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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000140_pilon:378130..387698+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.15632.3.p2 ID=MSTRG.15632.3.p2|Name=MSTRG.15632.3.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=9569bp|location=Sequence derived from alignment at sc0000140_pilon:378130..387698+ (Clytia hemisphaerica_ch_hm2_pilon)
tttatttattttcttttagacgattaaaaatatgaaatactaaaacaatt
ttaacttacttaaaagaatgaaaatatgatggccaatgaaaatgaagaat
gttggaaacaatgaaaacataatgGTCGCAAACAGAGAAGAGACAATAAA
CAAAGAAGAAGTGAAATctcctccccaatcctcctcctcctcctcctccg
aAGTGTCAAAAAACGATAAAAGCCAAAAACACCAAGAAGCCACTGTAATG
CAATCTCTTTCTCAAGGCGTCAATACTGATAGTGAATTGGCAATACACGA
CGAAATGCAAGCATGTCAACAAAAAACTGTAGTAGAACCTCCTCAATCTT
TCGAAGAAGAGGTGTCAAAACACGATGAAAGCCAAAAATACCAAGAAGCC
ACTGTAATGCAATCTCCTTCTCAAGGCGTCAATACTGATAGTGAATTGGC
AATACAGGATGAAAGCCATCAACACCAGCAAGTCACTGTAGTAGAACCTC
CTCAATCTTCCAAAGAAGCAAAAGTGTCAAAACTCGATGAAGGAGGTCAA
GAAAACCAAGGAAACATTCAATCCGAAGACCAAGGTTCAGATACTGATAA
TGGTATGGTATACTGTTCTATCTGAAGGAGGgactgttttatttttcatt
tgtaattttcGGTCCATTATGTTCGAGATCTCATCAAAAAACGGATCCCT
GGTATTGCACTTTTCTTTGTGATTGGAATTATTATAAGtttttttCTTga
gcaattttataagaacagaaggctAAAATTGGGAGAAAAAGATACCCTGT
CCGTTCCAAGCTTCACATCCCCGTACTTATCTCTTTTTGCCTACAAAGTA
CTCTTAGTTACCGTATTATTTCGAAtaacgcccggggcgtttattaattt
ttttttgattttaggaggggcgtttattcgagggggtgtttaaaagaagg
gggcatttattaaattatttgagtCTAACgttgaatattttaaaagcaAA
TCTACTCTTTGTTTTAGTTCAATACCAAGATTTCAGTGCAAATTTCTTTG
GGTCAGCGACTAAAATTGCATCAAAACTGATCTGGTTAGAAAAAAGACTA
AAATCTTTTCTAATCAAAACTTGTATCAAAGTATTTAAatcacaagtttc
taataaatgCCCCTCCCCTAGAGGGGGCGTCAATTCGAAGGGGTCGTTTA
TTTCAGGGGGCgattaaaagaagggggcgtttttTCGAAGTAGATCTCTC
TGATTCGATCTTCAATGGGgtcaagaattttcttcaaattaaaaagattc
aaattaccGTGAGTAATTAATGATTAATAAttaaggttcgaattagagat
tGTTAGCCGGTTTGTTTTTTAACGCGATCTGTACGATTTTTTAAGCAATG
CAATTGGCTCTTTTCGCATACCGACGAGCTTACAAGTATGACGTcagtta
ttttcaaataaaatggaCACTACGTTGACATCATTTCCATCtctttttca
agtttattttATCGTAAATTCACACAAGTCTTTCTCTTTTTCAGTCGTCT
TTCCCAGTATTCGCGCTATAAAGTGCAAACAAAAAGAGACAGTTAACAAA
