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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000137_pilon:867614..874551+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.15513.1.p1 ID=MSTRG.15513.1.p1|Name=MSTRG.15513.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6938bp|location=Sequence derived from alignment at sc0000137_pilon:867614..874551+ (Clytia hemisphaerica_ch_hm2_pilon)
tttAATCAGAGAGCAATTTTGTGATCGAAATTTTAGGGTTATATTCTGTT
ATAAAttgaaaagtaacaaaatttaatttatatgGATTGTCTCTTTCAGT
TTACATTCATTGAGAATGCTTCTAAGAGAAAGCAGAGTGAGAAgggaaaa
ttaaaatcaattcgAAATAAGGTAAGAAAAAGACCTTTCCTGAAGCCCCC
TTTAGAGTGACTTTTGATTAAgataaattttgattgattgcACATATGAC
TggttgagtttttttttggtATAGTGAGAGATTCCTGAAAACTTTATTTC
ATTTGGTtgactagatcaaaagttatttcaCTTTCTGCATTATTATTTCT
TACTTTGCAAGGCGTCTGATCACTTTATATACTTTGCAGCTTTTTCATGT
AAAcatgatttttcaaatctttaaatTAATAGTAAAGCAATgagaatttc
ttttaaatttgaaatttttacaaatttttactttaatattaatacctgaa
attaaagaaaaaagtttgaaaaattcttagttTGAACTTTGAGATATCAT
TAAATTTGATCACGTGATAGATTTCAGGAAAGGTAGGCAAACCCAAAGGT
AGGTAAACCTTATCTCAAAATAATCTGCAGTTTATGTCatgatgataaaa
ttttagagtcaACCAACGAAAAATTATAGCATATCTTATAGCATGATATT
TTATCACAGCTTGATTCAAAAGTTGAAACcttttttatccccactgtaga
aattttttaagtaaggcaagtacttttttattttctggtttacggacatt
tagagatgatcttttggaccggaggatggaaaaaaaataaaaataaaatt
gtcgttttcaaactttaatgttgTGTTGGAAAGaataaaatgtgttttga
gGAAACTTGCATACaccagaaaatcaaagaaagtttttcagctAGAAAAT
TTTGTTGAGCGCCATTGGATGAGGCATATTGGGAAAAAGAGATTGCTGTA
TCCTATTTTCTTCCTTTCCTGCTCTtataaaatgaagttttctaaaaaaa
atccatttcatGGCAGATCAAACAGAGTCGGAagtgcaaaaataaataaa
atttctgtgaatttcaattctatttttattttatttttgcaaaataatcg
tcggcgattccgtaaaccagaaaataaaaaagtaattgcctaagGGTAAC
TATTTTAATCCCAGTTCATGTAAAGTTAAAAGAATTTAGTATGTAGTAAA
GAAAAGGAATTCTGAATTTAAAAGCGTCATCATGAATTTGATTATAATTA
GTACACTGTTTGATCTAGCAGGTCGGACAGTTGGGTAGAGTGACTCGGAC
TCCAATCGTTGTTTTAGCTTACACTGCAGATGgcaatatcaaaagttatg
gtgaGATTTATCTTAGTTTTCTTGTGTATTTAGCGAAGAGATATAAACAC
TAGAAAGAAATTTAGTCAAATTGTAAATGAGCTGAAATTagtattataaa
aaacacttgCCAATCGTGCCAATAAGGTTCCACCTAAAACCTACTTCCAA
GCAATAAGGAAGGGAATGACTCAAAAGGTTTCAGTTCGAATTCCGACTCG
ATCAGAAGGTATGGGACCTAGAGAAAAACCCTGTAAAACAATattaaaaa
tttcacatttcACATGAGGAAAGGCAAGACAGAAAATTGACTGTCTAAAC
TTGGGCTTATTAAAGCCTTTCCCAtccaaaattatctttccaaggAGGAA
AGAtcttttattgtattttgaatTATACCGTTTTTCCTTAGAAATCAATG
