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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000137_pilon:867713..874551+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.15513.2.p1 ID=MSTRG.15513.2.p1|Name=MSTRG.15513.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6839bp|location=Sequence derived from alignment at sc0000137_pilon:867713..874551+ (Clytia hemisphaerica_ch_hm2_pilon)
TTTACATTCATTGAGAATGCTTCTAAGAGAAAGCAGAGTGAGAAgggaaa
attaaaatcaattcgAAATAAGGTAAGAAAAAGACCTTTCCTGAAGCCCC
CTTTAGAGTGACTTTTGATTAAgataaattttgattgattgcACATATGA
CTggttgagtttttttttggtATAGTGAGAGATTCCTGAAAACTTTATTT
CATTTGGTtgactagatcaaaagttatttcaCTTTCTGCATTATTATTTC
TTACTTTGCAAGGCGTCTGATCACTTTATATACTTTGCAGCTTTTTCATG
TAAAcatgatttttcaaatctttaaatTAATAGTAAAGCAATgagaattt
cttttaaatttgaaatttttacaaatttttactttaatattaatacctga
aattaaagaaaaaagtttgaaaaattcttagttTGAACTTTGAGATATCA
TTAAATTTGATCACGTGATAGATTTCAGGAAAGGTAGGCAAACCCAAAGG
TAGGTAAACCTTATCTCAAAATAATCTGCAGTTTATGTCatgatgataaa
attttagagtcaACCAACGAAAAATTATAGCATATCTTATAGCATGATAT
TTTATCACAGCTTGATTCAAAAGTTGAAACcttttttatccccactgtag
aaattttttaagtaaggcaagtacttttttattttctggtttacggacat
ttagagatgatcttttggaccggaggatggaaaaaaaataaaaataaaat
tgtcgttttcaaactttaatgttgTGTTGGAAAGaataaaatgtgttttg
agGAAACTTGCATACaccagaaaatcaaagaaagtttttcagctAGAAAA
TTTTGTTGAGCGCCATTGGATGAGGCATATTGGGAAAAAGAGATTGCTGT
ATCCTATTTTCTTCCTTTCCTGCTCTtataaaatgaagttttctaaaaaa
aatccatttcatGGCAGATCAAACAGAGTCGGAagtgcaaaaataaataa
aatttctgtgaatttcaattctatttttattttatttttgcaaaataatc
gtcggcgattccgtaaaccagaaaataaaaaagtaattgcctaagGGTAA
CTATTTTAATCCCAGTTCATGTAAAGTTAAAAGAATTTAGTATGTAGTAA
AGAAAAGGAATTCTGAATTTAAAAGCGTCATCATGAATTTGATTATAATT
AGTACACTGTTTGATCTAGCAGGTCGGACAGTTGGGTAGAGTGACTCGGA
CTCCAATCGTTGTTTTAGCTTACACTGCAGATGgcaatatcaaaagttat
ggtgaGATTTATCTTAGTTTTCTTGTGTATTTAGCGAAGAGATATAAACA
CTAGAAAGAAATTTAGTCAAATTGTAAATGAGCTGAAATTagtattataa
aaaacacttgCCAATCGTGCCAATAAGGTTCCACCTAAAACCTACTTCCA
AGCAATAAGGAAGGGAATGACTCAAAAGGTTTCAGTTCGAATTCCGACTC
GATCAGAAGGTATGGGACCTAGAGAAAAACCCTGTAAAACAATattaaaa
atttcacatttcACATGAGGAAAGGCAAGACAGAAAATTGACTGTCTAAA
CTTGGGCTTATTAAAGCCTTTCCCAtccaaaattatctttccaaggAGGA
AAGAtcttttattgtattttgaatTATACCGTTTTTCCTTAGAAATCAAT
GTATTACTGTATGCGGCACTTTATTTTTTAAGGTTGTTGATATTTAGTCA
