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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000137_pilon:867713..874551+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.15513.2.p2 ID=MSTRG.15513.2.p2|Name=MSTRG.15513.2.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6839bp|location=Sequence derived from alignment at sc0000137_pilon:867713..874551+ (Clytia hemisphaerica_ch_hm2_pilon)
TTTACATTCATTGAGAATGCTTCTAAGAGAAAGCAGAGTGAGAAgggaaa
attaaaatcaattcgAAATAAGGTAAGAAAAAGACCTTTCCTGAAGCCCC
CTTTAGAGTGACTTTTGATTAAgataaattttgattgattgcACATATGA
CTggttgagtttttttttggtATAGTGAGAGATTCCTGAAAACTTTATTT
CATTTGGTtgactagatcaaaagttatttcaCTTTCTGCATTATTATTTC
TTACTTTGCAAGGCGTCTGATCACTTTATATACTTTGCAGCTTTTTCATG
TAAAcatgatttttcaaatctttaaatTAATAGTAAAGCAATgagaattt
cttttaaatttgaaatttttacaaatttttactttaatattaatacctga
aattaaagaaaaaagtttgaaaaattcttagttTGAACTTTGAGATATCA
TTAAATTTGATCACGTGATAGATTTCAGGAAAGGTAGGCAAACCCAAAGG
TAGGTAAACCTTATCTCAAAATAATCTGCAGTTTATGTCatgatgataaa
attttagagtcaACCAACGAAAAATTATAGCATATCTTATAGCATGATAT
TTTATCACAGCTTGATTCAAAAGTTGAAACcttttttatccccactgtag
aaattttttaagtaaggcaagtacttttttattttctggtttacggacat
ttagagatgatcttttggaccggaggatggaaaaaaaataaaaataaaat
tgtcgttttcaaactttaatgttgTGTTGGAAAGaataaaatgtgttttg
agGAAACTTGCATACaccagaaaatcaaagaaagtttttcagctAGAAAA
TTTTGTTGAGCGCCATTGGATGAGGCATATTGGGAAAAAGAGATTGCTGT
ATCCTATTTTCTTCCTTTCCTGCTCTtataaaatgaagttttctaaaaaa
aatccatttcatGGCAGATCAAACAGAGTCGGAagtgcaaaaataaataa
aatttctgtgaatttcaattctatttttattttatttttgcaaaataatc
gtcggcgattccgtaaaccagaaaataaaaaagtaattgcctaagGGTAA
CTATTTTAATCCCAGTTCATGTAAAGTTAAAAGAATTTAGTATGTAGTAA
AGAAAAGGAATTCTGAATTTAAAAGCGTCATCATGAATTTGATTATAATT
AGTACACTGTTTGATCTAGCAGGTCGGACAGTTGGGTAGAGTGACTCGGA
CTCCAATCGTTGTTTTAGCTTACACTGCAGATGgcaatatcaaaagttat
ggtgaGATTTATCTTAGTTTTCTTGTGTATTTAGCGAAGAGATATAAACA
CTAGAAAGAAATTTAGTCAAATTGTAAATGAGCTGAAATTagtattataa
aaaacacttgCCAATCGTGCCAATAAGGTTCCACCTAAAACCTACTTCCA
AGCAATAAGGAAGGGAATGACTCAAAAGGTTTCAGTTCGAATTCCGACTC
GATCAGAAGGTATGGGACCTAGAGAAAAACCCTGTAAAACAATattaaaa
atttcacatttcACATGAGGAAAGGCAAGACAGAAAATTGACTGTCTAAA
CTTGGGCTTATTAAAGCCTTTCCCAtccaaaattatctttccaaggAGGA
AAGAtcttttattgtattttgaatTATACCGTTTTTCCTTAGAAATCAAT
GTATTACTGTATGCGGCACTTTATTTTTTAAGGTTGTTGATATTTAGTCA
AGATAAGtcattgtagaaaaaaaaagaaaaacgtgaagggtatttttgtt
aattatgtgtatttacggttatttatatttatggttgttgatattttata
taATGGCTTTTTCAAGGTTCATCAAAAGGAATGAAGGAATTTGCTCAAGA
CCCAGcaataattcaaaaattcaaagattCTCTTCCAAATAACGCAGGTA
