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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000140_pilon:625396..631877+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.15648.6.p1 ID=MSTRG.15648.6.p1|Name=MSTRG.15648.6.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6482bp|location=Sequence derived from alignment at sc0000140_pilon:625396..631877+ (Clytia hemisphaerica_ch_hm2_pilon)
tttttttacttagaAATATCTATGTATGGTAATGGAGTTTGTCGAGGGTG
GAGATTGCGCTTCGCTCCTGAAGAACATCACCGTTTTTCCGTTCGATCTT
GCAAGGCGGTATTTCGCGGAAACACTCCTCGCGGTGGAATATATTCATGA
TTACGGAATCATTCATCGGGATTTGAAACCGGATAAGTAAGTTGTGGCCA
TAGTTCTTCTATATGGTCCTGCTACAGGTGCCTCTgacaactatagacgc
ttataATAGGCTCTCAATCAGCACCTTGTTGTACCAACTAACCAAGGGTT
GACTGAGAAAAGTGACCTACTTTCAGAAGCTCATTTTTTAACTAGCTAGG
AAACTGTTCTTTTTTCGATACAACGTGGCAGCGGAATCTTAGTACGCGAA
GCGAAATCTTACCCAAACGGACGGTAGACTGTGATCGTTTTAAAacgttt
tcaaaattgattcctTCCCTTTGTTCCAGTCTATTGATAACGGCTATGGG
ACATATCAAGTTGGCAGATTTCGGACTCTCAAAAGTTGGTCTCATTAACA
GTAAGTCAGTATGTTGTTTGTTTTCAATGCCCATGTTACCATGCCAACCT
ATTTGGTGATgcctggagagtcttctgagaacttttaacattttccaccc
aatacgtcacttaaacaataaaaaaagtgacGTACACTACTAACCCAATC
ACCATTCCTCACGGACATCTCCATTCCTCTTCTATTCTTCACCATTCCTC
AgcgttcctcgaacgttcctcaggaatagAGATATTTCAACTTTGTTTTA
GCATTCCTCATCcattcctcgaacgttcctgaGGAATGGACATTTCTGAC
GTAATTTTTAGGtgttcctcactcgttcctcgaacgttcctcaggaatgg
acttTCATGACGTTATTTTCAAgcgttcctcactcgttcctcaggaatgg
acatttctgacgttatttttaagcgttcctcactcgttcctcaggaatgg
acatttctgacgttatttttaagcgttcctcactcgttcctcaggaatgg
acatttTTGACGTTACTTTTAAGGCGTTCCTCACTACTTCCTCGAACGTT
CCCCAGGAATGGATGACGTTATTTTTTAGCGCTCCTCActcgttcctcag
gaatggagatatttcttcttcactttatCGTTTATCATCTTTTCCTCACA
CGTTCCTGAAGAATGGGCTTTCATGACGTTATTTAAAAGTGTTCCTCATT
TGTTCCtcaggaaaaaacattttcggaGCTGTTAATACATTTTCATGGAT
AAgatattcaatatcaaaaacttttatgtTGCTTAAAATTTTAGGCTCTT
CCTCCAGAGAAAAAGAGGGCTAGAGAAATACGTTTGTCCTTTAGAACACA
TTAGTAACGGAAGCTCACAAACAACTAGGGCttttttttAATCCTGTGTT
TTAAGTTCATTGGAAATCCCAACCcgatggaggtcctataaataaaCCCA
TGTCCGtgcgttagttaccagcttttctcaagattgacTTATTCAaagtt
