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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000140_pilon:378130..381776+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.15632.2.p2 ID=MSTRG.15632.2.p2|Name=MSTRG.15632.2.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3647bp|location=Sequence derived from alignment at sc0000140_pilon:378130..381776+ (Clytia hemisphaerica_ch_hm2_pilon)
tttatttattttcttttagacgattaaaaatatgaaatactaaaacaatt
ttaacttacttaaaagaatgaaaatatgatggccaatgaaaatgaagaat
gttggaaacaatgaaaacataatgGTCGCAAACAGAGAAGAGACAATAAA
CAAAGAAGAAGTGAAATctcctccccaatcctcctcctcctcctcctccg
aAGTGTCAAAAAACGATAAAAGCCAAAAACACCAAGAAGCCACTGTAATG
CAATCTCTTTCTCAAGGCGTCAATACTGATAGTGAATTGGCAATACACGA
CGAAATGCAAGCATGTCAACAAAAAACTGTAGTAGAACCTCCTCAATCTT
TCGAAGAAGAGGTGTCAAAACACGATGAAAGCCAAAAATACCAAGAAGCC
ACTGTAATGCAATCTCCTTCTCAAGGCGTCAATACTGATAGTGAATTGGC
AATACAGGATGAAAGCCATCAACACCAGCAAGTCACTGTAGTAGAACCTC
CTCAATCTTCCAAAGAAGCAAAAGTGTCAAAACTCGATGAAGGAGGTCAA
GAAAACCAAGGAAACATTCAATCCGAAGACCAAGGTTCAGATACTGATAA
TGGTATGGTATACTGTTCTATCTGAAGGAGGgactgttttatttttcatt
tgtaattttcGGTCCATTATGTTCGAGATCTCATCAAAAAACGGATCCCT
GGTATTGCACTTTTCTTTGTGATTGGAATTATTATAAGtttttttCTTga
gcaattttataagaacagaaggctAAAATTGGGAGAAAAAGATACCCTGT
CCGTTCCAAGCTTCACATCCCCGTACTTATCTCTTTTTGCCTACAAAGTA
CTCTTAGTTACCGTATTATTTCGAAtaacgcccggggcgtttattaattt
ttttttgattttaggaggggcgtttattcgagggggtgtttaaaagaagg
gggcatttattaaattatttgagtCTAACgttgaatattttaaaagcaAA
TCTACTCTTTGTTTTAGTTCAATACCAAGATTTCAGTGCAAATTTCTTTG
GGTCAGCGACTAAAATTGCATCAAAACTGATCTGGTTAGAAAAAAGACTA
AAATCTTTTCTAATCAAAACTTGTATCAAAGTATTTAAatcacaagtttc
taataaatgCCCCTCCCCTAGAGGGGGCGTCAATTCGAAGGGGTCGTTTA
TTTCAGGGGGCgattaaaagaagggggcgtttttTCGAAGTAGATCTCTC
TGATTCGATCTTCAATGGGgtcaagaattttcttcaaattaaaaagattc
aaattaccGTGAGTAATTAATGATTAATAAttaaggttcgaattagagat
tGTTAGCCGGTTTGTTTTTTAACGCGATCTGTACGATTTTTTAAGCAATG
CAATTGGCTCTTTTCGCATACCGACGAGCTTACAAGTATGACGTcagtta
ttttcaaataaaatggaCACTACGTTGACATCATTTCCATCtctttttca
agtttattttATCGTAAATTCACACAAGTCTTTCTCTTTTTCAGTCGTCT
TTCCCAGTATTCGCGCTATAAAGTGCAAACAAAAAGAGACAGTTAACAAA
GATATGTCTGGTTAGTGAGGGCTGCACTGATAAATATCACCCGAGACGCA
ACAATGCTTCCGAGTCATTATTAGTAGGGGACCAATCCTTAggatccgtg
acatcttttatgcgacgcaaccGCATGTGGTTAGTTCGAAAGTAGGAAgg
ttttaaagacttttttgagagggggcccgcgaattaggcccggcaaaagt
ttttatgactAAAAGACTGACGTTTACAGACaaaactgtaagggtaaaaa
atgggtaaaaaattgacgttttttaaaagtcgaatttgaaagaaatggAT
GAGACCatcggaaagagcatgaaattctgagcaaaaaagtataaTACAAC
AAGTCTCTTACTCGAACGCACGAAGAAATACGGCCATCTAAAGTTTGAAA
TTCTGTCAGATGGAGTACGATTGGCGTCAAATTTTGTATGTCACGGATCC
