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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000137_pilon:325276..329151- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.15493.3.p1 ID=MSTRG.15493.3.p1|Name=MSTRG.15493.3.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3876bp|location=Sequence derived from alignment at sc0000137_pilon:325276..329151- (Clytia hemisphaerica_ch_hm2_pilon)
TTTTTACGTCAGAGTGTTTTGAATGCGTCTTATTGGTCCTTACATTCCAT
GTGTTAACATGTAGAAAACGTATTTTGGTACGTTGATGCGTCACTTAAAA
ATTCGAAAACCAAAAAAATCATTTTCAATCAGAGTATTCAAGAGATAGAC
AGCGCGTTATGGATGCTCAATTGAATTAAGGTACATATACAATCAATTCA
GTGAGTTTACAATTTGTTTTACGGTTTACCTTTATTGCTCGCCTCTTTTT
GGAAATTCATTTTGAAAGGCTCGTAATGCACACAGATAAAATAAGGAGGT
TTCAATCACCTTTTTTGATTATTTGGAATAAGCTTTTAATTTCTAGAGGT
CAGGACGAAAATGTATTTTAAATCTTAATTGTTATTGGAATTTCTTCATG
TGCGTTGGTGTCGAGACCGATTATCTTAACCTGTTCTGTAGATATTTCTC
TACCGATAACATATATTATCACCATTTTCGCTTGTTTCTTTTCTGTCGCT
TATAATGAATCAAAATTTGTGCAGAATCTTTTTATCAGATCAAAAGAGAG
GGGATGCAATTCTTACGAAATTGAATGTTAAAAGATGACGATGTAGTGAT
TTGTTGCTCTTAAGCAACTTGACACCTTTCTGGGTATATTTAGTTATGTG
GTAACTAGAGAAGTAAGAGAATATAAAAAAGAGAAAGTGTTAACACAACT
TTTTTGTCCCGACCAAATAAAATAACGGAAGGTTAGGTGAAATTGAAAGA
ATTTATATGTGGAATATCTTACGATCTTTTGTTGCTTTTACGTAGCTGCG
AAGAGTTGCTGGTGCAGCTGGCCTTCATATGATATCGGCCGATGTTTATA
CTTCTTCGTTTCCCTATTTTCCATTTTCTATGTTTATTTACGTGTTGCAA
AACATGGTTGAATTGTTTTCGTACGAATTTGCTTTGTTTATTAAGACACC
TTTTTCATTGCTTGAACAGAACTTATTCTACGGCACATGATATATACTTT
TTTGTAAACTTTTGAGAAAGATTTTGGTCGAGACGAAGAGCATAAAAAGT
AATGTAAAGCAGAATCTCTCATTTTCTCTCACTTATCAAAGTGTTGTTGT
TGTGTAAAACGTTTAAGTCGTGTGTTATGGTTAGTAGTTGATGGATCTTG
GTAGAAGTGAGCGGTTCTGTGTGGGCACCTCAAAGATTGTTATAATTGTT
AGGGTTGAAATTGTTTCTCATCCAATTGGTAGTTTGAAGTTGTTTCAAAC
GAATGCTACTGTAGAGTTTATAAAACTTTTCCTCATGCTTAAACGCTCCT
GAAGCTTAGAACTAAGAAAGTATACACTTATTTTTGGTGCTTTTAGTCTA
AAAGGTTTAATACCCTTCTTTATTAGTTTGTCCCATAATTCAAAGTTCAG
CCATTCCAGGCTCAGCATTGTTCTTAAATTGTTCTTATTTTTTACCAATT
TTGAGGTTCATTGTTCTTGTTCGATGTTGTTAAAATTATTCTTGTAAAAA
AGAGAGGGTGTATATACTTTGTCTGGTTTTGAGGCCCGGGTACGATTTCC
ACTGACACCAATATTACTGTGTGTTCATTCGTTTTGGTAAATATAATAAT
TCATTTTGTTCGTTCCCTTTTTCAGACAAACGTAAATGTATTTCCACCAA
GGAAGAAATCATCCATCGCTTCAGTGAGCCATCAGTCGTCTTCATCCATG
GAATTTGATGGATTATGTCCATGGAGATGCGGTCAATCAGTCACCTTTGA
AACACTCAACCACCACGTGTACCAATGCAACAAAGCTAATGCGCATGACC
AATGCCCCTTCCAGGTGTTAGGATGCACTTATGATGTGAGTTCTTACAAG
GATTTTAGAAATATGGCCACTTGCTATATATTCCGAAATGATTGTTTGAA
