MSTRG.15528.1.p3 (mRNA) -

Overview
NameMSTRG.15528.1.p3
Unique NameMSTRG.15528.1.p3
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000138_pilon:65550..74117-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.15528.1.p3 ID=MSTRG.15528.1.p3|Name=MSTRG.15528.1.p3|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=8568bp|location=Sequence derived from alignment at sc0000138_pilon:65550..74117- (Clytia hemisphaerica_ch_hm2_pilon)
TTATGAACCATCTGGCCAATGTCTTCAAAAAAACAGCCTACACGCCTATT
TTTAGGCAACCACGTCAAGGCTGAGCAGGCATTGGAACTCTTTGTCAAAT
GTAAAGCTGAATTAGGGGTTGAATCCAATTTGGATTTTCTTACCTTATTG
CTTGAAAACATTGGAAATGCCAAAGCAACTTTGGACAATCCACCATCTTT
TGTATTTTCTGGATCAAGTGTCATATCAAGTGAACCAACAGACCACTTAC
AGAAAACAAAAAAACAACCTACACGACTCTACTTAGGCAAAAGCTCTAAA
GCTGACGAGACTTTGCAATTATTTGGCAAATGTAAAGCTGAATCAGATAT
TGAAAATAGTACTGACTTTCTTATCTGGCTGCTAAAAAATGTTGAAATTC
CGAAAGAACAGATTGTGAAAAGTTCCTCACTTCCTTATGTATTTCCTCCC
GAAATTCTTCCTTTCCTTACGGAATCCAACAAGGAGCCATTAAACACAGC
AAAATCAATAACAATCAAAAGCTCAAAAGGTAAATCAACAGTATTTGGTC
GTGCTAATGCAGAGGTTGTTTCAGAAGATAAGATCATCAATGAGCCTCCA
AAAATGGTGTTACAGGAGGAAGACAAGACACCACCACAAAGAGAAAATAT
TATCATCGTGAAAAATAATGAAGAAAAGAGAAGCCTTGGTAATTGTATTA
ATTTTAGGTTGGGTAGGTCTGTACTAGATATTAAGATAAAGTCTAATGAC
CTGTTATAAAATAAACAGAACGAGTCTCAACTTAATATAGATCAAGTATT
CGGTTATTTTGCTTAAAATGTTTCCATAATAGACCTTTTCATAAATTACG
TCACGAACAACATTTGCCTCGTTTCGAAATTATTACCATGGAGATAAACT
TCCATTGGATTTTATTAGTTCTACTTTCTAATCATAAAAAAATCATTTAA
TGTCTCAAGAGACAAAATCACCATGGTAATTGTTTGAATACGAGGCAAGT
GATGTCCGTGACGTAATTTATGAAAAAGCCTAATGGCAAAATCAAATGAA
ATTTATTGAAATTATTAATATAATCTTCTCAGTCTTCTATTTTTCAAATT
CATGTTCTTCACTTATTCCTTGCATGAAAAAAAAATTCCAGCACTTTCTG
GGACAGAAAGATATTATATATTTATTGATGACAATGATTTTTTATATACT
AGGTGCACGATCACACCCGGAAAACACAGGTCATGAGATGGAATTGATAA
ATCAAACACCAGAAACATCTATCATGGACAACATGACGGAAGGAATTTTA
TTCCAGTGTGTACAATGTTTGATATATTTTCCAGAGCACCAACTCTTAAT
TCAACATTCTGAAACTCATAAGACCGCACCCAAGAAACCGTACATGTGTA
ACCTTTGCTCTAAAGATTTTGATGAATGTACTGAGCTAAAAATGCATATG
TCAGAACATTCAACAACTGGTAAAAAGCCATTTCGTTGTGGCATTTGTGG
TAGGTGCTACTCCATTCCTGAAGTCTTGGAGCGTCATCTTGAAATCCATT
TAGATGATCAAAGTTTTGTTTGCACAGTCTGTGAGAAAAAATTCCTACGT
TTACAAACCTATGAAAAGCATATCCTTACACACAAATCTTTGCAGAAACT
CTTTTTGTGTGAAGTTTGTGATAAAAAGTTCACAAAAGCGGAAAACTTTG
AAAAACATATTCGCACACACATCAGTGATACTACTCAGGAAACACTTCAA