tctgatttttgcacaaaggtgcatgactataaaccctcgaatgtgacaga
gcctgattggatcatgattttttgcacgaaagtagggtattatcgtaggt
aaaagatggctgaagcagatatttttgcaaaaaagatttttcggcTCATG
AGGAACAATAAAGTGAAAAGGAAATATTTCCATTCCTGGGGGGccttcct
gaggaacgttcgaggaacgagtgaggaacgcttaaaaataacgtcagaaa
tgtccattcatgaggaacgttcgaggaacgagtgaggaacaCCTAAAAAT
TATGTCAGAGATGCCCATTCCtcaggaacgttcgaggaatagatgaggaa
tgctgaaacaaagttgaaatatctctattcctgaggaacgttcgaggaag
tAGTGAGGAACGCTTAAAAATTACGTCAGAAATATCCATTCCtcaggaac
gttcgaggaatgGATGAGGAATGCTAAAACAAAGTTGAAATATCTCTATT
CCtcaggaacgttcgaggaatagatgaggaatgctaaaataaagttttga
aatatccaTTCCTTAGAAATGTTCGAGGAACGCTGAAGAATGGTGAAGAA
TAGAAGAGGAATAGTGAGGAATGGGGATGTCCATGAGGAATGTTGATTGG
GTTAGTAGtggtattgggtggaacaaaacagaaaagttgcataatttcgt
gaaggcgttgcagtggtgcatatcatgaatagagccTACTTCACTTTCTT
AGTTTTtgtgatgacgctgagtccatcCAGTGAAGTAAACTAAGAGCAAT
TGACGAAGgcgccattttgaaagaaaagaccAAAAATTCGAAATAACGAG
AAAACTACTTCCACTCAAACAAATGAAATCTTCAATGAAAAACAACATGA
ATAATAGATTTTCGGTACCCTAGACAACTAGAGTCCAACGTACTGTTTTT
TACTGTATTACGTTCAGCAAAGCTAGGAAAATGATAGCTGCAATATTGAG
TTGGGTCATAAAAAAGGGTATCAAGGacataaaaattgtaaacacaCAGA
GGATTGGAGTATCCACGGAAGAGAAAGAGGAGGAAGGGAGGTATCGACCA
ATCAAGGTAGTTTTCGAAAATAAAGAAGACAAGAACAAAGTCTTGAGAAC
CATCACGACATACAAAGGCCCTCCTTCATCCTATCGAGCAACAGAAGACC
TCACAATTATTGAACGATTGACAATCAAAGAATTTAGCAAGAGAGCACGC
GAGCTCAAcgctcaaatgaaagacaaaactATTCAATTTAAAGTCAGGGG
AAGCCCCAGAACAAAATTATACCTAAAGAAAACTGTAACAACAAGCGTTT
GTAAAAAGATAGGTTCTTAGAGGCCCACCGCGAGCCTTGAACCTCAATCC
TTCAATAAatttaatcgcgccatccagccTTAAGTGGAAGCCGGGCTAGC
CATGGTACAGCTTTAATTAAATGTTTGAAAgttaccaaaataaaaaatga
aaagagaaaatttaaaagttaattCATAATTATAGTGAagttataccggg
tgacccacgaaaaaattcagacgtttctcgacttcttgaggccgaacaaa
tgtcccaatgtgcttggagtttagatatttagaaagtagatatcctaact
taaaatttgagctatcactttttaaatttgatcaatttgttctctactta
tgagcttttaaagtcaaaattcactttacggaaagtgtaaaaaacacgta
aaaaaggggtatcaaatttttgatatacagtttttgaaaaaaatctgaaa
aatctaaaaaagcgccaatttttataaaaaccagccttgttttaaacaag
aattacttttaaaggtgtttttattaattattaatgtcataaaactcgtt
aaataagtcaatttgtaaatgattttctaattgattgcataaatttaata