TAACTTATACAGATAATTTACTAAACGgtcatagcttcagccaggtttct
agctccccccaacaaagtaaggtccccccaacaatttagctccccccaaa
aaattgtcttgtgctaggtcccctaaaACTTCAGGTCCCAAGATAAACTA
AAACACCCCcgtagagagaagtcaataaaaaatatatctaGTACAgcact
gataaatgaaaactaaattttacttgttttaatatttatgtttacaaatc
ttttgctttttatatttgatttaatagtaagataagagatattttgaatt
tagctgaacagcccccagagtctcagtcagatcatctaggctccccccaa
caatctaggtccccccaaatattttggtaattttagcccccaggctcttt
aaaggccaaaatatttcttagcccccccccaaaaataagggggggggctg
aacctatgacggttcccgtcgtcgcaaacgttGGTTAAGGTTTTGCTTGC
CCATCGAAAGCCCTTAAACTATAGGCGAGGGATGGGTTAAGGTAAGATGA
AagcaaagagaaaaacaaaacaattctcTTTGTATTTTGTGATATGTATG
CCAATTAATTGAAAAACTAAAggatttgtataaaaaataacataacGATC
TAATTTAAATTACGAAGGGTGCCCTTATACCTAGCAAGAAGCCTCAATTT
TCAAGGAGAGGGGCTCATTGTTCGCGAGTCATGCCGTCCAATATGTTAAC
TTAACGTGTTGATAACTTAAGACTGGTGAAATTACTCCCAATCCAATCCA
ACCCAACATGCATTTGATCCAACTTAGAATGATTTTGCATGAAATGCTGG
ATTCATTTGCACTGGCCTTTAGCGTGTTCGTAAAAATATGCGAAATCGTG
CAACGAAAAGAGTGCCACACCCctatatttgaaactttgtgacgtcgtgg
cacttttttcataaagttgacgtcagaactttctTTCGTTTTAAAATGGG
AGTGTAGGGGAATCTTCTAATGTgcgttttcttttttcccttttcaAACT
TAACTCGAGACTTTTCATCTCCAATTAAATAtattgaagatgaaaagttt
ACTCCCTTCAAGAAACGCTGAGCTTGCAAAGAGATTGCAGTTATTCAACC
AAcgatcaaaacaaaagatagcgCGCGGCGTAACTTTAGTTGTTCGATTC
AACACCGCAATTTCTTCactttaataaaacaatttaatGGCCAGAGAGTT
TACAATGCTTTGACTGCAAAGTCTCGATTAAGAATTGGAACGAATTGTCT
GCGTTTTGAATGGAGCTTTCGAATAACTTCAATCTCTATGCAAGCTCACC
GTTTTGGAAATTATAATGTCAGATTGGCTTTGACTGGGCTAGTGTGACAG
ACATTTTTCCAGAACTATAAAGGTTCATCCTTATCAGAGCTCATTTCGTT
TTGGTCAATCGAGAAAAAATGTTACCatcagtttgtttttatttacattt
tagcCTTTGAAGAAGAATCTTCAgagagtgaaagtgaaagtgaagatGAA
GAGGAAACTCCTGCAAAGAAACAAAAGCTTACTTTTGATGTTGATTGGGA
AGATAATCTAAAGGTTATCCCGAAACGTGACCTCCTGTGTGATATTACTT
ATCGATCAACAGGTTAGTTCCTATGCTTTAAAAAGTATCTATTCATTTAC
CTTATACCGTAGAAAACCCTTAAAAGTATGGTCAGTACTTAGAATTATAG
GTAGACAAACTTAGATTTTAAATACTTTAGGCTTCACAAAACGAACGATG
AAGTGGGTCGAACAGAATAAACCCAGTTGGTGGCCACGTCGAATATTGTT
TCGATCTCCTCATGGTAAAAGTAAAATTCCCGTGGCTGAAATGGACGATA
TCCTTCGATCATTCCATGAGCATAAAGTCATTAAAGCTGTCGTAAGTTTT
ATTCCCGTTTTGTGGAAAACATCAATTTAACAATTTGGAGGATTGTATGT
ACGTCAACTCTACGTCGATCTAGTAATTTCGTGATACATCCATAATTCGC
ATAGCTGCTTCAAAGTAACATAATCTTATATTGTTTTAGGAAAAACTGTG
CTCTGATGATGTAGACGTTTTCTTTCcaactttttccaaaatggaAGAAC
ATTTGAATTTATTCCTGAAGAAGGCTTCCATCATCACGGAGTGGTTGAAG
AGAAATAGAAAGATCCAAAGAGTTGCAATGGCAGATATCGAATACAGGTG
ATCCTTTTATCTAAGttcaatttcatttatttttttgtatttgtgtTTGA
AAGCCGCTCTAAAGAAATGCTGCCGCGATAATTAGGGGACCCATGGTTTG