TATTACTGTATGCGGCACTTTATTTTTTAAGGTTGTTGATATTTAGTCAA
GATAAGtcattgtagaaaaaaaaagaaaaacgtgaagggtatttttgtta
attatgtgtatttacggttatttatatttatggttgttgatattttatat
aATGGCTTTTTCAAGGTTCATCAAAAGGAATGAAGGAATTTGCTCAAGAC
CCAGcaataattcaaaaattcaaagattCTCTTCCAAATAACGCAGGTAT
AACTTATACAGATAATTTACTAAACGgtcatagcttcagccaggtttcta
gctccccccaacaaagtaaggtccccccaacaatttagctccccccaaaa
aattgtcttgtgctaggtcccctaaaACTTCAGGTCCCAAGATAAACTAA
AACACCCCcgtagagagaagtcaataaaaaatatatctaGTACAgcactg
ataaatgaaaactaaattttacttgttttaatatttatgtttacaaatct
tttgctttttatatttgatttaatagtaagataagagatattttgaattt
agctgaacagcccccagagtctcagtcagatcatctaggctccccccaac
aatctaggtccccccaaatattttggtaattttagcccccaggctcttta
aaggccaaaatatttcttagcccccccccaaaaataagggggggggctga
acctatgacggttcccgtcgtcgcaaacgttGGTTAAGGTTTTGCTTGCC
CATCGAAAGCCCTTAAACTATAGGCGAGGGATGGGTTAAGGTAAGATGAA
agcaaagagaaaaacaaaacaattctcTTTGTATTTTGTGATATGTATGC
CAATTAATTGAAAAACTAAAggatttgtataaaaaataacataacGATCT
AATTTAAATTACGAAGGGTGCCCTTATACCTAGCAAGAAGCCTCAATTTT
CAAGGAGAGGGGCTCATTGTTCGCGAGTCATGCCGTCCAATATGTTAACT
TAACGTGTTGATAACTTAAGACTGGTGAAATTACTCCCAATCCAATCCAA
CCCAACATGCATTTGATCCAACTTAGAATGATTTTGCATGAAATGCTGGA
TTCATTTGCACTGGCCTTTAGCGTGTTCGTAAAAATATGCGAAATCGTGC
AACGAAAAGAGTGCCACACCCctatatttgaaactttgtgacgtcgtggc
acttttttcataaagttgacgtcagaactttctTTCGTTTTAAAATGGGA
GTGTAGGGGAATCTTCTAATGTgcgttttcttttttcccttttcaAACTT
AACTCGAGACTTTTCATCTCCAATTAAATAtattgaagatgaaaagtttA
CTCCCTTCAAGAAACGCTGAGCTTGCAAAGAGATTGCAGTTATTCAACCA
AcgatcaaaacaaaagatagcgCGCGGCGTAACTTTAGTTGTTCGATTCA
ACACCGCAATTTCTTCactttaataaaacaatttaatGGCCAGAGAGTTT
ACAATGCTTTGACTGCAAAGTCTCGATTAAGAATTGGAACGAATTGTCTG
CGTTTTGAATGGAGCTTTCGAATAACTTCAATCTCTATGCAAGCTCACCG
TTTTGGAAATTATAATGTCAGATTGGCTTTGACTGGGCTAGTGTGACAGA
CATTTTTCCAGAACTATAAAGGTTCATCCTTATCAGAGCTCATTTCGTTT
TGGTCAATCGAGAAAAAATGTTACCatcagtttgtttttatttacatttt
agcCTTTGAAGAAGAATCTTCAgagagtgaaagtgaaagtgaagatGAAG
AGGAAACTCCTGCAAAGAAACAAAAGCTTACTTTTGATGTTGATTGGGAA
GATAATCTAAAGGTTATCCCGAAACGTGACCTCCTGTGTGATATTACTTA
TCGATCAACAGGTTAGTTCCTATGCTTTAAAAAGTATCTATTCATTTACC
TTATACCGTAGAAAACCCTTAAAAGTATGGTCAGTACTTAGAATTATAGG
TAGACAAACTTAGATTTTAAATACTTTAGGCTTCACAAAACGAACGATGA
AGTGGGTCGAACAGAATAAACCCAGTTGGTGGCCACGTCGAATATTGTTT
CGATCTCCTCATGGTAAAAGTAAAATTCCCGTGGCTGAAATGGACGATAT