GATATGTCTGGTTAGTGAGGGCTGCACTGATAAATATCACCCGAGACGCA
ACAATGCTTCCGAGTCATTATTAGTAGGGGACCAATCCTTAggatccgtg
acatcttttatgcgacgcaaccGCATGTGGTTAGTTCGAAAGTAGGAAgg
ttttaaagacttttttgagagggggcccgcgaattaggcccggcaaaagt
ttttatgactAAAAGACTGACGTTTACAGACaaaactgtaagggtaaaaa
atgggtaaaaaattgacgttttttaaaagtcgaatttgaaagaaatggAT
GAGACCatcggaaagagcatgaaattctgagcaaaaaagtataaTACAAC
AAGTCTCTTACTCGAACGCACGAAGAAATACGGCCATCTAAAGTTTGAAA
TTCTGTCAGATGGAGTACGATTGGCGTCAAATTTTGTATGTCACGGATCC
TAAggattggccccctactatattAGAGTATTAGAGTTAACtgtttttga
aatcaaattaaacccttcaaaaaatcatttccactttttttAGTTGTATT
GGAGGTGGGAGAGCAACATCAgattattgtttttgaaatcaaatttaacC
CTTCAAAAACCATTTCCactttttttagttgtgttGGAGGTGGGAGAGCA
ACATCaaattattgtttttgaaatcaaattaaACCCTTCAAAAAACCATT
TCCACtttttttAGTTGTATTGGAGGTGGGAGAACAACATCAAATTATTG
TCCAACAGAATGACCAAGAGCTCATCTTTTACGTCACTTATGAAGAAAAT
GTGGATGTAGATGTAGAAGGACAACCGAACTGTGGCGATGGAGAATATGG
TGGAACTCCAGTCGAACAGGTTGGTGCAttacacctatcaaccctttGAG
CGGCGAGATTGGCTTTTTAGGGGACTGGtgatgaatttacaaggaagaTT
TGCTCTCGGTGCACGGCATTTAGGCATTAGGCTGCAACCAAATCAAACTA
AGCAAATTCCCACCAAAACTCTTGAAAAAAGTATTAACCAAACCTAAtcc
atttcaaagaatgaagtACTTAAAGAGTTTTTCACGAGGGAGGGGGCGGG
GCGGTTTCTGCTGAGGCCCAGaaaaaaaCTGACATCACAGGGAAAAAATA
GACCAAGTTTTATACGTCGCGTGAAAGATGTCATTGGTCTAAGGGTTTGA
TAGGAGTTAATACTTTTTTATTACTCTATCATTTAGATTCTCCTGTTCGA
TCCAACCCAAGCTGTCCAGCATCATCATGAAGACGAAAGCAACGCCAGAG
ATGAACGCAAAACCTTGGTCAATTCTCCAAAACAACAGGGCAACAATGAA
AATGAAGCCAACGACGTCGAAAACATCGAGAACCCTTGTATAAAACTCCC
AAAGCAAATTATTGGAGCTCAAACCATCAATGAAACTGTAACAGGGGCTT
CTTGTATTAAACTCCCAAAGcaaattgatgaaaatctaGCCAAAAGTGAT
AACTTTGAGAAATCTTGTACAAGACTTCCAAAGCAAGATATTGAAACCGA
GGTCAACAATGAAACTGTTGCTCAAAGTGACGACACTGATGCTTGCTGTC
TAAATCTTTCAACTCAGATTAAAGAAATTGAAGTCAAAGTTAAAACTCGT
ATGAATGGCACTGAGAAATCATTCGTAAAACTCCaaaagcaaaatattga
aaatggcATCGAGGCTAAAACTCGTATGAATGATAGCACTTGTATAAGAC
TTCCAAAGCAAAATATTGGAACTGGAATCACCAATGAAAATATAGATGAT
ACTACTCAGACCTCTCGTATAACATTTCCAAAGCAAATTAATAAAACAAA
AGTCAAAGATGTCACCTGTGAAGAGAATGATGGCACTGAGACATGCTGTA
AACTTCCAACGCAAGATGACCAACGCGGAGATGAGCGAACAAGAAAACtc
gataaaaaaataaataaagaagaCATAATCGATGATCAGGGTTagtaata
tctttaaaattatcttttagaattctcgccaaattttctttttaaatggg