AGATAAGtcattgtagaaaaaaaaagaaaaacgtgaagggtatttttgtt
aattatgtgtatttacggttatttatatttatggttgttgatattttata
taATGGCTTTTTCAAGGTTCATCAAAAGGAATGAAGGAATTTGCTCAAGA
CCCAGcaataattcaaaaattcaaagattCTCTTCCAAATAACGCAGGTA
TAACTTATACAGATAATTTACTAAACGgtcatagcttcagccaggtttct
agctccccccaacaaagtaaggtccccccaacaatttagctccccccaaa
aaattgtcttgtgctaggtcccctaaaACTTCAGGTCCCAAGATAAACTA
AAACACCCCcgtagagagaagtcaataaaaaatatatctaGTACAgcact
gataaatgaaaactaaattttacttgttttaatatttatgtttacaaatc
ttttgctttttatatttgatttaatagtaagataagagatattttgaatt
tagctgaacagcccccagagtctcagtcagatcatctaggctccccccaa
caatctaggtccccccaaatattttggtaattttagcccccaggctcttt
aaaggccaaaatatttcttagcccccccccaaaaataagggggggggctg
aacctatgacggttcccgtcgtcgcaaacgttGGTTAAGGTTTTGCTTGC
CCATCGAAAGCCCTTAAACTATAGGCGAGGGATGGGTTAAGGTAAGATGA
AagcaaagagaaaaacaaaacaattctcTTTGTATTTTGTGATATGTATG
CCAATTAATTGAAAAACTAAAggatttgtataaaaaataacataacGATC
TAATTTAAATTACGAAGGGTGCCCTTATACCTAGCAAGAAGCCTCAATTT
TCAAGGAGAGGGGCTCATTGTTCGCGAGTCATGCCGTCCAATATGTTAAC
TTAACGTGTTGATAACTTAAGACTGGTGAAATTACTCCCAATCCAATCCA
ACCCAACATGCATTTGATCCAACTTAGAATGATTTTGCATGAAATGCTGG
ATTCATTTGCACTGGCCTTTAGCGTGTTCGTAAAAATATGCGAAATCGTG
CAACGAAAAGAGTGCCACACCCctatatttgaaactttgtgacgtcgtgg
cacttttttcataaagttgacgtcagaactttctTTCGTTTTAAAATGGG
AGTGTAGGGGAATCTTCTAATGTgcgttttcttttttcccttttcaAACT
TAACTCGAGACTTTTCATCTCCAATTAAATAtattgaagatgaaaagttt
ACTCCCTTCAAGAAACGCTGAGCTTGCAAAGAGATTGCAGTTATTCAACC
AAcgatcaaaacaaaagatagcgCGCGGCGTAACTTTAGTTGTTCGATTC
AACACCGCAATTTCTTCactttaataaaacaatttaatGGCCAGAGAGTT
TACAATGCTTTGACTGCAAAGTCTCGATTAAGAATTGGAACGAATTGTCT
GCGTTTTGAATGGAGCTTTCGAATAACTTCAATCTCTATGCAAGCTCACC
GTTTTGGAAATTATAATGTCAGATTGGCTTTGACTGGGCTAGTGTGACAG
ACATTTTTCCAGAACTATAAAGGTTCATCCTTATCAGAGCTCATTTCGTT
TTGGTCAATCGAGAAAAAATGTTACCatcagtttgtttttatttacattt
tagcCTTTGAAGAAGAATCTTCAgagagtgaaagtgaaagtgaagatGAA
GAGGAAACTCCTGCAAAGAAACAAAAGCTTACTTTTGATGTTGATTGGGA
AGATAATCTAAAGGTTATCCCGAAACGTGACCTCCTGTGTGATATTACTT
ATCGATCAACAGGTTAGTTCCTATGCTTTAAAAAGTATCTATTCATTTAC
CTTATACCGTAGAAAACCCTTAAAAGTATGGTCAGTACTTAGAATTATAG
GTAGACAAACTTAGATTTTAAATACTTTAGGCTTCACAAAACGAACGATG
AAGTGGGTCGAACAGAATAAACCCAGTTGGTGGCCACGTCGAATATTGTT
TCGATCTCCTCATGGTAAAAGTAAAATTCCCGTGGCTGAAATGGACGATA
TCCTTCGATCATTCCATGAGCATAAAGTCATTAAAGCTGTCGTAAGTTTT