cctcttttttacgtgttttttacactttccgaaaagtgaattttgacttt
aaaagctcataagtagagaacaagttagtcaaatttaaaaagtgatagct
caaattttaagttaggatatctactttctaaatatcaaaactccaagcac
tttgggacatttgttcggcctcaagatgtcgggaaacgtctgaacttttt
cgtgggtcaacCGGTATAcactgaagaaaatacaaactagTGACTAAAGG
CTTGGGggcacgagaagtttttttctcgttggtgcaatgcaacatgcacc
gtcccaccaacctgaaacgctttctcgtgtcttcaccccatttttctttc
ttgataaaaaaatgtaaaaggtaaaaaaaatgtTCCAGAGTCAGACAAAG
ATGTGACATATTAGAAATGCTCAATCAAACACAAACTGAAGCAActcaag
aattgaaaaatatttcttcaacttttttctaGTGACAACGAACATTTGTG
AAGAGACCGTACAACAGTTCAAAGATGTTCAAGTATTTGGCACTCCGGAT
TATATCGCACCCGAAGTTATCTTACGGAAAGGATACGGtaaagatgtttt
tttataaacacagaGTGTTAAAGCCCATCTATGATCTATTAGAGTAATTC
CTacgagatttctattgtaatactcccgaaacaatcccacaatacatcgc
ttttttagaaaaatcaaaaactccgataagatctattgacTAATAATGAT
GTATTATACCAAAGTtcaactccgataagatctattccGTTTTATTTCCA
GGTCCTGCTGTCGACTATTGGTCTCTTGGGATTATCTTGTACGAATTTCT
GATTGGTGTTACTCCGTTCTTTGGCGAAACTGTCTCTGAAGTTTTTGATA
TGATTTTAACTGGTAAGTTGCCAACATTACACTTCGATTAAGAAGGgagt
ttatctaaagaatcctgcattactaaaaatagacaaaaaaagaacgacat
atttcgccgtccacaaccccggccgaaagtgactgtactccgacagattc
attcctctttgtttatcacgggaattaactacatgtggtttaaaagaacg
acaaattatgcatgcgtgttacaatgcaggattctttagaggaacagact
ggaGGGCTGTGATGAAgctgtaccattttattttacgAAATTCCTCGACT
TACAGCCAGTTATTATAGCTATTCATGAGTCTGTTTGCTTATTCTGCAAA
AAACATTTcacagctccattaaaaacgcAGACAATTCATTTCAATTCTTA
TTCGACACTTTGAAGTCAAAACATTGTAAACTCTTTGGTCATTAACACAT
TGAAGTGTTGAATCGAACAATTCAGTTACGTCACGcgctatcttttgttt
tgatgattggttgaataaCTGCAATCTTTATGCAAGCTCAGCGTTTTTGT
AGCAGCGATTCAAACTTCGGAAAAcataatgtcaatctggctttaagTTG
CAGTTCACAGCCCTGACTTTCTGCTTTTGGAAATTATTGAAATCGAAGAA
TCGACAATAAGTATGAGATTCTTTGggtgataaaaaatttgttttcatta
ttGATATTGAGATCAACAGCAAtcagctacacgtttttttataagaacaa
actatataagagcataaggcttcgatggtcaaaatactaaaacaagttaa
gaacattttaaggcttcgtggaacattcgaaggcttcaagaaTTGTGGAT
GTTCTTCTTTCTGGTTATTCTTAGCGAGTGTTTTATGCTTCTATATGAGG
AAGATTAAGGTTCTAATCGTTTTAagagacaaacaaacaaacaaagtttC
TTTAGTCTAGCCTTTGGAAAAGTTTTCGgaataaagactttgttttttaG