ctgttccattaaaaaatcatacaagggggggggggtggacgaaccttttc
aagtcaaaaaaaattattgcaaaTGTGTGAATGCCCcctggaaaatagca
aaatttgcaaaaatactcTTTTGATACGGCAAAGTGAGTGGACGAACAAA
ACTCAGTcttttaaccccctggaaatattagaataacttttttctccctg
taaaaatgaagaaaaaaaacaccctcTGGAAGTTTCCCTCTAGAAATGTT
CGTCTCCCCTGTATGGAAatgaaatggaatggcccaataaaTACTTACTG
TCACTGACTGTCATCAATTTTTCcaacaaaatcttttgatacttttgcCT
GTGGGAATTTGCTCAAGACTTTACCAAAGACCTGAAGGTGCTTCTTTCAG
TAGGCCTGTGTATGATCTGGGCTcttggcatccactaacggattcgtatT
TTTTATAATACTAATAGCAGTTTTGTAGAGGTCAGCGATTTAGAAACTAT
ATATGATTATTAAGATCAAGCTAAAATACCTTTCCTTTGGTTTGCATGAA
ATTACAGTAGTTTGAATAACATGACATTTATCATCCTAAGCTCCCCTTCT
TGTGAACATCAAGAGCATGTATATGAAATACACACTTTGATGTAAAACAA
TGTCTTAGACAACATTAAGGGGCCCTCAGGAAGGCCATGCATCATCAATA
GGACTGTATCATTGACTGTGACTGCTTGACTCATACGATGCTCGGCTTCC
GttgagcaaaaattgttttgtGTTCTGATGTCTATTTCATGACATGAAAA
TAAACTATCagtatgttttgaaaagtttcaatCGAAGGTGCGACGAGTTG
ATGAGTGAGTCCAAGACTGATTTGAAGATTTCAAccccaaatatttttat
acccTTCTTAAAGAACTTTCTAGTATTATTGCACCACTACTTTTAATAAA
CTATTCAACAATACTATCTAATACAAAAAGCCTACAGATTTATAGATCTA
TCTAGAACTCTTGGTAACATGGTCCTACCTTGGAACTTTCTAGTTTTAGT
TTTATAAATGTAACTATTTTTGCACCATTTCAAGCGAACGTAATTTTCTA
GAACTTTTATTTGCATATTTTATCTCAAACAGCTCTTATTTACATCTTAT
TGCGtgatttcttttaatttattcaCTGGAATGTGAATTAATTATCATAC
ATAAATTATGAGTATTTTCTTTTCTGATTATCtaatcaaaattcaacaaa
attgatgatttatttataagcaaCTTAATTGTAAGTTATTTGGAAAACAA
AATACAATCATTTGAATCTTTAAACAGCAATTTTGTATACATTTCAAGAA
GAATACTTTAAATTTGAACCAACTTGAGCTTGTGCTGTAattggtcagcc
ccggtgacccttcaaatctctttcacgatttttttcttcgtttaaGACTC
AACttttaattccgatttcggattattttcggaaaacaagttaacgggaa
aactttggcgcgaaaaatattttttattggaagagaaaagaaacatatAA
CTTCATTAAAAGATTTGCGCATAATGGCcataataataaaagaacactat
aattaaaaagaagaaagtgaaatttttttgtttgtttattcaataaattg
aaagaagcattgtaaataaatagagtgtaaaagaaagttttttatgattg
gttttgaggctttcttgtctggagggagagtttttgtgtgtaagaaAGGA
ACGTCAAATTGTGGCGTAACATAAACTTAgaatcgtcataacttttgatt
gagttatcgaaactggacggaatttcctaagcagtttcctcaatataaaa
tgcccCTATTCATTCACATTATACTAGGTTCAACACACCatttaaatcaa
tctgaatcattTGACTATTCAAgtgattacacgcttttttttataagaat
acactttataagaatgtccatgatgaaaatggctaaaaaattaagaaaaa
ggctaagaatatcaccaattttgctactcaagctaagaatgccattttac