ATTCCCGTTTTGTGGAAAACATCAATTTAACAATTTGGAGGATTGTATGT
ACGTCAACTCTACGTCGATCTAGTAATTTCGTGATACATCCATAATTCGC
ATAGCTGCTTCAAAGTAACATAATCTTATATTGTTTTAGGAAAAACTGTG
CTCTGATGATGTAGACGTTTTCTTTCcaactttttccaaaatggaAGAAC
ATTTGAATTTATTCCTGAAGAAGGCTTCCATCATCACGGAGTGGTTGAAG
AGAAATAGAAAGATCCAAAGAGTTGCAATGGCAGATATCGAATACAGGTG
ATCCTTTTATCTAAGttcaatttcatttatttttttgtatttgtgtTTGA
AAGCCGCTCTAAAGAAATGCTGCCGCGATAATTAGGGGACCCATGGTTTG
GTGGTACTTCCATGGTGTACATTGAAACTTACTTTAAGTGACCTACGggt
aaaagttcaaaaacttgTCATGATGATATTTGTTGCCCTGTTAGTAGCTC
TATGCTCTTAGTAGCTTTTTACTAGTAAATATTCTATTTTGaataatata
aaattttattttgtcacTAGATGCCGGTATCTAACAACAAAGTTTGGCAC
GAGAAAGGAGCCCATCCTCTTTGGGTCAATACATCGTTGAACGCCGCATt
acgaaaaatttttcaaaattctatcgTTGGCATATGCTGTAAcgagaaaa
aatgatttaaataacTATGTAAGAATTGAAATTTGAATCGatttttgata
tgaatatagatgaatatatgtatatatatctacgtttgttattatatgtt
aattatatTTCATTCTAAGGGAACATCCGTCCttctttgaaaattattat
aaattttatCAATCTAGATTATGTATGTTTTTGGCTTTTATGCATTACCA
CTTTATTTCTAGATATGTGACGGAATAGATGATGTATCGCCGAAGAAGTT
TCAGTCATGGCTTAACGTCAAAGACATTAACAATTTGGAAGCATCACTTC
TTACAAATGCATTTGAATGTAACGGTAATAGTTATAAAATTTCTTAAGTT
ATGTGACTTTTCGTAACTTTCGCAATGTTGCGAAAGTCCAGTGGAGTTAG
AACCCTCGTATTTTAATTGGTTTAAAGATATATAGAAAACAATTATTCTA
ACTTTAATCACTTTTGTAAAAACTCTTCATCGCATGAAAAGACAATTGAT
TTTTGATAGATGAAAGACtaactttttaaacaaaaagtttatatttatTT
CACTTCATAACACTGTGAGAAAGGGTTATGTAGGTGTAACCTGACTCTCT
CTCCATCCGTATAACAGAAAAGAGTTAGACTCTGAACCACTCTTTGTTTG
TCTCGGAGAGACATAATGAAATAATATGAAGTAATACCCTccccccccAT
TTTATAAAGCTGACTTGTTCTGATGACTGATGACTGGGTTCCAATAAATC
TTCATCTTGATTCAATTCAATCGTAGGTATCAACTGATAAACTTATCTTT
TGACTCGACTTGACAAAACAGAAACTTATTGAGACACGACTGTACCGTAC
GAAATTGACTGAACACAATATTGGTTTATGTCTTATTTATGCTCGCAAAA
TCCTAACaggtttcatttatattttttgtcaaaatttttacTCTTGAATC
AGcctttttttacaaatattaaCAAAGTCCAATTTCAAGTGTGTATTCTA
ACATTTCTGGCTATCTGTTCTTGATGAAAACCAACGCATCAACTTTTTTA
agtcttgaaataattttcaatgaGAATAGAAATGTATTTAACGGTGATTC
TTGTTACTTCTATTCCAACTGTTATAGCAATGGTATCCTTGATTGGGCTG
GTCGTAGGGCTCAATAAAAATTTGGCAGTTCAAGACGGTGAAAGCGTGTA
CCGACTGACAAGGCAAGAAGACATTCCATGCGACATTGCCATTTTATGCG
GAAATGATCAATACGTGTACATGGCTGATGTGGATGAATTTGACGAGAAA
AAATGTCGAAGTCATAATATGTTTTGTTTCGATGATAGTGAAGAGGACGT
CATTGTGTGCCCAAATTGCCTACTCACCTACCACAACACGTGTGTGCGTT
GGAATGATGATTGTGGGTGTACTAAAATCCCTGAAATCAAATCGAGGTAC
