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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000136_pilon:47779..52694- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.15411.3.p2 ID=MSTRG.15411.3.p2|Name=MSTRG.15411.3.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4916bp|location=Sequence derived from alignment at sc0000136_pilon:47779..52694- (Clytia hemisphaerica_ch_hm2_pilon)
CTTTTTTCTAATCATGCAATTTCTTGTTTTATGCAGTGAACGGAAAATAA
CAAATAAAATTTAACAATAGATAATAAAAAACATGGTTGCAACAGAAAAA
CTGAATCTTTTTTGTGTAGACGGTAGTGATATCTGTGCGAAAGCATTTGA
ATGTAAGTAAAAACAATTTCTTTATCAATTTTTGTAAACAATAAAGAGCT
GTTATCTTTCTATCTAAAAACTAATTTAATCGGATTAACTTTCGCGACAT
TAAATTTTGCAAAATGAAAACACGTGAGATATCTGACTCGCGAAATTAAA
TCTACCACAAAACTTTTTAAATTGCATTTTCGGCTGAGAAACTAGTCCAA
AGTTTCCATTTGTGGCAAAAAATGCGCTATTTTTCAGCTGTTTTCAGGCT
TATTCGCGAAATTAAATCCAAGCGAAATCTTTCAAAAATTAAATCCAGAA
AATTTCGCGATTTTTTTCGCTTGCGAAATATTTAATCCAATTAACCTATG
AAGTATGAATTTTTCTACAATTCTCTTACGCCAGGGTATTGCTCAAATTT
GCACAGAGATGGTGATACAATTGGTTTAGTACATGTTTACCAAACTCCCG
TTGTTCCTGTTCCACTAGGAGGTATGCTTCATTTCGTATTTGCTAATATC
GGATAAGTTTTCATGTCACTTTCAACAAACTAAAAAGCGATTTTTTTGCT
TCTTTGTTTTCATTTGCCATGCAATCTTTTTTCCAAAATCTTTTCCCTTT
AGCAGGTGACAATATGATATATGATGCTGGACTTTATGATCAATTACTTC
AAGATGCATTCAAAACAAGCCAACATATTCTGGCTAAATACAAAAGCAAA
TGCACTGATTTGAATGTAAGATAGTTTGAAAGCTCCATTTAGTTGATTTA
TTTTCTCAAAAATTTGCTGTTTCAATTTACGTTGGTTGTTCATGATATGT
ACCACTGGAGATTCTTCTGATAATTTGGCATTAGTGTCAGTCTCTATCAT
TCAACAAGAAAACTGATAAATACACCGTTTCGACCGTAGTCGCGCGGTCA
GGCGCGTGCCAATTTAATATCTAATTATCCGCCTAAACTCGATCCAATCC
TTTTTTTACACCTTTTTCTATTGTCTATGAAAAAGGACGGTTATATATTA
TTACGGTTATATATTAAACGGTTTTAGTGGGATAAAGCGGAAAAAGAAAT
GCCCGTGCGGCAATTGGCGGCTACGATCGAAAAGGTGTATTGTTATTATT
GTAACTGCAATTTTTTTCAATACAGCAAATAATAAATCATAAAACCTCAA
TCTTTTTTCAGATAAAACATGAAGAGTTTTTCCAGCACATGAACGACTCA
GTTGGTCATACTATTTGTAGTATTGCACATGAAAAAGATGCCAAAAATAT
TATTATGGGTCAAAGAGGGTTAGGTGTTGTGCGCAGAACACTTCTTGGAA
GCACAAGTGATTATGTTGTGCATCATTCACATCTACCAACAATCATTATA
CCGCATAAGGAATGAAGATTGCATTTTTTATTTATTTATAAATTTATTAT
CAATACACTTATTAATGATATTTTAATGTACATTAGAATGAATTTTTTTA
GGAATCCAGGATAGTAATCATTTTAACAGAGGCCAAGGTCTATAAAAGTC
GCCTTATTTAGTATTTTCTGGTCATAATTTGGCTATTTGTATCATTTGTT
CTGGTCCTGTTAACGAATACATCTTTTAATTAGGTTCACTGACACTCATT
TTTTTCTTTCTTTTAGTGAAAACAAAGAAAATAAATTAGAAATTTTAAAG