aGTTTTTacagcattttcaattataaattgtcaattttccaaagtaaggc
tcactcctttcacaaaaatgtcattttacgcttgagacgtatgtacgaAA
TGTTAAGTCTAgtcttaacctaagaatgctataagaatattttaggacga
ttttcccaaaaaagttaagaatatccatgatggtatggatttacaccatt
cttataaaaaaagcgtgtactaaGTAGACAGCTAACCGTATCCCGGGgga
ggcaaaattgggtacggggacgtgccgcttgtcagggttccttttttagg
ctctgaagatatctgacaggttcccaaattttcagggtggaaacagaaaa
tttttcgttctgacagggttatcccaattttgccAaaaattcatatctga
cagggtccacttttcaaactccagcggcacgtccctgtCGGCCGAAGGtt
aatgccccccccccgggaaccgTACACACTCAACTATAAACTAGGGGTGG
CCTtgactggagaaaaaaaaataaatcaacataaaaatgccaaaaatgaa
caaaagtgACGAAAGCCGCAGTGAACATATTATAAAGCGGCCGCCTCGGA
TACTTTCTCAGAGCATAAAGAACAGGTTTAAGACATTCTAACAAAAAGAT
TTATGTGAAATTCCAAGGATGAAATAATCTATCACATATCTGTCTGCTTT
GGACAAATTCAACtttgtgttaaacttttttttgtctgaagtttcaacca
aaatgagcttttcaacctctttggctttaacatcaaTTAGGTTTCTTGAT
TGTACTTCCTTCTAATCATTTTAAGCTTATTGGGCTGACCTTCCAGCGCA
GCTGGTTTATTGACTCTTGATTTGTTAAATAAATATAAATGTCTGTATAT
GTTTTTGTCAGTGGTTTTACAAGTAGTTTCTTACAACTTGATGCAAATTA
ATTCTAGAATGATTCCAATTCTGGAATGGTGAAAGAGCTTTCTGTTTATG
ATTTTATGCTTCTAGAAAGTTCTTTAAGAAgggtataaaaatatttgggg
ttgaaattttcaaatcagtcTTGGACTCACTCATCAACTCGTCGCACCTT
CgattaaacttttcaaaacatactGATAGTTTATTTTCATGTCATGAAAT
AGACATCAGAACacaaaacaatttttgctcaaCGGAAGCCGAGCATCGTA
TGAGTCAAGCAGTCACAGTCAATGATACAGTGCTATTGATGATGCATGGC
CTTCCTGAGGGCCCCTTAATGTTGTCGAAGACATTGTTTTACATCAAAGT
GTGTATTTCATATACATGCTCTTGATGTTCACAAGAAGGGGAGCTCAGGA
TGCACGATCTGCATCGATATGTATTggattgaaatttgaatttcgggcga
gaaagtcgcttttggacTGTGTGTTAAATGTAATCGAATAGTTTGGGAga
ggtttatagacttccaggctatacatgtttttcttttataagcataacgt
ttaagcatatacaggctcagtttttggtacctaaacaatggctctattat
ttgaaaacaatagaatgctaagcataatgcgagcctgatatagagACAGa
tatttgcttataaaaaatcatgtattctgagccttgttggactatttttg
aacttttggatcgtCAGATCCTAAGGTCATAAGTCTTAGGTTTAGCGTTA
AAACTCGACACTTTCAAATTAAGTAAGAGCGCTTcgaaatcgtttgtggt
tataagattttttgggggcatttccaatttttctcaaatattatgacctt
gattgaaGCTAATGCCAAAAAGTGGGGTAACTGGTACaggaagtttgttt
ttgaatcATGCGTTTTTGAATCACAGGCTTCAGTTCATCCTCTAACGAAA
AAGGTTCTTATGCATAAGTCAATATGTTGTCCTACTTTctaacggaagca
cccgaaaaaaaataacatacaggggtcaaatcccggcttttttcgggtgt