AGTATAATCATCCAATAGAGGAAACTTAAAAAGGCAGACATCTCTGATTA
GGACGTAATGGTATTTTCCGCTTGCTAGTCAAAACCTCATcagaaacttt
tcaaaatagGTACACTTAATTAGATAAGGTTTCTACATGGAATTTTGTTG
GTCAGAAGCATACTTTTTCCTCTCAATTTATCATACACAACAGACATAAA
CTGgttaaaaaaggtcaaaaataaGAGTGTTTTATCTTATTACAGTAGTT
GACGCtcctaattcgatcttcaagggaaattggaaaaaaaaatgaattaa
tttaCTTGAATCCTAAActagaaagttttaaaagtttatgCCCTTAAACT
ATCTACTTTCGTCTTAGAATAACTGCAATGCTGGATAATCAAGTTATCAA
TACCTTTATGTGTGAGATTTACAAAAGAACAAATCAACTCACGGTGAGAT
ATTATATTACTAGTCCTACGCTATATACGCTTAACAATCGGGCTTTGTGG
TTTCATATACTATCAGTCGAATGTAAAACATGATCTTAGTCGCTCATGTT
TACTTGATGcggatttgaaatatttttttaaaaatagataaacttatttt
tcagaaaaaggcaTCTAATATGTTAAATGGGCATCAAAAATCTGCAAGGA
GTGAACTGATCCATGCCAGGGTAAATGAAGGAAGATGTGGAGTATTGACA
AAGatgaatttgttttcaaaaacaataccTGACCAAGTCGTAAGCGAAAA
CTATTTTACATTATATACAGTGTACCCTTAAAAAGTGTA Coding sequence (CDS) from alignment at sc0000137_pilon:867713..874551+ >MSTRG.15513.2.p1 ID=MSTRG.15513.2.p1|Name=MSTRG.15513.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3075bp|location=Sequence derived from alignment at sc0000137_pilon:867713..874551+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGGAATTTGCTCAAGACCCAGcaataattcaaaaattcaaagattC
TCTTCCAAATAACGCAGcCTTTGAAGAAGAATCTTCAgagagtgaaagtg
aaagtgaagatGAAGAGGAAACTCCTGCAAAGAAACAAAAGCTTACTTTT
GATGTTGATTGGGAAGATAATCTAAAGGTTATCCCGAAACGTGACCTCCT
GTGTGATATTACTTATCGATCAACAGGCTTCACAAAACGAACGATGAAGT
GGGTCGAACAGAATAAACCCAGTTGGTGGCCACGTCGAATATTGTTTCGA
TCTCCTCATGGTAAAAGTAAAATTCCCGTGGCTGAAATGGACGATATCCT
TCGATCATTCCATGAGCATAAAGTCATTAAAGCTGTCGAAAAACTGTGCT
CTGATGATGTAGACGTTTTCTTTCcaactttttccaaaatggaAGAACAT
TTGAATTTATTCCTGAAGAAGGCTTCCATCATCACGGAGTGGTTGAAGAG
AAATAGAAAGATCCAAAGAGTTGCAATGGCAGATATCGAATACAGATGCC
GGTATCTAACAACAAAGTTTGGCACGAGAAAGGAGCCCATCCTCTTTGGG
TCAATACATCGTTGAATGAAGGAATTTGCTCAAGACCCAGcaataattca
aaaattcaaagattCTCTTCCAAATAACGCAGcCTTTGAAGAAGAATCTT
CAgagagtgaaagtgaaagtgaagatGAAGAGGAAACTCCTGCAAAGAAA
CAAAAGCTTACTTTTGATGTTGATTGGGAAGATAATCTAAAGGTTATCCC
GAAACGTGACCTCCTGTGTGATATTACTTATCGATCAACAGGCTTCACAA
AACGAACGATGAAGTGGGTCGAACAGAATAAACCCAGTTGGTGGCCACGT
CGAATATTGTTTCGATCTCCTCATGGTAAAAGTAAAATTCCCGTGGCTGA
AATGGACGATATCCTTCGATCATTCCATGAGCATAAAGTCATTAAAGCTG
TCGAAAAACTGTGCTCTGATGATGTAGACGTTTTCTTTCcaactttttcc
aaaatggaAGAACATTTGAATTTATTCCTGAAGAAGGCTTCCATCATCAC