TAAggattggccccctactatattAGAGTATTAGAGTTAACtgtttttga
aatcaaattaaacccttcaaaaaatcatttccactttttttAGTTGTATT
GGAGGTGGGAGAGCAACATCAgattattgtttttgaaatcaaatttaacC
CTTCAAAAACCATTTCCactttttttagttgtgttGGAGGTGGGAGAGCA
ACATCaaattattgtttttgaaatcaaattaaACCCTTCAAAAAACCATT
TCCACtttttttAGTTGTATTGGAGGTGGGAGAACAACATCAAATTATTG
TCCAACAGAATGACCAAGAGCTCATCTTTTACGTCACTTATGAAGAAAAT
GTGGATGTAGATGTAGAAGGACAACCGAACTGTGGCGATGGAGAATATGG
TGGAACTCCAGTCGAACAGGTTGGTGCAttacacctatcaaccctttGAG
CGGCGAGATTGGCTTTTTAGGGGACTGGtgatgaatttacaaggaagaTT
TGCTCTCGGTGCACGGCATTTAGGCATTAGGCTGCAACCAAATCAAACTA
AGCAAATTCCCACCAAAACTCTTGAAAAAAGTATTAACCAAACCTAAtcc
atttcaaagaatgaagtACTTAAAGAGTTTTTCACGAGGGAGGGGGCGGG
GCGGTTTCTGCTGAGGCCCAGaaaaaaaCTGACATCACAGGGAAAAAATA
GACCAAGTTTTATACGTCGCGTGAAAGATGTCATTGGTCTAAGGGTTTGA
TAGGAGTTAATACTTTTTTATTACTCTATCATTTAGATTCTCCTGTTCGA
TCCAACCCAAGCTGTCCAGCATCATCATGAAGACGAAAGCAACGCCAGAG
ATGAACGCAAAACCTTGGTCAATTCTCCAAAACAACAGGGCAACAATGAA
AATGAAGCCAACGACGTCGAAAACATCGAGAACCCTTGTATAAAACTCCC
AAAGCAAATTATTGGAGCTCAAACCATCAATGAAACTGTAACAGGGGCTT
CTTGTATTAAACTCCCAAAGcaaattgatgaaaatctaGCCAAAAGTGAT
AACTTTGAGAAATCTTGTACAAGACTTCCAAAGCAAGATATTGAAACCGA
GGTCAACAATGAAACTGTTGCTCAAAGTGACGACACTGATGCTTGCTGTC
TAAATCTTTCAACTCAGATTAAAGAAATTGAAGTCAAAGTTAAAACTCGT
ATGAATGGCACTGAGAAATCATTCGTAAAACTCCaaaagcaaaatattga
aaatggcATCGAGGCTAAAACTCGTATGAATGATAGCACTTGTATAAGAC
TTCCAAAGCAAAATATTGGAACTGGAATCACCAATGAAAATATAGATGAT
ACTACTCAGACCTCTCGTATAACATTTCCAAAGCAAATTAATAAAACAAA
AGTCAAAGATGTCACCTGTGAAGAGAATGATGGCACTGAGACATGCTGTA
AACTTCCAACGCAAGATGACCAACGCGGAGATGAGCGAACAAGAAAACtc
gataaaaaaataaataaagaagaCATAATCGATGATCAGGGTTagtaata
tctttaaaattatcttttagaattctcgccaaattttctttttaaat Coding sequence (CDS) from alignment at sc0000140_pilon:378130..381776+ >MSTRG.15632.2.p2 ID=MSTRG.15632.2.p2|Name=MSTRG.15632.2.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=345bp|location=Sequence derived from alignment at sc0000140_pilon:378130..381776+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATGGCACTGAGAAATCATTCGTAAAACTCCaaaagcaaaatattga
aaatggcATCGAGGCTAAAACTCGTATGAATGATAGCACTTGTATAAGAC
TTCCAAAGCAAAATATTGGAACTGGAATCACCAATGAAAATATAGATGAT
ACTACTCAGACCTCTCGTATAACATTTCCAAAGCAAATTAATAAAACAAA
AGTCAAAGATGTCACCTGTGAAGAGAATGATGGCACTGAGACATGCTGTA
AACTTCCAACGCAAGATGACCAACGCGGAGATGAGCGAACAAGAAAACtc
gataaaaaaataaataaagaagaCATAATCGATGATCAGGGTTag
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000140_pilon | genome | sc0000140_pilon:378130..381776 + |
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