GAATTTTCCTCACTTGCATGGAGTTTGGAAAAAAGCTCTTAGGAGGAGAT
TTTTTCAAAGTTGATCCCATGGCTACTACAAGTTACTTTCCAGCAAAGTT
TCTGTTTAAAAGTAAAGTGTTAATGAGCGGAAAATGGATTCTGGGATGAA
GCTTTACTTGATTTTCCTGTTTTTCCAATGTTGTGTCAATACTTTTTACG
TCAAATATTTAGAAAAGCGCGGCTTAAATTTCAAGTCCCCTCTTAGAAAC
GAATAACTTGTGGTTGATTTATAAACAAACTTTGTAATATCTCTCATCTC
TATGGAAGTTCGACTTTCCCCTTTACAATGCAATCTCTCAAATGTTTTTT
TTGGTAACTGTCTGAGGTCACTGCCCGGCTCTTTCCTTCACTATTACAGC
TTTCATTTCGTACAAGATACAGAAAGCTTCTTTCTACGAAAATTTTCCGC
TATGAAATGACTGAAGAAAAAACACACTTAAAAAGAATGGAAACGATTGC
GTGACAAAGTGCAAAAGGGTTTGTTTTTAATGAAGTGTTATAACTTCCAT
TGTTGCTTCTGTTTATTTATAGGGATCAATAGACGTCAAGGAGCACATGC
TAATAGAGAACGCGTCACACGCTAGTCTGTTGGTACCTCACGTCCTCAAA
AATATGGTCTCACAAGATAAGACCGATTCTGCTATGCAACACCAAGCCGA
AGATACTGCAGACTTGAGAAGACGTCTGGAAAATGAATCAACTAAGAACT
CTATTTTATCGAACGAAGTATGTCAGTTGAAGAGAGAACTAGCAGAGTCG
AATAAAAAACTTAATTCTTTAGAGAAAGACATGGCAGTGGTTCGATCCAC
TTTTGATGTGCTGCTTCGTGAATTAAACAGTGTGAAAAATCAAGCGGTGT
CAGAGGAGCGCATCAAAAGTGTGGAAGAAACAACGGACAAACTAAAATTG
GAGAACGCAAATGTGACAAAAAGCGTCGTGGAGAACCACAGTCTGATCAT
GCGTCTCGATGAACGAATCAATAACGTCAACTCAAACCTGGGTGACGTCG
ATTTGAGACAACAAATACTAGAGAACACTTCTGTCGGTGGTCGATTCATT
TGGAAAATCGATCGACTGAGATCTCGCATCAAACACTCAGCAGTGGGTAA
GGTCGCTGCTTTACACAGTGCACCGTGTTTTACTAAAAGGTTTGGGTACA
AGTTTTGCACGCGTTTATATTTGAACGGCGACGGAGTGGGTAAAGATACG
CACGTTTCGCTCTTTATTGTCATCATGCGTTCGGAGTACGACGCTCTATT
AGAATGGCCGTTTCGTCAGAAAGTGACTTTTAATTTGTTTAACTACGCCA
ACCCGAACGATTCGTTAAAAGAATCGTTCATACCTGATGTTAGTTCGCCC
AGCTTCAAACGGCCTCATAAAGAAATGAACCTTGCAGCTGGTTGTCCGAT
GTTCGTAACGAAGGAACGATTGGAAACGTTCATTTTGGATGATAGTATTT
ATATAGAAACTACTGTTGGAGATGCCTGATTCGCCTTATTCTTGTTTTAT
CATCCTTCTGATCGAGATATGAATCCACATCTCAGCTTTGACAATCCGTT
TTTCGAGGGTAATCAAGTTCAGGCATTTTCGTTTTAGTTGTATAGGGCAA
GTAGAAAAGCCCATATGATAGGTACCTATATTGCCATAAAGGTTGGCATG
ATTGCATCTTATGAGAAGAAAAATGAAACAATTTACAGAAAGTCGTTTGT
GAAAACGGTTTTTGTATTTGACCAGTTCATAGCGAACAGATTCGAAATAA
GCATTTGTATTTTCAAAGCGTATAGTAATGTATGATATTAGTTGAGAGAG
TTTTTTACGTTTTGTTCTTTAATTTTCATATCACTTTGTATAAATATTTT
TAAAAATCAAAACGGCTAATATTTTTATTATTATTACAATTTTATTATAT
GAAGAAAGAGATAACACAACGTCATA Coding sequence (CDS) from alignment at sc0000137_pilon:325276..329151- >MSTRG.15493.3.p1 ID=MSTRG.15493.3.p1|Name=MSTRG.15493.3.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2190bp|location=Sequence derived from alignment at sc0000137_pilon:325276..329151- (Clytia hemisphaerica_ch_hm2_pilon)
GGATCAATAGACGTCAAGGAGCACATGCTAATAGAGAACGCGTCACACGC