TGTGGAAATTGTAGAGAATTCGTCAAAGATCCTGGTGTTCTGATCAGACA
TAGTCGAAGCCATATTGGAGCAAATTGTTACAAATGCAAGCTGTGTGATG
AGGATTTTGCTAATGGGGATGAATTTGAGGACCATGTTTGTCCTTACAAT
GATGTAGCAACAGACGAGGGCCAGAAAATTGATTTCCCTCCTCAATTGAA
TACTGAAGAAAAGTCGCATCATTGTGATGTTTGTGATGAAGAGTTTACAA
ATTTAGGTGCATTACAGAAACATGGTCTAAACCATACAGATAAAATATAC
GACTGTAAGTTTTGTAATAAGAAATTTGCTGATATGGTCAATATGGAGCG
ACATTCTTTAACTCATGCAGGTGAGAAGCCCTACCTCTGTGATTATTGTG
GTGTTACTTTTGCTGAATCAGCTGAACTCCAAAAACATGTACGTCAACAT
ACTGGTATTAAAAGTTTCGAATGCAAAAAGTGCCTCGGAACTTTTTCTAC
ATCAGCAAATTACAAAAGGCATAGTTGTAAAGATCGACAACACAAATGTG
ATACCTGTGGTAAAGGATTCAGTAATGGCAGCAATCTTCTTATTCATACC
AGAATACACACTGGAGAGAAGCCATACTCGTGTGAATATTGTGAAAAGAG
ATTCAACAATATATACCATATGAGAACGCACACTAGAACTCATACCGGTG
AAAAACCATACAAATGTGACCATTGCACTAAAACATTTGGACATCCAAGT
AATTTGCAAAGACATCAGCGTTTTCATACTGGCGAGAAACCTTATAAGTG
CACACATTGTGAGCGTGGGTTTGTGGCTACCAACGATTTGAAGCGTCACA
TTCGTATTCATACTGGTGAAAAACCGTTCCATTGTGATGTCTGTGGCAAG
AGCTTCACAAACTCCAGTAATTTTCAACGCCATCACCAGAGGCATAGACC
GAAAGACAAGCATGAACCCAAACCATCTAGCCAAAGTGTTTGATTTATTT
TCATTTTTGATGATGATATGATGTGGTAGTGACAGTAGTTTTAAAAATTT
CCTCATATTAATCACTTTTATTGAATATAGAATATTGTAATTTGTGTTTT
AAAGTTCTTTTTTTTAACCTTTAAGTATAATTAACTTTTTAAATATATTT
TTGATTTTATTTGAACATTTCATTTTTTAAATTAAATATATACAACCTAT
ATATGTGATTTTTCTTCTTTTAATTTGTGATGACAATAAGGAAAAATAAG
TGAGATACACGCTTTTTCTTTTATAAGAATAACTTCTATAAGAATATTAG
GGTGAGATTTCGGGTTTAAGACAATAGGCCTATTGTTTAGAACAATAGAA
AAAAAATAATGCTCACCCTCAACCAAAGTACACTATTCTTATAAAAGAGA
AAGCGTGTTGAGGTCTAATATCCTAATGAAACGATTTGCTTCTTCTCCTA
AAACTTCAAGTCGCTCGCAAATCATTTACTTCTATTAATGCTTATTATTC
TCTATTTTTTAGGGACAAACACATAATTGCTTGACCATGAATGATAAATA
AACAGTGAAAAATTCTGGATACATCAGTTATGTTGTTGGCAGCTATCAAG
CAACCAATCAAACGATACAAATGTTCTTCATGTGATAAAGCTTTCGAATA
TCCCAGTGGTTTGACAAGACATCTCCGTTGCCATACTGGCGAAAAACCCT
TCTCATGTCTGATCTGCAATAAAGAATATTCTCAAGCAAGTCATCTTCAG
AAACACGAAAAATCACATTTTGGAAATCCTACTGAAAAACATTTTAAATG
TCAACTGTGCCACAAGACATTTTATTACCCAAGTGAACTTCACAAACATA
TTAACACTCATGACAAGATGGACAAACCTTATCCATGCAATATTTGTCCA
AAAAGATTTAAGTTTTCAAGTGCCCTTCAGCGGCATATGCGGAGCCACAC
ACCTTCATTTGAGGGTCCCAGATGTGACAAAAGATTTGAACAAGCCAATC
ATCTGGGAGAGCATAACTGTGGTGGTAAAAAAGAGTTAGTTCAACCTGAT
GATTGTATCTTGATGGTCAAGAACAATTTTGAATCTAATCCAGTCGACAC
AGGTACATGTTTTTCAATCGAAACGCTGCAGAAAAGCAGTTGTAATCCCA