CCTTCGATCATTCCATGAGCATAAAGTCATTAAAGCTGTCGTAAGTTTTA
TTCCCGTTTTGTGGAAAACATCAATTTAACAATTTGGAGGATTGTATGTA
CGTCAACTCTACGTCGATCTAGTAATTTCGTGATACATCCATAATTCGCA
TAGCTGCTTCAAAGTAACATAATCTTATATTGTTTTAGGAAAAACTGTGC
TCTGATGATGTAGACGTTTTCTTTCcaactttttccaaaatggaAGAACA
TTTGAATTTATTCCTGAAGAAGGCTTCCATCATCACGGAGTGGTTGAAGA
GAAATAGAAAGATCCAAAGAGTTGCAATGGCAGATATCGAATACAGGTGA
TCCTTTTATCTAAGttcaatttcatttatttttttgtatttgtgtTTGAA
AGCCGCTCTAAAGAAATGCTGCCGCGATAATTAGGGGACCCATGGTTTGG
TGGTACTTCCATGGTGTACATTGAAACTTACTTTAAGTGACCTACGggta
aaagttcaaaaacttgTCATGATGATATTTGTTGCCCTGTTAGTAGCTCT
ATGCTCTTAGTAGCTTTTTACTAGTAAATATTCTATTTTGaataatataa
aattttattttgtcacTAGATGCCGGTATCTAACAACAAAGTTTGGCACG
AGAAAGGAGCCCATCCTCTTTGGGTCAATACATCGTTGAACGCCGCATta
cgaaaaatttttcaaaattctatcgTTGGCATATGCTGTAAcgagaaaaa
atgatttaaataacTATGTAAGAATTGAAATTTGAATCGatttttgatat
gaatatagatgaatatatgtatatatatctacgtttgttattatatgtta
attatatTTCATTCTAAGGGAACATCCGTCCttctttgaaaattattata
aattttatCAATCTAGATTATGTATGTTTTTGGCTTTTATGCATTACCAC
TTTATTTCTAGATATGTGACGGAATAGATGATGTATCGCCGAAGAAGTTT
CAGTCATGGCTTAACGTCAAAGACATTAACAATTTGGAAGCATCACTTCT
TACAAATGCATTTGAATGTAACGGTAATAGTTATAAAATTTCTTAAGTTA
TGTGACTTTTCGTAACTTTCGCAATGTTGCGAAAGTCCAGTGGAGTTAGA
ACCCTCGTATTTTAATTGGTTTAAAGATATATAGAAAACAATTATTCTAA
CTTTAATCACTTTTGTAAAAACTCTTCATCGCATGAAAAGACAATTGATT
TTTGATAGATGAAAGACtaactttttaaacaaaaagtttatatttatTTC
ACTTCATAACACTGTGAGAAAGGGTTATGTAGGTGTAACCTGACTCTCTC
TCCATCCGTATAACAGAAAAGAGTTAGACTCTGAACCACTCTTTGTTTGT
CTCGGAGAGACATAATGAAATAATATGAAGTAATACCCTccccccccATT
TTATAAAGCTGACTTGTTCTGATGACTGATGACTGGGTTCCAATAAATCT
TCATCTTGATTCAATTCAATCGTAGGTATCAACTGATAAACTTATCTTTT
GACTCGACTTGACAAAACAGAAACTTATTGAGACACGACTGTACCGTACG
AAATTGACTGAACACAATATTGGTTTATGTCTTATTTATGCTCGCAAAAT
CCTAACaggtttcatttatattttttgtcaaaatttttacTCTTGAATCA
GcctttttttacaaatattaaCAAAGTCCAATTTCAAGTGTGTATTCTAA
CATTTCTGGCTATCTGTTCTTGATGAAAACCAACGCATCAACTTTTTTAa
gtcttgaaataattttcaatgaGAATAGAAATGTATTTAACGGTGATTCT
TGTTACTTCTATTCCAACTGTTATAGCAATGGTATCCTTGATTGGGCTGG
TCGTAGGGCTCAATAAAAATTTGGCAGTTCAAGACGGTGAAAGCGTGTAC
CGACTGACAAGGCAAGAAGACATTCCATGCGACATTGCCATTTTATGCGG
AAATGATCAATACGTGTACATGGCTGATGTGGATGAATTTGACGAGAAAA
AATGTCGAAGTCATAATATGTTTTGTTTCGATGATAGTGAAGAGGACGTC
ATTGTGTGCCCAAATTGCCTACTCACCTACCACAACACGTGTGTGCGTTG
GAATGATGATTGTGGGTGTACTAAAATCCCTGAAATCAAATCGAGGTACA