GTGGTACTTCCATGGTGTACATTGAAACTTACTTTAAGTGACCTACGggt
aaaagttcaaaaacttgTCATGATGATATTTGTTGCCCTGTTAGTAGCTC
TATGCTCTTAGTAGCTTTTTACTAGTAAATATTCTATTTTGaataatata
aaattttattttgtcacTAGATGCCGGTATCTAACAACAAAGTTTGGCAC
GAGAAAGGAGCCCATCCTCTTTGGGTCAATACATCGTTGAACGCCGCATt
acgaaaaatttttcaaaattctatcgTTGGCATATGCTGTAAcgagaaaa
aatgatttaaataacTATGTAAGAATTGAAATTTGAATCGatttttgata
tgaatatagatgaatatatgtatatatatctacgtttgttattatatgtt
aattatatTTCATTCTAAGGGAACATCCGTCCttctttgaaaattattat
aaattttatCAATCTAGATTATGTATGTTTTTGGCTTTTATGCATTACCA
CTTTATTTCTAGATATGTGACGGAATAGATGATGTATCGCCGAAGAAGTT
TCAGTCATGGCTTAACGTCAAAGACATTAACAATTTGGAAGCATCACTTC
TTACAAATGCATTTGAATGTAACGGTAATAGTTATAAAATTTCTTAAGTT
ATGTGACTTTTCGTAACTTTCGCAATGTTGCGAAAGTCCAGTGGAGTTAG
AACCCTCGTATTTTAATTGGTTTAAAGATATATAGAAAACAATTATTCTA
ACTTTAATCACTTTTGTAAAAACTCTTCATCGCATGAAAAGACAATTGAT
TTTTGATAGATGAAAGACtaactttttaaacaaaaagtttatatttatTT
CACTTCATAACACTGTGAGAAAGGGTTATGTAGGTGTAACCTGACTCTCT
CTCCATCCGTATAACAGAAAAGAGTTAGACTCTGAACCACTCTTTGTTTG
TCTCGGAGAGACATAATGAAATAATATGAAGTAATACCCTccccccccAT
TTTATAAAGCTGACTTGTTCTGATGACTGATGACTGGGTTCCAATAAATC
TTCATCTTGATTCAATTCAATCGTAGGTATCAACTGATAAACTTATCTTT
TGACTCGACTTGACAAAACAGAAACTTATTGAGACACGACTGTACCGTAC
GAAATTGACTGAACACAATATTGGTTTATGTCTTATTTATGCTCGCAAAA
TCCTAACaggtttcatttatattttttgtcaaaatttttacTCTTGAATC
AGcctttttttacaaatattaaCAAAGTCCAATTTCAAGTGTGTATTCTA
ACATTTCTGGCTATCTGTTCTTGATGAAAACCAACGCATCAACTTTTTTA
agtcttgaaataattttcaatgaGAATAGAAATGTATTTAACGGTGATTC
TTGTTACTTCTATTCCAACTGTTATAGCAATGGTATCCTTGATTGGGCTG
GTCGTAGGGCTCAATAAAAATTTGGCAGTTCAAGACGGTGAAAGCGTGTA
CCGACTGACAAGGCAAGAAGACATTCCATGCGACATTGCCATTTTATGCG
GAAATGATCAATACGTGTACATGGCTGATGTGGATGAATTTGACGAGAAA
AAATGTCGAAGTCATAATATGTTTTGTTTCGATGATAGTGAAGAGGACGT
CATTGTGTGCCCAAATTGCCTACTCACCTACCACAACACGTGTGTGCGTT
GGAATGATGATTGTGGGTGTACTAAAATCCCTGAAATCAAATCGAGGTAC
AGTATAATCATCCAATAGAGGAAACTTAAAAAGGCAGACATCTCTGATTA
GGACGTAATGGTATTTTCCGCTTGCTAGTCAAAACCTCATcagaaacttt
tcaaaatagGTACACTTAATTAGATAAGGTTTCTACATGGAATTTTGTTG
GTCAGAAGCATACTTTTTCCTCTCAATTTATCATACACAACAGACATAAA
CTGgttaaaaaaggtcaaaaataaGAGTGTTTTATCTTATTACAGTAGTT
GACGCtcctaattcgatcttcaagggaaattggaaaaaaaaatgaattaa
tttaCTTGAATCCTAAActagaaagttttaaaagtttatgCCCTTAAACT
ATCTACTTTCGTCTTAGAATAACTGCAATGCTGGATAATCAAGTTATCAA
TACCTTTATGTGTGAGATTTACAAAAGAACAAATCAACTCACGGTGAGAT
ATTATATTACTAGTCCTACGCTATATACGCTTAACAATCGGGCTTTGTGG
TTTCATATACTATCAGTCGAATGTAAAACATGATCTTAGTCGCTCATGTT
TACTTGATGcggatttgaaatatttttttaaaaatagataaacttatttt