TGAGAGTGagatcgtttgcttactcatcaatttcaatttcagtctacaac
cttttttactttgaattgacacggatgtggagcaaaattgggcagaacaa
ggaaaagaaaaatttgtttttgcttatatcagcacaatataacaataagc
TGACACTGCCtcgatatgaaacatgtgtttGATATTaaacgggaacactt
gtgtaaaaactaAACCTTTAAATTATACATTTCATGATAACTCTTCTCCC
TTTTCAGGTGAAATTGAATGGCCTGAGGGTGACGAAGCCTTACCTGACGA
AGCAACCAATATCATTAAACACTTACTGGTTCGTCAAGCGACCGAACGTC
TAGGAGCGAACGGAGCGGCGGACGTCCGCGCGCATTCCTTCTTTCAAAAC
GTCAATTGGAATTCTTTGTTACGTGAGAAAGCAGAGTTCATCCCAGTGTT
GGATAATGAAGAGGACACGAGTTATTTCGATAGTAAGTATCATTGGGTTC
gattcacagatatcttatataaaacactagataatGTTATATTGTCTTCA
GCTGAAGCAAAAAATTTCGCCAACCTTAATAAGCAGACCATCGAGACTGC
TTTGTTTGAATgaattgccggtaccgaactgtgGTCTAATTTCAGCCAAT
ATGGATCGTTACAACCACATAAGATCGCGTCAGCCGCTAGATCACATTAT
CCATAGTAACCTCTGTTATTTCTCATTCTAGCGCGCGAGGATGGTTACAA
CCACTTAAGATCGCGTCAGCCGCTAGATCATATTTCCTATAGGAACCTCT
GTTATTTCTCATTCTAGCGTGCGAGGATGGTTACAACCACTTAAGATCGC
GTCAGCCGCTAGATCATATTTCCTATAGGAACCTCTGTTATTTCTCATTC
TAGCGCGCGAGGATGGTTACAACCACTTAAGATCGCGTCCGCCGCTAGAA
CATATTTCCCATAGTAACCTCTGTTATTTCTCATTCTAGCGCGCGAGGAT
CGTTATAATCACTTAGTATTCTCATTGAGCTCACCTTAGGACACCTGCGT
TATCGTTTGACAGATGTGCCGCCCCAGCCCGC Coding sequence (CDS) from alignment at sc0000140_pilon:625396..631877+ >MSTRG.15648.6.p1 ID=MSTRG.15648.6.p1|Name=MSTRG.15648.6.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4338bp|location=Sequence derived from alignment at sc0000140_pilon:625396..631877+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTAATGGAGTTTGTCGAGGGTGGAGATTGCGCTTCGCTCCTGAAGAA
CATCACCGTTTTTCCGTTCGATCTTGCAAGGCGGTATTTCGCGGAAACAC
TCCTCGCGGTGGAATATATTCATGATTACGGAATCATTCATCGGGATTTG
AAACCGGATAATCTATTGATAACGGCTATGGGACATATCAAGTTGGCAGA
TTTCGGACTCTCAAAAGTTGGTCTCATTAACATGACAACGAACATTTGTG
AAGAGACCGTACAACAGTTCAAAGATGTTCAAGTATTTGGCACTCCGGAT
TATATCGCACCCGAAGTTATCTTACGGAAAGGATACGGTCCTGCTGTCGA
CTATTGGTCTCTTGGGATTATCTTGTACGAATTTCTGATTGGTGTTACTC
CGTTCTTTGGCGAAACTGTCTCTGAAGTTTTTGATATGATTTTAACTGGT
GAAATTGAATGGCCTGAGGGTGACGAAGCCTTACCTGACGAAGCAACCAA
TATCATTAAACACTTACTGGTTCGTCAAGCGACCGAACGTCTAGGAGCGA
