAAATATCCATTCCtcaggaac
gttcgaggaatgGATGAGGAATGCTAAAACAAAGTTGAAATATCTCTATT
CCtcaggaacgttcgaggaatagatgaggaatgctaaaataaagttttga
aatatccaTTCCTTAGAAATGTTCGAGGAACGCTGAAGAATGGTGAAGAA
TAGAAGAGGAATAGTGAGGAATGGGGATGTCCATGAGGAATGTTGATTGG
GTTAGTAGtggtattgggtggaacaaaacagaaaagttgcataatttcgt
gaaggcgttgcagtggtgcatatcatgaatagagccTACTTCACTTTCTT
AGTTTTtgtgatgacgctgagtccatcCAGTGAAGTAAACTAAGAGCAAT
TGACGAAGgcgccattttgaaagaaaagaccAAAAATTCGAAATAACGAG
AAAACTACTTCCACTCAAACAAATGAAATCTTCAATGAAAAACAACATGA
ATAATAGATTTTCGGTACCCTAGACAACTAGAGTCCAACGTACTGTTTTT
TACTGTATTACGTTCAGCAAAGCTAGGAAAATGATAGCTGCAATATTGAG
TTGGGTCATAAAAAAGGGTATCAAGGacataaaaattgtaaacacaCAGA
GGATTGGAGTATCCACGGAAGAGAAAGAGGAGGAAGGGAGGTATCGACCA
ATCAAGGTAGTTTTCGAAAATAAAGAAGACAAGAACAAAGTCTTGAGAAC
CATCACGACATACAAAGGCCCTCCTTCATCCTATCGAGCAACAGAAGACC
TCACAATTATTGAACGATTGACAATCAAAGAATTTAGCAAGAGAGCACGC
GAGCTCAAcgctcaaatgaaagacaaaactATTCAATTTAAAGTCAGGGG
AAGCCCCAGAACAAAATTATACCTAAAGAAAACTGTAACAACAAGCGTTT
GTAAAAAGATAGGTTCTTAGAGGCCCACCGCGAGCCTTGAACCTCAATCC
TTCAATAAatttaatcgcgccatccagccTTAAGTGGAAGCCGGGCTAGC
CATGGTACAGCTTTAATTAAATGTTTGAAAgttaccaaaataaaaaatga
aaagagaaaatttaaaagttaattCATAATTATAGTGAagttataccggg
tgacccacgaaaaaattcagacgtttctcgacttcttgaggccgaacaaa
tgtcccaatgtgcttggagtttagatatttagaaagtagatatcctaact
taaaatttgagctatcactttttaaatttgatcaatttgttctctactta
tgagcttttaaagtcaaaattcactttacggaaagtgtaaaaaacacgta
aaaaaggggtatcaaatttttgatatacagtttttgaaaaaaatctgaaa
aatctaaaaaagcgccaatttttataaaaaccagccttgttttaaacaag
aattacttttaaaggtgtttttattaattattaatgtcataaaactcgtt
aaataagtcaatttgtaaatgattttctaattgattgcataaatttaata
cctcttttttacgtgttttttacactttccgaaaagtgaattttgacttt
aaaagctcataagtagagaacaagttagtcaaatttaaaaagtgatagct
caaattttaagttaggatatctactttctaaatatcaaaactccaagcac
tttgggacatttgttcggcctcaagatgtcgggaaacgtctgaacttttt
cgtgggtcaacCGGTATAcactgaagaaaatacaaactagTGACTAAAGG
CTTGGGggcacgagaagtttttttctcgttggtgcaatgcaacatgcacc
gtcccaccaacctgaaacgctttctcgtgtcttcaccccatttttctttc
ttgataaaaaaatgtaaaaggtaaaaaaaatgtTCCAGAGTCAGACAAAG
ATGTGACATATTAGAAATGCTCAATCAAACACAAACTGAAGCAActcaag
aattgaaaaatatttcttcaacttttttctaGTGACAACGAACATTTGTG
AAGAGACCGTACAACAGTTCAAAGATGTTCAAGTATTTGGCACTCCGGAT
TATATCGCACCCGAAGTTATCTTACGGAAAGGATACGGtaaagatgtttt
tttataaacacagaGTGTTAAAGCCCATCTATGATCTATTAGAGTAATTC
CTacgagatttctattgtaatactcccgaaacaatcccacaatacatcgc
ttttttagaaaaatcaaaaactccgataagatctattgacTAATAATGAT
GTATTATACCAAAGTtcaactccgataagatctattccGTTTTATTTCCA