GGAGTGGTTGAAGAGAAATAGAAAGATCCAAAGAGTTGCAATGGCAGATA
TCGAATACAGATGCCGGTATCTAACAACAAAGTTTGGCACGAGAAAGGAG
CCCATCCTCTTTGGGTCAATACATCGTTGAATGAAGGAATTTGCTCAAGA
CCCAGcaataattcaaaaattcaaagattCTCTTCCAAATAACGCAGcCT
TTGAAGAAGAATCTTCAgagagtgaaagtgaaagtgaagatGAAGAGGAA
ACTCCTGCAAAGAAACAAAAGCTTACTTTTGATGTTGATTGGGAAGATAA
TCTAAAGGTTATCCCGAAACGTGACCTCCTGTGTGATATTACTTATCGAT
CAACAGGCTTCACAAAACGAACGATGAAGTGGGTCGAACAGAATAAACCC
AGTTGGTGGCCACGTCGAATATTGTTTCGATCTCCTCATGGTAAAAGTAA
AATTCCCGTGGCTGAAATGGACGATATCCTTCGATCATTCCATGAGCATA
AAGTCATTAAAGCTGTCGAAAAACTGTGCTCTGATGATGTAGACGTTTTC
TTTCcaactttttccaaaatggaAGAACATTTGAATTTATTCCTGAAGAA
GGCTTCCATCATCACGGAGTGGTTGAAGAGAAATAGAAAGATCCAAAGAG
TTGCAATGGCAGATATCGAATACAGATGCCGGTATCTAACAACAAAGTTT
GGCACGAGAAAGGAGCCCATCCTCTTTGGGTCAATACATCGTTGAATGAA
GGAATTTGCTCAAGACCCAGcaataattcaaaaattcaaagattCTCTTC
CAAATAACGCAGcCTTTGAAGAAGAATCTTCAgagagtgaaagtgaaagt
gaagatGAAGAGGAAACTCCTGCAAAGAAACAAAAGCTTACTTTTGATGT
TGATTGGGAAGATAATCTAAAGGTTATCCCGAAACGTGACCTCCTGTGTG
ATATTACTTATCGATCAACAGGCTTCACAAAACGAACGATGAAGTGGGTC
GAACAGAATAAACCCAGTTGGTGGCCACGTCGAATATTGTTTCGATCTCC
TCATGGTAAAAGTAAAATTCCCGTGGCTGAAATGGACGATATCCTTCGAT
CATTCCATGAGCATAAAGTCATTAAAGCTGTCGAAAAACTGTGCTCTGAT
GATGTAGACGTTTTCTTTCcaactttttccaaaatggaAGAACATTTGAA
TTTATTCCTGAAGAAGGCTTCCATCATCACGGAGTGGTTGAAGAGAAATA
GAAAGATCCAAAGAGTTGCAATGGCAGATATCGAATACAGATGCCGGTAT
CTAACAACAAAGTTTGGCACGAGAAAGGAGCCCATCCTCTTTGGGTCAAT
ACATCGTTGAATGAAGGAATTTGCTCAAGACCCAGcaataattcaaaaat
tcaaagattCTCTTCCAAATAACGCAGcCTTTGAAGAAGAATCTTCAgag
agtgaaagtgaaagtgaagatGAAGAGGAAACTCCTGCAAAGAAACAAAA
GCTTACTTTTGATGTTGATTGGGAAGATAATCTAAAGGTTATCCCGAAAC
GTGACCTCCTGTGTGATATTACTTATCGATCAACAGGCTTCACAAAACGA
ACGATGAAGTGGGTCGAACAGAATAAACCCAGTTGGTGGCCACGTCGAAT
ATTGTTTCGATCTCCTCATGGTAAAAGTAAAATTCCCGTGGCTGAAATGG
ACGATATCCTTCGATCATTCCATGAGCATAAAGTCATTAAAGCTGTCGAA
AAACTGTGCTCTGATGATGTAGACGTTTTCTTTCcaactttttccaaaat
ggaAGAACATTTGAATTTATTCCTGAAGAAGGCTTCCATCATCACGGAGT
GGTTGAAGAGAAATAGAAAGATCCAAAGAGTTGCAATGGCAGATATCGAA
TACAGATGCCGGTATCTAACAACAAAGTTTGGCACGAGAAAGGAGCCCAT
CCTCTTTGGGTCAATACATCGTTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000137_pilon | genome | sc0000137_pilon:867713..874551 + |
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