tcccgttatgaaaatgatttacgCGTATCCAGAATAGATATCAAGGGGGC
TTGTACGAGTATCGGAACAGAGTCCAGCACATAACAATAATTACTcgtca
aaataatcaaatctCTTTTGGTTTTCACTTTTCAGATCATGCAAAAACCG
AACAACACGAGGATAATCTCCAGACCAGAACGGCAGATGACGTCACTGTA
AACGAAAGTCAGTTTGTAAAAATTCCTTTAAAATCAGAAACTAAACAAAA
ACGGAAGGCCGATAATGAATCTATCTGTACAAAGAAAGAAAcgcaaaaac
aagatggcgaaCCCGAACGCAAAATGGCAAAGAAGTATAAACCTCGGACT
GGAGGAGAAAGAAAAGTCTCGATACCCCAAAAACGTGAAATAGACTGTAC
AGTCTGGAAAGCTGCTATCGACCCCACTAAAGAGAATAACAATGCGAAGG
AGAAAGTTGGGAATGATGAAGTGAAGTGTAATGTTAGTGGTAAAAATACA
GACCAAAATAAGAAAGGGAGATCTGGAATTTGTACTACAAAAAGCGATGA
GAAATTTATCGAGACCGAGAAATTTGACTGCGAACGGTgtggaaaattat
tcaaaaagaaaCGTTACTTGTTGTTACATCAAGAGAAAACGATATGTATA
CATGAGTGTAAAGAATGTGGTAAAACGTTTTCATCACAACATCAATACAC
ACTACATAAAAGGGTACACAATAACGTGCGGCCATACTTGTGCGATGTTT
GTGGGAAGCGATTCATACAGGCTTCACATTTACAAGCTCACCAGCGGACT
CATACAAATGAACGCCCGTTTATATGCGATGTTTGTGGTAAATCTTTTGT
ACAATCGAGTGGTTTGAAAACACATCTTAGATCACATTCTCAAGAACGAC
CGTATGAGTGCACAGTGTGTGAAAAGACATTTACACAATCTGGAAACCTG
AAAATGCATGTTCGAACTCACACTGCGGAGAAACCGTATGCGTGTGACCA
ATGCGACAAATCTTTCGCGATTTCATCGAATCTTACTCAACATATCAAAT
CTAAGCACACTGAAGAACGCTCGTTCTCATGTGACGTTTGTGGCCGCGCG
TTTCATCGGCGGAGTAACATGGTTGCTCACCAACAAACACATTTGggtga
aaagaaatttcaatgtGGTATCTGTGAAAAGAACTTTTCGCGCATGGACA
GTTTGAAAAGACATTTAAAGAAACATAGTGAGGCTGAACTATCTAAATGT
CAGaatataatttattttgaaataaaaactgaTGAAAGTTAAATACAATT
GAGACAATTGAGGCTCAGGGCtagtaaaatctttaaaatgtattttgaaa
ttctcgccaaattttctttttaattacgTACTGTCATCGATTTCTCCGAT
GAAAACCCTTTGATACTTTTTGCCTAGGATTTTACTCAAGATTTACCCAA
AGACCAGAAGGTGCTTTAAACTTAAAACGAATTATTGAAAACAAATCCTT
CTTTCAGTAGGCCTGTGTATGATCTAGGTTCTTGGCATCCGCTAACGGAT
TCGTAATTTTTATATACTGAAGTCTGTCacaatataatttgcagtggaGA
CAATAAAAGCTATAACTTAcgtaacttttttgataaaattcgaattagat
agcggttttgtgcttgttgaaaagacaaacaggagtggaatattagataa
tgaaaacatttaaaaaagattggaaaatttagatcgaaaatgaagaagaa
gaaaatcaactttttcaataattttgctaactatcattttcacacgagtg
acTCTTTGATCTTAGAGCCTAATGTGAAAACATTCTTCTAAGAAATTTAT