ACGATGAGACACCTAGAGAAAGAAGAATTATTTCTACAGACAAACCAACT
ATAACTCAATACTTTTCTTCAGGGATGAATCCAAAACACGAAGATCCTAA
TATAAAAAGTGAAAAACCAAAAACACACAAATGTACAGTTTGTCAGAAAG
AGTTTCAATATATGAGTGGTTTGCAACGACACTTGCGTGTGCATACAGGT
GAAAAACCCTTCGCTTGTCAAATTTGTGGAAAGACTTTTTCTCAAGCACC
ACATGTTCGGAAACACTTGTTAACACATATCACATTCGATCAAGACTATG
AATCAACAATGATGCTGGATTTGGCCAACAGTTGAAATATTGGAGAGATT
TAGTTTATTTTTGAAATTCGTCTCAAAGTCTCGAAAATTCGTTTCATTGC
AGATGAGTTGTTCCTTAGGATTTCTTTGTTATTGCGATATTAAAAGTGAA
ACATTTACCAACTCGAGGGCCTGTTGAAGTTTCTTCTCAGCATAGTTTGA
CCGTATGTAGTCCACAATTATGATTTGGGTTAAATTCATTACTAACTTGG
GTGTCTATAATTTCTATAACTTCGTTATTTAGTGATGATTAATAGGACTT
TATGTTTTTTGGAAGTACATTAACCCCATTTACACACTGCCACACTGCCG
ATCAGATTTTAATAAGAATTTTTACTTCTTTATCTGTTTTTTTTATTTCT
ATATTTTTATTTATTCATGATATTCATGACGTAATGTTTTCTACGGAAAT
ATCCCGTTTTTAGCCAGTAGTGGCAAATTTTAACTGGACAAAGGTTGTAT
AAAATTTGCCACTACTGGCAAAAGCCGGGGTCTTTCCGTAGAAAACATTA
CGTCATGAATATCATGAATTATAAGTGTATATTTCATAAATTGTACCTAG
GCTGATTATACCTTCTTTGCAGGTTAACTATAGTCATGAAATCCGTTCTA
TACATAGCATGATTCGACAAGTTGTCTTCTGACACTTCACTTGTCAAACC
TTTAAGTGTGGAGACTTTCTTCCAAACGTTCAAGATCGTTTGAAAGCTCA
GAGATAAAGTTCCCCGGAGTGTATGTGAAATCATAACAGAAATTTTCAGT
AATTATTACCTGTCGTCTTATTTATCTATTTCCAGTAAAAGTATCAAAAT
ATTAAAGATTGTTTAAAAATCTCACGATGGAAGCGGCAGAAGGCTTTATT
GGTTACTACGTTTCTCTACAATGTGACAACGATTCCACTTATGAAGGTGA
AGTCAAATCCATTGATCCTGAACGCCAATTGATCACCCTTACACACGCTC
ATCAAATGACGGCGGATGGGCGGGACATGAAGTTTCCACAGATCACTTTG
ACAGGGAACCACGTCAATAATTTGAAGATCATCCGACAAAAGTTGAAAAT
ACCTGATCTAAACCAGCATATTCAAGATCAACAGGTAAGCTTTCTTTCTT
TCTTATGCCCAGCTTTCTGAAGGGCATAGGCTGAAATTCAGCAAATTAAT
GGGGTTAACTGAGGGGTGCCTTACTTGGGAGTATATGTATACGTTGTCTT
AAAAATACCTAAAGTTTTACGGTGCAACTAAATATCTGAAGGAGTTGAAA
CCCTGAAAGGGTTATCCACGGGACGTTTAAAGCCTTGAAAACCTTGACGA
GCTTTCATATCATTTTTGTCCTGTTTCGATTCGGCTTGTTAATTGCAGTC
TGTCTGGATTGTATTTGTAAATATTTTAATGTTCAACTCGCTCTCGCTCT
CTAGCAACCAAGTTGTCATTTATTTCAGTTTGGTCTCGGTAAAACCTTTG
ATTTTCATTTAAAAACAGTTAAAGATATAAAAGTCTTAAAAAAAAAAACA
GAATAAAATTTAGGCATTCTGTGCTTTTTCTGACCTTTTCTGAATTTCCA
TCATAATGCCTTACGCTGAAAGATGATAGAAAAAGTAATAAAAAATGTGT
GTACTGTATGTGTTATGAGTATTACCCCTTTTAAAATTCAGGAATTTCCT
GAGTTTTCGACTTGATATTTTGACCAGTAATAGTTATAAGCAATCTCATA
CTGTGTGCAAAACTTCAACTGCCAAAGCATGTTACAAAGGAATTTAATTT
ATCCAATTTCTTAACGTTTAGAAATCAGAAAAGAACAAGAAACGTACCAG