tcagaaaaaggcaTCTAATATGTTAAATGGGCATCAAAAATCTGCAAGGA
GTGAACTGATCCATGCCAGGGTAAATGAAGGAAGATGTGGAGTATTGACA
AAGatgaatttgttttcaaaaacaataccTGACCAAGTCGTAAGCGAAAA
CTATTTTACATTATATACAGTGTACCCTTAAAAAGTGTA Coding sequence (CDS) from alignment at sc0000137_pilon:867713..874551+ >MSTRG.15513.2.p2 ID=MSTRG.15513.2.p2|Name=MSTRG.15513.2.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1710bp|location=Sequence derived from alignment at sc0000137_pilon:867713..874551+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTATCCTTGATTGGGCTGGTCGTAGGGCTCAATAAAAATTTGGCAGT
TCAAGACGGTGAAAGCGTGTACCGACTGACAAGGCAAGAAGACATTCCAT
GCGACATTGCCATTTTATGCGGAAATGATCAATACGTGTACATGGCTGAT
GTGGATGAATTTGACGAGAAAAAATGTCGAAGTCATAATATGTTTTGTTT
CGATGATAGTGAAGAGGACGTCATTGTGTGCCCAAATTGCCTACTCACCT
ACCACAACACGTGTGTGCGTTGGAATGATGATTGTGGGTGTACTAAAATC
CCTGAAATCAAATCGAGAATAACTGCAATGCTGGATAATCAAGTTATCAA
TACCTTTATGTGTGAGATTTACAAAAGAACAAATCAACTCACGaaaaagg
caTCTAATATGTTAAATGGGCATCAAAAATCTGCAAGGAGTGAACTGATC
CATGCCAGGGTAAATGAAGGAAGATGTGGAGTATTGACAAAGatgaattt
gttttcaaaaacaataccTGACCAAGTCGTAAGCGAAAACTATTTTACAT
TATATACAGTGTACCCTTAAATGGTATCCTTGATTGGGCTGGTCGTAGGG
CTCAATAAAAATTTGGCAGTTCAAGACGGTGAAAGCGTGTACCGACTGAC
AAGGCAAGAAGACATTCCATGCGACATTGCCATTTTATGCGGAAATGATC
AATACGTGTACATGGCTGATGTGGATGAATTTGACGAGAAAAAATGTCGA
AGTCATAATATGTTTTGTTTCGATGATAGTGAAGAGGACGTCATTGTGTG
CCCAAATTGCCTACTCACCTACCACAACACGTGTGTGCGTTGGAATGATG
ATTGTGGGTGTACTAAAATCCCTGAAATCAAATCGAGAATAACTGCAATG
CTGGATAATCAAGTTATCAATACCTTTATGTGTGAGATTTACAAAAGAAC
AAATCAACTCACGaaaaaggcaTCTAATATGTTAAATGGGCATCAAAAAT
CTGCAAGGAGTGAACTGATCCATGCCAGGGTAAATGAAGGAAGATGTGGA
GTATTGACAAAGatgaatttgttttcaaaaacaataccTGACCAAGTCGT
AAGCGAAAACTATTTTACATTATATACAGTGTACCCTTAAATGGTATCCT
TGATTGGGCTGGTCGTAGGGCTCAATAAAAATTTGGCAGTTCAAGACGGT
GAAAGCGTGTACCGACTGACAAGGCAAGAAGACATTCCATGCGACATTGC
CATTTTATGCGGAAATGATCAATACGTGTACATGGCTGATGTGGATGAAT
TTGACGAGAAAAAATGTCGAAGTCATAATATGTTTTGTTTCGATGATAGT
GAAGAGGACGTCATTGTGTGCCCAAATTGCCTACTCACCTACCACAACAC
GTGTGTGCGTTGGAATGATGATTGTGGGTGTACTAAAATCCCTGAAATCA
AATCGAGAATAACTGCAATGCTGGATAATCAAGTTATCAATACCTTTATG
TGTGAGATTTACAAAAGAACAAATCAACTCACGaaaaaggcaTCTAATAT
GTTAAATGGGCATCAAAAATCTGCAAGGAGTGAACTGATCCATGCCAGGG
TAAATGAAGGAAGATGTGGAGTATTGACAAAGatgaatttgttttcaaaa
acaataccTGACCAAGTCGTAAGCGAAAACTATTTTACATTATATACAGT
GTACCCTTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000137_pilon | genome | sc0000137_pilon:867713..874551 + |
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