TAGTCTGTTGGTACCTCACGTCCTCAAAAATATGGTCTCACAAGATAAGA
CCGATTCTGCTATGCAACACCAAGCCGAAGATACTGCAGACTTGAGAAGA
CGTCTGGAAAATGAATCAACTAAGAACTCTATTTTATCGAACGAAGTATG
TCAGTTGAAGAGAGAACTAGCAGAGTCGAATAAAAAACTTAATTCTTTAG
AGAAAGACATGGCAGTGGTTCGATCCACTTTTGATGTGCTGCTTCGTGAA
TTAAACAGTGTGAAAAATCAAGCGGTGTCAGAGGAGCGCATCAAAAGTGT
GGAAGAAACAACGGACAAACTAAAATTGGAGAACGCAAATGTGACAAAAA
GCGTCGTGGAGAACCACAGTCTGATCATGCGTCTCGATGAACGAATCAAT
AACGTCAACTCAAACCTGGGTGACGTCGATTTGAGACAACAAATACTAGA
GAACACTTCTGTCGGTGGTCGATTCATTTGGAAAATCGATCGACTGAGAT
CTCGCATCAAACACTCAGCAGTGGGTAAGGTCGCTGCTTTACACAGTGCA
CCGTGTTTTACTAAAAGGTTTGGGTACAAGTTTTGCACGCGTTTATATTT
GAACGGCGACGGAGTGGGTAAAGATACGCACGTTTCGCTCTTTATTGTCA
TCATGCGTTCGGAGTACGACGCTCTATTAGAATGGCCGTTTCGTCAGAAA
GTGACTTTTAATTTGTTTAACTACGCCAACCCGAACGATTCGTTAAAAGA
ATCGTTCATACCTGATGTTAGTTCGCCCAGCTTCAAACGGCCTCATAAAG
AAATGAACCTTGCAGCTGGTTGTCCGATGTTCGTAACGAAGGAACGATTG
GAAACGTTCATTTTGGATGATAGTATTTATATAGAAACTACTGTTGGAGA
TGCCTGAATGGAATTTGATGGATTATGTCCATGGAGATGCGGTCAATCAG
TCACCTTTGAAACACTCAACCACCACGTGTACCAATGCAACAAAGCTAAT
GCGCATGACCAATGCCCCTTCCAGGTGTTAGGATGCACTTATGATGGATC
AATAGACGTCAAGGAGCACATGCTAATAGAGAACGCGTCACACGCTAGTC
TGTTGGTACCTCACGTCCTCAAAAATATGGTCTCACAAGATAAGACCGAT
TCTGCTATGCAACACCAAGCCGAAGATACTGCAGACTTGAGAAGACGTCT
GGAAAATGAATCAACTAAGAACTCTATTTTATCGAACGAAGTATGTCAGT
TGAAGAGAGAACTAGCAGAGTCGAATAAAAAACTTAATTCTTTAGAGAAA
GACATGGCAGTGGTTCGATCCACTTTTGATGTGCTGCTTCGTGAATTAAA
CAGTGTGAAAAATCAAGCGGTGTCAGAGGAGCGCATCAAAAGTGTGGAAG
AAACAACGGACAAACTAAAATTGGAGAACGCAAATGTGACAAAAAGCGTC
GTGGAGAACCACAGTCTGATCATGCGTCTCGATGAACGAATCAATAACGT
CAACTCAAACCTGGGTGACGTCGATTTGAGACAACAAATACTAGAGAACA
CTTCTGTCGGTGGTCGATTCATTTGGAAAATCGATCGACTGAGATCTCGC
ATCAAACACTCAGCAGTGGGTAAGGTCGCTGCTTTACACAGTGCACCGTG
TTTTACTAAAAGGTTTGGGTACAAGTTTTGCACGCGTTTATATTTGAACG
GCGACGGAGTGGGTAAAGATACGCACGTTTCGCTCTTTATTGTCATCATG
CGTTCGGAGTACGACGCTCTATTAGAATGGCCGTTTCGTCAGAAAGTGAC
TTTTAATTTGTTTAACTACGCCAACCCGAACGATTCGTTAAAAGAATCGT
TCATACCTGATGTTAGTTCGCCCAGCTTCAAACGGCCTCATAAAGAAATG
AACCTTGCAGCTGGTTGTCCGATGTTCGTAACGAAGGAACGATTGGAAAC
GTTCATTTTGGATGATAGTATTTATATAGAAACTACTGTTGGAGATGCCT
GAATGGAATTTGATGGATTATGTCCATGGAGATGCGGTCAATCAGTCACC
TTTGAAACACTCAACCACCACGTGTACCAATGCAACAAAGCTAATGCGCA
TGACCAATGCCCCTTCCAGGTGTTAGGATGCACTTATGAT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000137_pilon | genome | sc0000137_pilon:325276..329151 - |
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