MSTRG.15419.1.p1 (mRNA) -

Overview
NameMSTRG.15419.1.p1
Unique NameMSTRG.15419.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000136_pilon:211850..213432-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.15419.1.p1 ID=MSTRG.15419.1.p1|Name=MSTRG.15419.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1583bp|location=Sequence derived from alignment at sc0000136_pilon:211850..213432- (Clytia hemisphaerica_ch_hm2_pilon)
GTTGATTTTAGATTGTTAATCCAACCAGCTCTTTCACTTACGGTACAATC
GCCAACTCTGCTTTCACCAGGATGTTTCGTGAAAGTTCAGATCCTGAATG
GAATCGAATGTATCATTTTATGAAGTCGTACAATTTCAAAGACACTAACC
AAGCGATTGAAGACCTCAAATCAGGGTAAAATTTCATCAACCTTGCATAT
AAAAGTCACCCTAGTATTGCAGACAAGACATGTTATACCCAATTTCGGAA
TTCTTTTTTAATATAAAAATCAATGCCCTTAAATTTCACCCCTTTAAAAA
CTAATTTAGGCGTTCAAGCAAGAATTTAAAGCAACATCCGTTAAGAACAC
ATTCCTGATACCCATTCAACCCCTTCATACATACAAGGCTTCTTTATTTT
TTCTTCACAAGCTTAATAATTTGCCATTTGACCACAGATATCTTTTATAA
AACACTTGATAGAGCTACTCTGTATTTTCCAAAACAACAGCAGTCGAAGC
AAAATAATCTGCAATCTTAGCTAAAAGTAGACCATAGTTTGGCACCGGCA
ATTTGTTCAACCAGCCAAAAAAACCTGTATGGCGCAAAGCGACGAGGCAT
GATATTAAGACTTGATCGATCAAATTGCCGGCACCGTCTGCTAGAATCTA
CTTACTAAAGGTGTCGTATTATTATGCTTCAGCTAGGGTCGGATTAGCTC
TACCTATTATTTTATATAAAATATCTCTGCATGTGACAGGGATATCTAAA
GGGCTACTTAGACTACACAATATATTGAGGACAACTTTTCAATATATTGC
CGCCGGTACTAAGCAATATATCGTCAATATATTGCCTCACAATATATTGT
GCAGTGTATGTAGCTCTTAACATGTATCCTACTTTTCTTTTCTTGTAGAC
GATTGAATGCGGTGATTCATGACTACCCTGTCCTGTTCCATTTCCTATCA
AAAGATCCTGGATGTAAGATACGTTTTGCTGGTGAACCAATTAAAGATGC
TGGATATGGTTTAGCAGTCAAGAAAGGGAACCCTTTGAGGGATCGATTAT
CAGAGTTGATAATTCATTACCAGGATACTGGAACCATAACATTCCTCAAG
AATCGTTGGATGAGCAGCAAATGTGAAGATTCGTTGAATATTCAAATGAG
TGCTCAACAAATGGGTACCACGTTTTTCGGTGGATTGTTTTTATTTGTTG
GAAGTGGGATTTGTTTATCTGTTTGTTTATTTCTGACTGAATGTATTTCA
GCTGCTGGGAAACGATCAAGGGGTAAAGATACTCTTTCAGGACCTCGAAC
CATTATTAACCACAATATCATTAACCGAACATTAACCTCTATTCCTGAAG
AGAGTTTTAAAGGGGATGAAGATGGTTTAGCACCGAGATCGCTAGCTTTG
GATCATTTTCGGAAAGCTGTCAATAAGGAGATGAAATCTCGGCAAGAAGA
TGGACATTTGGTACTGGGAAACAGCTTGGCCGAGGGAAATATAAATCATA
GTTTTATCATTGAATGAATGTTAAAAAAAATTGAAAGATTATATTTTGAA
ATATATATTTTCAAGATCAAATTTTTTTTTTAA

Coding sequence (CDS) from alignment at sc0000136_pilon:211850..213432-

>MSTRG.15419.1.p1 ID=MSTRG.15419.1.p1|Name=MSTRG.15419.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1446bp|location=Sequence derived from alignment at sc0000136_pilon:211850..213432- (Clytia hemisphaerica_ch_hm2_pilon)
ACGATTGAATGCGGTGATTCATGACTACCCTGTCCTGTTCCATTTCCTAT
CAAAAGATCCTGGATGTAAGATACGTTTTGCTGGTGAACCAATTAAAGAT
GCTGGATATGGTTTAGCAGTCAAGAAAGGGAACCCTTTGAGGGATCGATT
ATCAGAGTTGATAATTCATTACCAGGATACTGGAACCATAACATTCCTCA
AGAATCGTTGGATGAGCAGCAAATGTGAAGATTCGTTGAATATTCAAATG
AGTGCTCAACAAATGGGTACCACGTTTTTCGGTGGATTGTTTTTATTTGT
TGGAAGTGGGATTTGTTTATCTGTTTGTTTATTTCTGACTGAATGTATTT
CAGCTGCTGGGAAACGATCAAGGGGTAAAGATACTCTTTCAGGACCTCGA
ACCATTATTAACCACAATATCATTAACCGAACATTAACCTCTATTCCTGA
AGAGAGTTTTAAAGGGGATGAAGATGGTTTAGCACCGAGATCGCTAGCTT
TGGATCATTTTCGGAAAGCTGTCAATAAGGAGATGAAATCTCGGCAAGAA
GATGGACATTTGGTACTGGGAAACAGCTTGGCCGAGGGAAATATAAATCA
TAGTTTTATCATTGAATGAATGTTTCGTGAAAGTTCAGATCCTGAATGGA
ATCGAATGTATCATTTTATGAAGTCGTACAATTTCAAAGACACTAACCAA
GCGATTGAAGACCTCAAATCAGGACGATTGAATGCGGTGATTCATGACTA
CCCTGTCCTGTTCCATTTCCTATCAAAAGATCCTGGATGTAAGATACGTT
TTGCTGGTGAACCAATTAAAGATGCTGGATATGGTTTAGCAGTCAAGAAA
GGGAACCCTTTGAGGGATCGATTATCAGAGTTGATAATTCATTACCAGGA
TACTGGAACCATAACATTCCTCAAGAATCGTTGGATGAGCAGCAAATGTG
AAGATTCGTTGAATATTCAAATGAGTGCTCAACAAATGGGTACCACGTTT
TTCGGTGGATTGTTTTTATTTGTTGGAAGTGGGATTTGTTTATCTGTTTG
TTTATTTCTGACTGAATGTATTTCAGCTGCTGGGAAACGATCAAGGGGTA
AAGATACTCTTTCAGGACCTCGAACCATTATTAACCACAATATCATTAAC
CGAACATTAACCTCTATTCCTGAAGAGAGTTTTAAAGGGGATGAAGATGG
TTTAGCACCGAGATCGCTAGCTTTGGATCATTTTCGGAAAGCTGTCAATA
AGGAGATGAAATCTCGGCAAGAAGATGGACATTTGGTACTGGGAAACAGC
TTGGCCGAGGGAAATATAAATCATAGTTTTATCATTGAATGAATGTTTCG
TGAAAGTTCAGATCCTGAATGGAATCGAATGTATCATTTTATGAAGTCGT
ACAATTTCAAAGACACTAACCAAGCGATTGAAGACCTCAAATCAGG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.15419MSTRG.15419Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.15419.1.p1.exon2MSTRG.15419.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.15419.1.p1.exon1MSTRG.15419.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.15419.1.p1MSTRG.15419.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000136_pilongenomesc0000136_pilon:211850..213432 -