TCCACCGAACCGCGACCCTGACAACACGTACAACTCTTACAACAACACAA
AACCAGCACAACAGCAACGCAAAAAGAGTGGCACGTTCACCAGTCAAGAT
GCTTCGGAGATTTCCATGTTCCCCGACTTCGATTTCCAACAGAACAATGC
GCGTTTCGATAAGCAAGCAGTGTACGAAAAAATGTTGCAAGAAACGGACA
GTATTCCGAACCCCGCGCCTCTCTATGATCCGAAAATGAGAAGTCAAGAC
AACATTTTAGAAAGTGAACCGGTTTCGTTACGCCAGATTCAAGTTCCGTT
AGAACACGCTGGTAAAGAATTTGCAACGGAAGATGGTTTCATCATCCCTG
CTATTACGTTATCGCTGAAAATGAAACTGTACGCAGCTGCTGAAAAAGCA
GGACTTTCCATTCACCAGTTAGTTGAAACCTCCGGTATCTGTGTGTCACA
AATGGCTATTCAACTGGTCGGTGGTGCTTTGCGTTTGAATCCCAAGAACA
GTCACCAGAGACCCGAAATTGTCGTGTTAGCTGGATGCCACACGCAGGGT
CTACAAGCCATTTGTACTGCACGTCACTTAGCAAATCATCGTTGCAAAGT
GGTCCTCTATTTCCCTAACTCCTCACCAGAGTTGCAACCTCAAATCAATC
TTTTCCAATCAGCTGGCGGAAAGATCATCAAATCGACCAGGGAACTTCCC
TCGCAACCAGTCGATATGATCATCGATGCAATGGTGGGACACGAGAACCA
TCAACCTACACCGTGGCTTCCCTACGCCGTGTCATGGGCGAACCAAAACA
AAGCACCGGTAATGTCTATCGATCCTTGCATACCAAACTCTAAAGTAGAT
CTTCCAAATATCAAATGGGCCATCTCGTTAGGTTTACCGTTAATAAAATC
ACCAACTCCGGGCCGTTTGTATCTGGCAGATTTGGGCATACCTCGCGGTG
TTTTCAGAGATGCTGGTATTCAATATGTTTCACCTTTCAAAGATAAATTT
TGCATTCCTCTTTATGAATCTTAACTTGGTGTATAGTGTTCTTTGATTAT
TTCTTTGTGTCCATCATTCATGATTTTTTGATATTTTATTTGCTTCGTTA
TGTTAATTACGACATTTTAAAACGCTATCGAGTTAAACAATACCTTGAAT
ATCTCGTGTTTTCTTAAGTTAATTTAAAGTGATTTTTTTGAAGGTTTTGA
GTTCTCTGAGAATGTTTCTTCTTTGAGTTTCGTGTTCTACTTTTTTGTTT
TCTTTGGTCATCTACGACATGATACCTAGAAATTTTAATCGATATTTTAT
AAAGTTCTATTTATTTCCAACATTTTCCAGTTTTATAAACTCAGTTTTAC
CATATTGACCAACGCTCTCTCCCCATTGGAGGTGTATAAATTGTTTTGTC
TTCGACATAGGCTTTACTCGAGTTGAAAAGCATCGTAAAGCCGCCCTGGT
CATTTGGCTGGTGACTTAATCATATAAGAAATAAGGGGAGAATACAATGT
TGTTTTGTAGGGAGTCTAGTCTAGCTCCAGTATTCTTATGCTATCAGTGA
ATTCATTCACGCTCAAATTTCACTGCATGCTTATGCTATGTGATATGTTA
ATGCTTTTCGGGTGCTTGAAATTAAAACGGTTGTTCCGTAAAAGCAATAT
CAATACAATTTAAATCTTGTTGAACGTCTGTGTTGACAAATAGATCTACT
TTCACCCGAGTTCAGTAAAATAATTCACGTACTTAACCTTTATAAAGTTT
TAAAATTTCGATGGCAATACAGTAATATCACACGTTTTTTTTTATCAGAA
TACCTAAAATGCCTGGATGTGCTTATTTTTTTAGCAACTTTCAGCTTAAA
ATGTACTACAGACTACTCTTAATCGACAATATCATGCGAAATAAAGAGCA
CTTAAAATTGAAAAAATTTGGATAATATTTAAATAACAATGGGCTTTTCC
AGAAAAAATTTGAATCCCATTTGGAGGAATATGAGGTTGAGGATATAACA
ATTTTGATTTACGCCCGGACAGCGGGTTTTACCCCCGGACAAGCATCAGT
TGACCCCCCGCACAACCCAAATTACCCCTGGACCGAGCAAATATAACCCC
CGGACAAGGCAAATCTGGATGATTTTTCGCTACTCCCCGGACAATATATC