ACGGAGCGGCGGACGTCCGCGCGCATTCCTTCTTTCAAAACGTCAATTGG
AATTCTTTGTTACGTGAGAAAGCAGAGTTCATCCCAGTGTTGGATAATGA
AGAGGACACGAGTTATTTCGATACGCGCGAGGATCGTTATAATCACTTAG
TATTCTCATTGAGCTCACCTTAGATGGTAATGGAGTTTGTCGAGGGTGGA
GATTGCGCTTCGCTCCTGAAGAACATCACCGTTTTTCCGTTCGATCTTGC
AAGGCGGTATTTCGCGGAAACACTCCTCGCGGTGGAATATATTCATGATT
ACGGAATCATTCATCGGGATTTGAAACCGGATAATCTATTGATAACGGCT
ATGGGACATATCAAGTTGGCAGATTTCGGACTCTCAAAAGTTGGTCTCAT
TAACATGACAACGAACATTTGTGAAGAGACCGTACAACAGTTCAAAGATG
TTCAAGTATTTGGCACTCCGGATTATATCGCACCCGAAGTTATCTTACGG
AAAGGATACGGTCCTGCTGTCGACTATTGGTCTCTTGGGATTATCTTGTA
CGAATTTCTGATTGGTGTTACTCCGTTCTTTGGCGAAACTGTCTCTGAAG
TTTTTGATATGATTTTAACTGGTGAAATTGAATGGCCTGAGGGTGACGAA
GCCTTACCTGACGAAGCAACCAATATCATTAAACACTTACTGGTTCGTCA
AGCGACCGAACGTCTAGGAGCGAACGGAGCGGCGGACGTCCGCGCGCATT
CCTTCTTTCAAAACGTCAATTGGAATTCTTTGTTACGTGAGAAAGCAGAG
TTCATCCCAGTGTTGGATAATGAAGAGGACACGAGTTATTTCGATACGCG
CGAGGATCGTTATAATCACTTAGTATTCTCATTGAGCTCACCTTAGATGG
TAATGGAGTTTGTCGAGGGTGGAGATTGCGCTTCGCTCCTGAAGAACATC
ACCGTTTTTCCGTTCGATCTTGCAAGGCGGTATTTCGCGGAAACACTCCT
CGCGGTGGAATATATTCATGATTACGGAATCATTCATCGGGATTTGAAAC
CGGATAATCTATTGATAACGGCTATGGGACATATCAAGTTGGCAGATTTC
GGACTCTCAAAAGTTGGTCTCATTAACATGACAACGAACATTTGTGAAGA
GACCGTACAACAGTTCAAAGATGTTCAAGTATTTGGCACTCCGGATTATA
TCGCACCCGAAGTTATCTTACGGAAAGGATACGGTCCTGCTGTCGACTAT
TGGTCTCTTGGGATTATCTTGTACGAATTTCTGATTGGTGTTACTCCGTT
CTTTGGCGAAACTGTCTCTGAAGTTTTTGATATGATTTTAACTGGTGAAA
TTGAATGGCCTGAGGGTGACGAAGCCTTACCTGACGAAGCAACCAATATC
ATTAAACACTTACTGGTTCGTCAAGCGACCGAACGTCTAGGAGCGAACGG
AGCGGCGGACGTCCGCGCGCATTCCTTCTTTCAAAACGTCAATTGGAATT
CTTTGTTACGTGAGAAAGCAGAGTTCATCCCAGTGTTGGATAATGAAGAG
GACACGAGTTATTTCGATACGCGCGAGGATCGTTATAATCACTTAGTATT
CTCATTGAGCTCACCTTAGATGGTAATGGAGTTTGTCGAGGGTGGAGATT
GCGCTTCGCTCCTGAAGAACATCACCGTTTTTCCGTTCGATCTTGCAAGG
CGGTATTTCGCGGAAACACTCCTCGCGGTGGAATATATTCATGATTACGG
AATCATTCATCGGGATTTGAAACCGGATAATCTATTGATAACGGCTATGG
GACATATCAAGTTGGCAGATTTCGGACTCTCAAAAGTTGGTCTCATTAAC
ATGACAACGAACATTTGTGAAGAGACCGTACAACAGTTCAAAGATGTTCA
AGTATTTGGCACTCCGGATTATATCGCACCCGAAGTTATCTTACGGAAAG