TCCATCGAAAGATATAGTT Coding sequence (CDS) from alignment at sc0000140_pilon:378130..387698+ >MSTRG.15632.3.p2 ID=MSTRG.15632.3.p2|Name=MSTRG.15632.3.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1776bp|location=Sequence derived from alignment at sc0000140_pilon:378130..387698+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaaaatgaagaatgttggaaacaatgaaaacataatgGTCGCAAACAG
AGAAGAGACAATAAACAAAGAAGAAGTGAAATctcctccccaatcctcct
cctcctcctcctccgaAGTGTCAAAAAACGATAAAAGCCAAAAACACCAA
GAAGCCACTGTAATGCAATCTCTTTCTCAAGGCGTCAATACTGATAGTGA
ATTGGCAATACACGACGAAATCCATCAACACCAGCAAGTCACTGTAGTAG
AACCTCCTCAATCTTCCAAAGAAGCAAAAGTGTCAAAACTCGATGAAGGA
GGTCAAGAAAACCAAGGAAACATTCAATCCGAAGACCAAGGTTCAGATAC
TGATAATGTTGTATTGGAGGTGGGAGAGCAACATCaaattattgtttttg
aaatcaaattaaACCCTTCAAAAAACCATTTCCACtttttttAGatgaaa
atgaagaatgttggaaacaatgaaaacataatgGTCGCAAACAGAGAAGA
GACAATAAACAAAGAAGAAGTGAAATctcctccccaatcctcctcctcct
cctcctccgaAGTGTCAAAAAACGATAAAAGCCAAAAACACCAAGAAGCC
ACTGTAATGCAATCTCTTTCTCAAGGCGTCAATACTGATAGTGAATTGGC
AATACACGACGAAATCCATCAACACCAGCAAGTCACTGTAGTAGAACCTC
CTCAATCTTCCAAAGAAGCAAAAGTGTCAAAACTCGATGAAGGAGGTCAA
GAAAACCAAGGAAACATTCAATCCGAAGACCAAGGTTCAGATACTGATAA
TGTTGTATTGGAGGTGGGAGAGCAACATCaaattattgtttttgaaatca
aattaaACCCTTCAAAAAACCATTTCCACtttttttAGatgaaaatgaag
aatgttggaaacaatgaaaacataatgGTCGCAAACAGAGAAGAGACAAT
AAACAAAGAAGAAGTGAAATctcctccccaatcctcctcctcctcctcct
ccgaAGTGTCAAAAAACGATAAAAGCCAAAAACACCAAGAAGCCACTGTA
ATGCAATCTCTTTCTCAAGGCGTCAATACTGATAGTGAATTGGCAATACA
CGACGAAATCCATCAACACCAGCAAGTCACTGTAGTAGAACCTCCTCAAT
CTTCCAAAGAAGCAAAAGTGTCAAAACTCGATGAAGGAGGTCAAGAAAAC
CAAGGAAACATTCAATCCGAAGACCAAGGTTCAGATACTGATAATGTTGT
ATTGGAGGTGGGAGAGCAACATCaaattattgtttttgaaatcaaattaa
ACCCTTCAAAAAACCATTTCCACtttttttAGatgaaaatgaagaatgtt
ggaaacaatgaaaacataatgGTCGCAAACAGAGAAGAGACAATAAACAA
AGAAGAAGTGAAATctcctccccaatcctcctcctcctcctcctccgaAG
TGTCAAAAAACGATAAAAGCCAAAAACACCAAGAAGCCACTGTAATGCAA
TCTCTTTCTCAAGGCGTCAATACTGATAGTGAATTGGCAATACACGACGA
AATCCATCAACACCAGCAAGTCACTGTAGTAGAACCTCCTCAATCTTCCA
AAGAAGCAAAAGTGTCAAAACTCGATGAAGGAGGTCAAGAAAACCAAGGA
AACATTCAATCCGAAGACCAAGGTTCAGATACTGATAATGTTGTATTGGA
GGTGGGAGAGCAACATCaaattattgtttttgaaatcaaattaaACCCTT
CAAAAAACCATTTCCACtttttttAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000140_pilon | genome | sc0000140_pilon:378130..387698 + |
|