GTATAATCATCCAATAGAGGAAACTTAAAAAGGCAGACATCTCTGATTAG
GACGTAATGGTATTTTCCGCTTGCTAGTCAAAACCTCATcagaaactttt
caaaatagGTACACTTAATTAGATAAGGTTTCTACATGGAATTTTGTTGG
TCAGAAGCATACTTTTTCCTCTCAATTTATCATACACAACAGACATAAAC
TGgttaaaaaaggtcaaaaataaGAGTGTTTTATCTTATTACAGTAGTTG
ACGCtcctaattcgatcttcaagggaaattggaaaaaaaaatgaattaat
ttaCTTGAATCCTAAActagaaagttttaaaagtttatgCCCTTAAACTA
TCTACTTTCGTCTTAGAATAACTGCAATGCTGGATAATCAAGTTATCAAT
ACCTTTATGTGTGAGATTTACAAAAGAACAAATCAACTCACGGTGAGATA
TTATATTACTAGTCCTACGCTATATACGCTTAACAATCGGGCTTTGTGGT
TTCATATACTATCAGTCGAATGTAAAACATGATCTTAGTCGCTCATGTTT
ACTTGATGcggatttgaaatatttttttaaaaatagataaacttattttt
cagaaaaaggcaTCTAATATGTTAAATGGGCATCAAAAATCTGCAAGGAG
TGAACTGATCCATGCCAGGGTAAATGAAGGAAGATGTGGAGTATTGACAA
AGatgaatttgttttcaaaaacaataccTGACCAAGTCGTAAGCGAAAAC
TATTTTACATTATATACAGTGTACCCTTAAAAAGTGTA Coding sequence (CDS) from alignment at sc0000137_pilon:867614..874551+ >MSTRG.15513.1.p1 ID=MSTRG.15513.1.p1|Name=MSTRG.15513.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3075bp|location=Sequence derived from alignment at sc0000137_pilon:867614..874551+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGGAATTTGCTCAAGACCCAGcaataattcaaaaattcaaagattC
TCTTCCAAATAACGCAGcCTTTGAAGAAGAATCTTCAgagagtgaaagtg
aaagtgaagatGAAGAGGAAACTCCTGCAAAGAAACAAAAGCTTACTTTT
GATGTTGATTGGGAAGATAATCTAAAGGTTATCCCGAAACGTGACCTCCT
GTGTGATATTACTTATCGATCAACAGGCTTCACAAAACGAACGATGAAGT
GGGTCGAACAGAATAAACCCAGTTGGTGGCCACGTCGAATATTGTTTCGA
TCTCCTCATGGTAAAAGTAAAATTCCCGTGGCTGAAATGGACGATATCCT
TCGATCATTCCATGAGCATAAAGTCATTAAAGCTGTCGAAAAACTGTGCT
CTGATGATGTAGACGTTTTCTTTCcaactttttccaaaatggaAGAACAT
TTGAATTTATTCCTGAAGAAGGCTTCCATCATCACGGAGTGGTTGAAGAG
AAATAGAAAGATCCAAAGAGTTGCAATGGCAGATATCGAATACAGATGCC
GGTATCTAACAACAAAGTTTGGCACGAGAAAGGAGCCCATCCTCTTTGGG
TCAATACATCGTTGAATGAAGGAATTTGCTCAAGACCCAGcaataattca
aaaattcaaagattCTCTTCCAAATAACGCAGcCTTTGAAGAAGAATCTT
CAgagagtgaaagtgaaagtgaagatGAAGAGGAAACTCCTGCAAAGAAA
CAAAAGCTTACTTTTGATGTTGATTGGGAAGATAATCTAAAGGTTATCCC
GAAACGTGACCTCCTGTGTGATATTACTTATCGATCAACAGGCTTCACAA
AACGAACGATGAAGTGGGTCGAACAGAATAAACCCAGTTGGTGGCCACGT
CGAATATTGTTTCGATCTCCTCATGGTAAAAGTAAAATTCCCGTGGCTGA
AATGGACGATATCCTTCGATCATTCCATGAGCATAAAGTCATTAAAGCTG
TCGAAAAACTGTGCTCTGATGATGTAGACGTTTTCTTTCcaactttttcc