GGTCCTGCTGTCGACTATTGGTCTCTTGGGATTATCTTGTACGAATTTCT
GATTGGTGTTACTCCGTTCTTTGGCGAAACTGTCTCTGAAGTTTTTGATA
TGATTTTAACTGGTAAGTTGCCAACATTACACTTCGATTAAGAAGGgagt
ttatctaaagaatcctgcattactaaaaatagacaaaaaaagaacgacat
atttcgccgtccacaaccccggccgaaagtgactgtactccgacagattc
attcctctttgtttatcacgggaattaactacatgtggtttaaaagaacg
acaaattatgcatgcgtgttacaatgcaggattctttagaggaacagact
ggaGGGCTGTGATGAAgctgtaccattttattttacgAAATTCCTCGACT
TACAGCCAGTTATTATAGCTATTCATGAGTCTGTTTGCTTATTCTGCAAA
AAACATTTcacagctccattaaaaacgcAGACAATTCATTTCAATTCTTA
TTCGACACTTTGAAGTCAAAACATTGTAAACTCTTTGGTCATTAACACAT
TGAAGTGTTGAATCGAACAATTCAGTTACGTCACGcgctatcttttgttt
tgatgattggttgaataaCTGCAATCTTTATGCAAGCTCAGCGTTTTTGT
AGCAGCGATTCAAACTTCGGAAAAcataatgtcaatctggctttaagTTG
CAGTTCACAGCCCTGACTTTCTGCTTTTGGAAATTATTGAAATCGAAGAA
TCGACAATAAGTATGAGATTCTTTGggtgataaaaaatttgttttcatta
ttGATATTGAGATCAACAGCAAtcagctacacgtttttttataagaacaa
actatataagagcataaggcttcgatggtcaaaatactaaaacaagttaa
gaacattttaaggcttcgtggaacattcgaaggcttcaagaaTTGTGGAT
GTTCTTCTTTCTGGTTATTCTTAGCGAGTGTTTTATGCTTCTATATGAGG
AAGATTAAGGTTCTAATCGTTTTAagagacaaacaaacaaacaaagtttC
TTTAGTCTAGCCTTTGGAAAAGTTTTCGgaataaagactttgttttttaG
TGAGAGTGagatcgtttgcttactcatcaatttcaatttcagtctacaac
cttttttactttgaattgacacggatgtggagcaaaattgggcagaacaa
ggaaaagaaaaatttgtttttgcttatatcagcacaatataacaataagc
TGACACTGCCtcgatatgaaacatgtgtttGATATTaaacgggaacactt
gtgtaaaaactaAACCTTTAAATTATACATTTCATGATAACTCTTCTCCC
TTTTCAGGTGAAATTGAATGGCCTGAGGGTGACGAAGCCTTACCTGACGA
AGCAACCAATATCATTAAACACTTACTGGTTCGTCAAGCGACCGAACGTC
TAGGAGCGAACGGAGCGGCGGACGTCCGCGCGCATTCCTTCTTTCAAAAC
GTCAATTGGAATTCTTTGTTACGTGAGAAAGCAGAGTTCATCCCAGTGTT
GGATAATGAAGAGGACACGAGTTATTTCGATAGTAAGTATCATTGGGTTC
gattcacagatatcttatataaaacactagataatGTTATATTGTCTTCA
GCTGAAGCAAAAAATTTCGCCAACCTTAATAAGCAGACCATCGAGACTGC
TTTGTTTGAATgaattgccggtaccgaactgtgGTCTAATTTCAGCCAAT
ATGGATCGTTACAACCACATAAGATCGCGTCAGCCGCTAGATCACATTAT
CCATAGTAACCTCTGTTATTTCTCATTCTAGCGCGCGAGGATGGTTACAA
CCACTTAAGATCGCGTCAGCCGCTAGATCATATTTCCTATAGGAACCTCT
GTTATTTCTCATTCTAGCGTGCGAGGATGGTTACAACCACTTAAGATCGC
GTCAGCCGCTAGATCATATTTCCTATAGGAACCTCTGTTATTTCTCATTC
TAGCGCGCGAGGATGGTTACAACCACTTAAGATCGCGTCCGCCGCTAGAA
CATATTTCCCATAGTAACCTCTGTTATTTCTCATTCTAGCGCGCGAGGAT
CGTTATAATCACTTAGTATTCTCATTGAGCTCACCTTAGGACACCTGCGT
TATCGTTTGACAGATGTGCCGCCCCAGCCCGCGTCAGCCGCTAGATCATA
TTTCCTATAGTAACCTCTGTTAATTCTCATTCTAGCGCGCGAGGATCGTT
ATAATCACTTAGTATCGCTTCAGCCGCTAGATCATATTTCCTATAGTAAC
