MSTRG.15421.2.p1 (mRNA) -

Overview
NameMSTRG.15421.2.p1
Unique NameMSTRG.15421.2.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000136_pilon:223403..224390+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.15421.2.p1 ID=MSTRG.15421.2.p1|Name=MSTRG.15421.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=988bp|location=Sequence derived from alignment at sc0000136_pilon:223403..224390+ (Clytia hemisphaerica_ch_hm2_pilon)
GgaaattgaatatttcataACAGTTTCGAAGATTTTCGTATAAATAGACG
TGAAAAGGTGGTGAAAATCATCATCTCAGATCTTAAGTAATCTCAGAAGA
ACAAACAAACATGAAGGTCATCATTTTCACCGCTTTCTTGGCTGGTAAGT
ACTTTGTTTAAACTTTTCTTAATAAAGCAAGTACTaaatttaaagattat
ttttaacaGATAAATCTCAAGTTTAAAAATTAAGACCTTTGATCAATAAT
CGATTGATTTCATTGACTTAAAAGGCTAATAGCTTGGTatatctaaatat
tttttacatCTAATTTCCAGTTGCCGCCGCCCTCGAGGTTGGAACCCAAA
CTGGTACCACACCACCAGCTGTCCCATGCCCAGACTCTCTCTGCAAAGGA
AGAGCTGACGGAAACTACGAATACTACTACTACAGCCGATACAACCCACA
CTACTTCCTCCAATGCTCCAACGGATTAGCTTACTGTCAAGCTTGCTGGC
CATTGTCCTTGGAATTCAGCGAACCATGCAACCAATGTTTATACAACCGA
AAAGACGAATGTGTCACCACACAACCATGGGAACCAGCAACCACCTTCGA
GTGCCCAGACAAATGCCCAGCCCGTGGACCACACTTCAGCGGAAACATTG
AAGATGACCACAACCCACACCAGTACGTTGCTTGCTTCCACGGACAAACT
GTTGGATGTATCGCTTGCCCAAAAGGATTACAATTCAACGAGAAATGGAA
CGCCTGTTTGTACCAAGGAAAATACAAGACCGAACCAGAATCCCCACCAA
AACActaaattattttcagtttttttaagtaAAAGCGAAAATCTTTCTCT
GTCtttttttCCACCCTTTTATCCTCACTTCTGACTTCTTCAACATTTTT
CCTAAACTCCTTACTTTCTTTAAATTTGTAACTTATATAAATTATCAAAC
TGTTTATATTTTACGAAATACCAGTAATACCTTCTTAA

Coding sequence (CDS) from alignment at sc0000136_pilon:223403..224390+

>MSTRG.15421.2.p1 ID=MSTRG.15421.2.p1|Name=MSTRG.15421.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1044bp|location=Sequence derived from alignment at sc0000136_pilon:223403..224390+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGGTCATCATTTTCACCGCTTTCTTGGCTGTTGCCGCCGCCCTCGA
GGTTGGAACCCAAACTGGTACCACACCACCAGCTGTCCCATGCCCAGACT
CTCTCTGCAAAGGAAGAGCTGACGGAAACTACGAATACTACTACTACAGC
CGATACAACCCACACTACTTCCTCCAATGCTCCAACGGATTAGCTTACTG
TCAAGCTTGCTGGCCATTGTCCTTGGAATTCAGCGAACCATGCAACCAAT
GTTTATACAACCGAAAAGACGAATGTGTCACCACACAACCATGGGAACCA
GCAACCACCTTCGAGTGCCCAGACAAATGCCCAGCCCGTGGACCACACTT
CAGCGGAAACATTGAAGATGACCACAACCCACACCAGTACGTTGCTTGCT
TCCACGGACAAACTGTTGGATGTATCGCTTGCCCAAAAGGATTACAATTC
AACGAGAAATGGAACGCCTGTTTGTACCAAGGAAAATACAAGACCGAACC
AGAATCCCCACCAAAACActaaATGAAGGTCATCATTTTCACCGCTTTCT
TGGCTGTTGCCGCCGCCCTCGAGGTTGGAACCCAAACTGGTACCACACCA
CCAGCTGTCCCATGCCCAGACTCTCTCTGCAAAGGAAGAGCTGACGGAAA
CTACGAATACTACTACTACAGCCGATACAACCCACACTACTTCCTCCAAT
GCTCCAACGGATTAGCTTACTGTCAAGCTTGCTGGCCATTGTCCTTGGAA
TTCAGCGAACCATGCAACCAATGTTTATACAACCGAAAAGACGAATGTGT
CACCACACAACCATGGGAACCAGCAACCACCTTCGAGTGCCCAGACAAAT
GCCCAGCCCGTGGACCACACTTCAGCGGAAACATTGAAGATGACCACAAC
CCACACCAGTACGTTGCTTGCTTCCACGGACAAACTGTTGGATGTATCGC
TTGCCCAAAAGGATTACAATTCAACGAGAAATGGAACGCCTGTTTGTACC
AAGGAAAATACAAGACCGAACCAGAATCCCCACCAAAACActaa
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.15421MSTRG.15421Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.15421.2.p1.exon1MSTRG.15421.2.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.15421.2.p1.exon2MSTRG.15421.2.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.15421.2.p1MSTRG.15421.2.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000136_pilongenomesc0000136_pilon:223403..224390 +