aaaatggaAGAACATTTGAATTTATTCCTGAAGAAGGCTTCCATCATCAC
GGAGTGGTTGAAGAGAAATAGAAAGATCCAAAGAGTTGCAATGGCAGATA
TCGAATACAGATGCCGGTATCTAACAACAAAGTTTGGCACGAGAAAGGAG
CCCATCCTCTTTGGGTCAATACATCGTTGAATGAAGGAATTTGCTCAAGA
CCCAGcaataattcaaaaattcaaagattCTCTTCCAAATAACGCAGcCT
TTGAAGAAGAATCTTCAgagagtgaaagtgaaagtgaagatGAAGAGGAA
ACTCCTGCAAAGAAACAAAAGCTTACTTTTGATGTTGATTGGGAAGATAA
TCTAAAGGTTATCCCGAAACGTGACCTCCTGTGTGATATTACTTATCGAT
CAACAGGCTTCACAAAACGAACGATGAAGTGGGTCGAACAGAATAAACCC
AGTTGGTGGCCACGTCGAATATTGTTTCGATCTCCTCATGGTAAAAGTAA
AATTCCCGTGGCTGAAATGGACGATATCCTTCGATCATTCCATGAGCATA
AAGTCATTAAAGCTGTCGAAAAACTGTGCTCTGATGATGTAGACGTTTTC
TTTCcaactttttccaaaatggaAGAACATTTGAATTTATTCCTGAAGAA
GGCTTCCATCATCACGGAGTGGTTGAAGAGAAATAGAAAGATCCAAAGAG
TTGCAATGGCAGATATCGAATACAGATGCCGGTATCTAACAACAAAGTTT
GGCACGAGAAAGGAGCCCATCCTCTTTGGGTCAATACATCGTTGAATGAA
GGAATTTGCTCAAGACCCAGcaataattcaaaaattcaaagattCTCTTC
CAAATAACGCAGcCTTTGAAGAAGAATCTTCAgagagtgaaagtgaaagt
gaagatGAAGAGGAAACTCCTGCAAAGAAACAAAAGCTTACTTTTGATGT
TGATTGGGAAGATAATCTAAAGGTTATCCCGAAACGTGACCTCCTGTGTG
ATATTACTTATCGATCAACAGGCTTCACAAAACGAACGATGAAGTGGGTC
GAACAGAATAAACCCAGTTGGTGGCCACGTCGAATATTGTTTCGATCTCC
TCATGGTAAAAGTAAAATTCCCGTGGCTGAAATGGACGATATCCTTCGAT
CATTCCATGAGCATAAAGTCATTAAAGCTGTCGAAAAACTGTGCTCTGAT
GATGTAGACGTTTTCTTTCcaactttttccaaaatggaAGAACATTTGAA
TTTATTCCTGAAGAAGGCTTCCATCATCACGGAGTGGTTGAAGAGAAATA
GAAAGATCCAAAGAGTTGCAATGGCAGATATCGAATACAGATGCCGGTAT
CTAACAACAAAGTTTGGCACGAGAAAGGAGCCCATCCTCTTTGGGTCAAT
ACATCGTTGAATGAAGGAATTTGCTCAAGACCCAGcaataattcaaaaat
tcaaagattCTCTTCCAAATAACGCAGcCTTTGAAGAAGAATCTTCAgag
agtgaaagtgaaagtgaagatGAAGAGGAAACTCCTGCAAAGAAACAAAA
GCTTACTTTTGATGTTGATTGGGAAGATAATCTAAAGGTTATCCCGAAAC
GTGACCTCCTGTGTGATATTACTTATCGATCAACAGGCTTCACAAAACGA
ACGATGAAGTGGGTCGAACAGAATAAACCCAGTTGGTGGCCACGTCGAAT
ATTGTTTCGATCTCCTCATGGTAAAAGTAAAATTCCCGTGGCTGAAATGG
ACGATATCCTTCGATCATTCCATGAGCATAAAGTCATTAAAGCTGTCGAA
AAACTGTGCTCTGATGATGTAGACGTTTTCTTTCcaactttttccaaaat
ggaAGAACATTTGAATTTATTCCTGAAGAAGGCTTCCATCATCACGGAGT
GGTTGAAGAGAAATAGAAAGATCCAAAGAGTTGCAATGGCAGATATCGAA
TACAGATGCCGGTATCTAACAACAAAGTTTGGCACGAGAAAGGAGCCCAT
CCTCTTTGGGTCAATACATCGTTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000137_pilon | genome | sc0000137_pilon:867614..874551 + |
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