GATACGGTCCTGCTGTCGACTATTGGTCTCTTGGGATTATCTTGTACGAA
TTTCTGATTGGTGTTACTCCGTTCTTTGGCGAAACTGTCTCTGAAGTTTT
TGATATGATTTTAACTGGTGAAATTGAATGGCCTGAGGGTGACGAAGCCT
TACCTGACGAAGCAACCAATATCATTAAACACTTACTGGTTCGTCAAGCG
ACCGAACGTCTAGGAGCGAACGGAGCGGCGGACGTCCGCGCGCATTCCTT
CTTTCAAAACGTCAATTGGAATTCTTTGTTACGTGAGAAAGCAGAGTTCA
TCCCAGTGTTGGATAATGAAGAGGACACGAGTTATTTCGATACGCGCGAG
GATCGTTATAATCACTTAGTATTCTCATTGAGCTCACCTTAGATGGTAAT
GGAGTTTGTCGAGGGTGGAGATTGCGCTTCGCTCCTGAAGAACATCACCG
TTTTTCCGTTCGATCTTGCAAGGCGGTATTTCGCGGAAACACTCCTCGCG
GTGGAATATATTCATGATTACGGAATCATTCATCGGGATTTGAAACCGGA
TAATCTATTGATAACGGCTATGGGACATATCAAGTTGGCAGATTTCGGAC
TCTCAAAAGTTGGTCTCATTAACATGACAACGAACATTTGTGAAGAGACC
GTACAACAGTTCAAAGATGTTCAAGTATTTGGCACTCCGGATTATATCGC
ACCCGAAGTTATCTTACGGAAAGGATACGGTCCTGCTGTCGACTATTGGT
CTCTTGGGATTATCTTGTACGAATTTCTGATTGGTGTTACTCCGTTCTTT
GGCGAAACTGTCTCTGAAGTTTTTGATATGATTTTAACTGGTGAAATTGA
ATGGCCTGAGGGTGACGAAGCCTTACCTGACGAAGCAACCAATATCATTA
AACACTTACTGGTTCGTCAAGCGACCGAACGTCTAGGAGCGAACGGAGCG
GCGGACGTCCGCGCGCATTCCTTCTTTCAAAACGTCAATTGGAATTCTTT
GTTACGTGAGAAAGCAGAGTTCATCCCAGTGTTGGATAATGAAGAGGACA
CGAGTTATTTCGATACGCGCGAGGATCGTTATAATCACTTAGTATTCTCA
TTGAGCTCACCTTAGATGGTAATGGAGTTTGTCGAGGGTGGAGATTGCGC
TTCGCTCCTGAAGAACATCACCGTTTTTCCGTTCGATCTTGCAAGGCGGT
ATTTCGCGGAAACACTCCTCGCGGTGGAATATATTCATGATTACGGAATC
ATTCATCGGGATTTGAAACCGGATAATCTATTGATAACGGCTATGGGACA
TATCAAGTTGGCAGATTTCGGACTCTCAAAAGTTGGTCTCATTAACATGA
CAACGAACATTTGTGAAGAGACCGTACAACAGTTCAAAGATGTTCAAGTA
TTTGGCACTCCGGATTATATCGCACCCGAAGTTATCTTACGGAAAGGATA
CGGTCCTGCTGTCGACTATTGGTCTCTTGGGATTATCTTGTACGAATTTC
TGATTGGTGTTACTCCGTTCTTTGGCGAAACTGTCTCTGAAGTTTTTGAT
ATGATTTTAACTGGTGAAATTGAATGGCCTGAGGGTGACGAAGCCTTACC
TGACGAAGCAACCAATATCATTAAACACTTACTGGTTCGTCAAGCGACCG
AACGTCTAGGAGCGAACGGAGCGGCGGACGTCCGCGCGCATTCCTTCTTT
CAAAACGTCAATTGGAATTCTTTGTTACGTGAGAAAGCAGAGTTCATCCC
AGTGTTGGATAATGAAGAGGACACGAGTTATTTCGATACGCGCGAGGATC
GTTATAATCACTTAGTATTCTCATTGAGCTCACCTTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000140_pilon | genome | sc0000140_pilon:625396..631877 + |
|