CTCTGTTATTTCTCATTCTAGCGCGTGAGGATCGTTATAATCACTTAGTA
TTCTCATTGAGCTCACCTTAGGACACCTGCGTTATCGTTTGACAGATGTG
CCGCCCCAGCCCGCGTCAGCCGCTAGATCCTATTTCCTATAGTAACCTGT
GTTATTTTTCATTCTAGCGCGTGAGGATCGTTACAATCACTTAGTATCAG
ACGAAGACGAAGAAGATGACGACAATGACGTCGACTTTCTCAACTTTTCC
ACGTGTTCACCAAGATTCAGTCGACTCATATCAACGCATGAGAATTCCAA
AGACTTTATCAATACTTCGCAACTCAAAGATTTGAAAGAGCAAACATCAA
AAGAAGTCAGTAGCGCTGATAACTGTTCAGACGATCAACAAGATGACGAG
GAGACTAGCCTGGATTCCTCAACAGTAAAAAGTGAGGCTAGTGCAACACA
GTCTATTGATATCCCGCCTCCGAATTCACCAAGCGATACCGTCCGTATGA
AGTTGGACGCTATTTTGTTGAGTTCCGATACTGCGACTGATTCCGGAAAT
GATTCCGGAACTCATACATCATCCGGTAACAGTTCTCTAAATAATTCGAT
GAATACAGGATCGCCGAGAAGTCCGGGCGGCCGCGTGGCGACATCGTTGC
TGAAGCAAGTTCACGTGGACGTGATGAAAAGACAGGAAGAATCGGACAGA
GATACTGAGTAtgttttttggaccttttttttcaagccCCGTTGTAATAG
CTTGGACCGTactgtttgttttgtttttctacgttatttaagtttttttg
taccttcgtttaactttgattttcagttgacgtcattttgattttgattt
tgattttgatttgatttaatttgaatttgataGTAATTccgttactctta
ggttccaaataaacgccccccccccgcttgttaatttttcgaaaattttc
caaccccccccccggaccttattaggaccccccgtttattaatctctaag
aatattttcagctgtcaaagagaaggccccttattttgctctaaatagcg
tgatattagcctatttttaccttatttttgggtttcagaagtataatttc
caaccccccccccccggcaattaggtcccccccgtttattaaaatctaga
aaattttccaacgccccccccccccgtttatttggaacctaagagtacgt
tTCACACGACATTCAAATCTCCGTAAATTTTGACTCAATTTCTTTAAATG
TCTCTCCTTACCAATTTTCTCTTCCTCTCTCCAGTGCCAGTACAAGCAGT
TGTGACGTTTCTCCGCGCCGCTTCTTGTCGGCCTCGTTCACTGCGACGCG
TGTGCCAAGTCCGAAGCAGCCATCTCCGCTAGTCCTCGATTCTCTCTCCA
TACAATCAGACGATTCCGCTTCAACACAGCCATCGCCGAACAGCGAATCG
ATTGTCTCTGAACCGAGCACGCCTTTACTGACAACTCAATCAGCTGAGAA
AATAGACGATAGAAATCGAACAGGTTTGTTGAAATTCAGTGGTTTCTCCA
TAACTctaacacgcacggggaactcaaatttgttcaagttgagaaaacat
tcgagttatagaggttggCGTTGAAGAGACTCGTCTGTATTCAtattata
ttcatgatatgcaccattgcaatgtcttccattcaaaccaatagctgatt
ggttgaaagtgacgtattgacggGTTTTATGTCACTTACGACCAATGAGC
TGTTGGtttcgtgatgtaatgtcagaagacattgcagtggtgcatatcat
tagACGTCAAGTAACATAAACTCACAAACCAAGATATGGTCGTTGTCAAG
GCAACAACGGCAAAAgggcaaatttcaaaattagtatcttaggaaaatga
gaattttttctaTAAGATAAATCTTTGACAAAGAGATTCGGCCTTCGGTC
ATGCGGATGAATCTCTCCTCTGTAAAATGAAAGGTCCAATTTCATTGTCA
AAGGGTCATCTTATAGAAAGATTCTCAACATGCTAAGAGACTCGTTTTGA
GATTGGTCCTTCTGCTTTGACAACGAGgatatgaaattaaaaatcttaGT
TATTTTTATGTTCCATCAAAGTTAAATTTTGTGGCTTTAATGAGACTTTT
AACGGCAAACAAATAGAATGTAGGCTACGTCATGTCTTTCTTCGATTCCA
GAGTAAAACTCCTACACTTTGAGATATgtgcactgctcttgttttgaata
ttgaaattctccggatacATCGCACGCGcagaggttttaatgaaacaata