ATCCACCCCCTATGCACGGACATTTTCTGGAAGAGCCCAATATTTTAAAT
CCATCCCTAAGTTCGGTTAAAACTGCTTGAATTTTCAGCCTATATGTTCT
TATAAACTGAGTTCTAATAAAAAAAACATGTAATATTTTAAGGTTTCCTT
TTTTGTTGTTTTAGAGTTTTCAAAGAAAATTATAAAAAAGTTTGACATTT
TTATTTGATATTGTATATCTATCGTATTTTTTAAGAATTTTTACAATTGA
AAAGTTCAATATTGTCAGATTCTCCCCCTGATGCCGCAGATATAACGATT
ATATCCAATCCATTATTTGAAGATTTGAGTGCTATGAAGGACACTCTTAA
AAATAAGTTGAATATCCA

Coding sequence (CDS) from alignment at sc0000138_pilon:65550..74117-

>MSTRG.15528.1.p3 ID=MSTRG.15528.1.p3|Name=MSTRG.15528.1.p3|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=906bp|location=Sequence derived from alignment at sc0000138_pilon:65550..74117- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTGTTGGCAGCTATCAAGCAACCAATCAAACGATACAAATGTTCTTC
ATGTGATAAAGCTTTCGAATATCCCAGTGGTTTGACAAGACATCTCCGTT
GCCATACTGGCGAAAAACCCTTCTCATGTCTGATCTGCAATAAAGAATAT
TCTCAAGCAAGTCATCTTCAGAAACACGAAAAATCACATTTTGGAAATCC
TACTGAAAAACATTTTAAATGTCAACTGTGCCACAAGACATTTTATTACC
CAAGTGAACTTCACAAACATATTAACACTCATGACAAGATGGACAAACCT
TATCCATGCAATATTTGTCCAAAAAGATTTAAGTTTTCAAGTGCCCTTCA
GCGGCATATGCGGAGCCACACACCTTCATTTGAGGGTCCCAGATGTGACA
AAAGATTTGAACAAGCCAATCATCTGGGAGAGCATAACTGTGGTGGTAAA
AAAGAGTTAGTTCAACCTGATGATTGTATCTTGATGGTCAAGAACAATTT
TGAATCTAATCCAGTCGACACAGGTACATGTTTTTCAATCGAAACGCTGC
AGAAAAGCAGTTGTAATCCCAACGATGAGACACCTAGAGAAAGAAGAATT
ATTTCTACAGACAAACCAACTATAACTCAATACTTTTCTTCAGGGATGAA
TCCAAAACACGAAGATCCTAATATAAAAAGTGAAAAACCAAAAACACACA
AATGTACAGTTTGTCAGAAAGAGTTTCAATATATGAGTGGTTTGCAACGA
CACTTGCGTGTGCATACAGGTGAAAAACCCTTCGCTTGTCAAATTTGTGG
AAAGACTTTTTCTCAAGCACCACATGTTCGGAAACACTTGTTAACACATA
TCACATTCGATCAAGACTATGAATCAACAATGATGCTGGATTTGGCCAAC
AGTTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.15528MSTRG.15528Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.15528.1.p3MSTRG.15528.1.p3-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.15528.1.p3.exon4MSTRG.15528.1.p3.exon4Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.15528.1.p3.exon3MSTRG.15528.1.p3.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.15528.1.p3.exon2MSTRG.15528.1.p3.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.15528.1.p3.exon1MSTRG.15528.1.p3.exon1Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000138_pilongenomesc0000138_pilon:65550..74117 -