gagagtttcgaaacctaagccaatcagctgtgttttaaacattcttttat
tttaaatctctattgataaccttcatttgttaaaaatttctattatgttt
aatcCTATTAATAGGTGAATTCCCGGTGgaggtcactagtggccgcccaT
AGCAGTGCCtgtagaccaagagtaaggcctaaaagcctggtttcattttt
tttcacaggGGTAGTGCGGACACGGTCAACTCCACCTTGTATCGATTTGA
GCAAAATCTCTGTTGGCGTACCACGATTAGAACTTTCTG Coding sequence (CDS) from alignment at sc0000140_pilon:625396..634584+ >MSTRG.15648.7.p2 ID=MSTRG.15648.7.p2|Name=MSTRG.15648.7.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1593bp|location=Sequence derived from alignment at sc0000140_pilon:625396..634584+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGTTGGACGCTATTTTGTTGAGTTCCGATACTGCGACTGATTCCGG
AAATGATTCCGGAACTCATACATCATCCGGTAACAGTTCTCTAAATAATT
CGATGAATACAGGATCGCCGAGAAGTCCGGGCGGCCGCGTGGCGACATCG
TTGCTGAAGCAAGTTCACGTGGACGTGATGAAAAGACAGGAAGAATCGGA
CAGAGATACTGATGCCAGTACAAGCAGTTGTGACGTTTCTCCGCGCCGCT
TCTTGTCGGCCTCGTTCACTGCGACGCGTGTGCCAAGTCCGAAGCAGCCA
TCTCCGCTAGTCCTCGATTCTCTCTCCATACAATCAGACGATTCCGCTTC
AACACAGCCATCGCCGAACAGCGAATCGATTGTCTCTGAACCGAGCACGC
CTTTACTGACAACTCAATCAGCTGAGAAAATAGACGATAGAAATCGAACA
GgGGTAGTGCGGACACGGTCAACTCCACCTTGTATCGATTTGAGCAAAAT
CTCTGTTGGCGTACCACGATTAGAACTTTCTATGAAGTTGGACGCTATTT
TGTTGAGTTCCGATACTGCGACTGATTCCGGAAATGATTCCGGAACTCAT
ACATCATCCGGTAACAGTTCTCTAAATAATTCGATGAATACAGGATCGCC
GAGAAGTCCGGGCGGCCGCGTGGCGACATCGTTGCTGAAGCAAGTTCACG
TGGACGTGATGAAAAGACAGGAAGAATCGGACAGAGATACTGATGCCAGT
ACAAGCAGTTGTGACGTTTCTCCGCGCCGCTTCTTGTCGGCCTCGTTCAC
TGCGACGCGTGTGCCAAGTCCGAAGCAGCCATCTCCGCTAGTCCTCGATT
CTCTCTCCATACAATCAGACGATTCCGCTTCAACACAGCCATCGCCGAAC
AGCGAATCGATTGTCTCTGAACCGAGCACGCCTTTACTGACAACTCAATC
AGCTGAGAAAATAGACGATAGAAATCGAACAGgGGTAGTGCGGACACGGT
CAACTCCACCTTGTATCGATTTGAGCAAAATCTCTGTTGGCGTACCACGA
TTAGAACTTTCTATGAAGTTGGACGCTATTTTGTTGAGTTCCGATACTGC
GACTGATTCCGGAAATGATTCCGGAACTCATACATCATCCGGTAACAGTT
CTCTAAATAATTCGATGAATACAGGATCGCCGAGAAGTCCGGGCGGCCGC
GTGGCGACATCGTTGCTGAAGCAAGTTCACGTGGACGTGATGAAAAGACA
GGAAGAATCGGACAGAGATACTGATGCCAGTACAAGCAGTTGTGACGTTT
CTCCGCGCCGCTTCTTGTCGGCCTCGTTCACTGCGACGCGTGTGCCAAGT
CCGAAGCAGCCATCTCCGCTAGTCCTCGATTCTCTCTCCATACAATCAGA
CGATTCCGCTTCAACACAGCCATCGCCGAACAGCGAATCGATTGTCTCTG
AACCGAGCACGCCTTTACTGACAACTCAATCAGCTGAGAAAATAGACGAT
AGAAATCGAACAGgGGTAGTGCGGACACGGTCAACTCCACCTTGTATCGA
TTTGAGCAAAATCTCTGTTGGCGTACCACGATTAGAACTTTCT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000140_pilon | genome | sc0000140_pilon:625396..634584 + |
|