AAAGCAATACAAAATAAACGATAATAATAATACAATATGGCAACAACAAC
CGAAGATGGATCAGTCACTTTTGAATCACAAACATTGAATTTGGTTTGCA
TCGATTCTAGTAAACACAGCAAACGTGCTCTTGAATGTAAGCTACTTGTT
TGATCCTTTTTTCGACCTACCTTGGAGACCCTTTAATCTAACCAATGTTC
GTTCGTTCGTTCGTTTGTCCGTTCGTTTGATCCTTTTTTGGGCCTACGTT
GGAGACCCTTTAATTTTAACCACGTTCGTTCGTTCGTTCGTTCGTTTGAT
CCTTTTTTGGACCTACCTTGGAGACCCTTTAACTTAACCAATGTTCGTTC
GTTCGTTCGTTTGTTCGTTCGTTTGATCCTTTTTTGGGCCTACCTTGGAG
ACCCTTTAATTTTAACCACGTTCGTTTGTTCGTTCGTTCGTTCGTTTGAT
CCTTTTTTGGACCTACCTTGGAGACCCTTTAATTTAAGCCACGTTCGTTT
GTTCGTTCATTACCAGGTTTTCTTGGGATTGGCTTTTATGCATAAAGATG
GAGGGCAAGGTTCTCTAAAAAGTGGCTAACGCAGTTTTTTTCGGAAAATT
TTTATTGGCCGCAAAAATCGGATTTTCATTCGGGAAAATTCCCTTACGTC
ATTTTAGGGAAAAATAGCATTTCTCGCGATTGGTTTCATATTTTTTCATA
TAGAAGGCAAGGTTCTCTAAAAAGTGGCTCAAGCAGTTTTTTCAAAAGTT
TATTTTGGCTGTAAAAATCGGATTTTCTTTTGGGGAAATTCCCTTTTGTC
ATATTTAGGGAAAATAAGCATTACTCGAGATTATTTTGTATTTTTTGCAT
TGTGATATAAAATGGTAATATTTCATTTCTGATGGAGCCCGATTTTCAAA
AAAATAATTTCTTAGGCGAACTTGTGCTAAAAAGTGCCTAACATTATTAT
AAAAAGGAATTTTCTTTCTGTAAACAATCCCCCTATATTGTTGAAATATG
GCAAATCGAGCTGACAATATATTGCGGACACCTTTTCAATATATTGCCGA
CATTCATCAATATATTCTCAATATACTGACCGACAATATATTGTTGCAGC
CCTTAAAACAAAAACTTTAATTTTCAGGGTATTTTGACAATCAGCATCGT
GATGGTGACCAGGTTGGTTTGGTTCATGTTTTTGTGCCTCCTGATCTCCC
AGCTTTCGGTATTTATGGTATGAAATTTCATTTCCTTAATTATATACAAT
CCACTCTCCCTAATTCGAACTTCTACGATTCAAATTGTTCTTTAATTCGA
ATTAAGGCATTGTTTCCCTTCGGCTTGAAAGTATTGTAAAATGCTTTCTA
TAATTTGATGCAAAGTTTTAATTCCTTGAAGATCGAATCAGAGAGAGGCA
ATTATAGGTACATACAAAAATCAACACATAGGCGTAGCGAGATACCCTGC
AAAATTTATGAGGGAGTGCAGACGTTTATGACATATTCATGATTTTTTTG
ATAAAACAAAGACAATAATTACAGTGTCGTAAAAACCGCTCTCATCCATA
AATTTTGCAGGGTATCTCGCTACGCCTATGATACAGTCCTAGTTGTATAA
ATTGAAAAGAGACAATTCATATGAAACATTCTCCATACTGTGCCAGTAAC
GTAGCCAAGGGGGCGCAAAATTTTTGACACGGTAATTATCTTTTTATATT
ATGAATAGATAATTACAGAGTCATAAAAATCTGCTCTCCTGCACAAATTT
TGCGCCCCTCCTGTCTACGCTACTGTGTGCAATATATTGACGAACAATAT
TCGACAATAACGTTTAAGCAACAGGTGGTCTATTGTAAAAAAGAATCTTC
TATCTGTAAACGATCCCCTAATATTGTTCGAATATTGTAAATCAAGCTAG
TAATATATCGCGGACATCTTTTTCAATATATTGTGAGCACTTTACAACAC
ACCCATGTCTCACAGCCCCCGGTGGAACCTTTTCCCACAGGGGATAAAAG
TTTCTAATGATATCCCAATAGGGGTGAAAATTCTATTGTTCCAAGGTTAA
AAAACCCAGTGGCGGGATGGTTTTGGAGTGCAATTTTTAAACATTGATAT
CCGAATGGGGATGAAATCAAAGTGAATTTCCCAGTGGGGATGAAATTCCA
GGGTATTTTTCCCGCCGGGGACGAAATCTTTGCCAAATTTTCTAGTGGGG
GGGTCTCTGACACAGGGGTGTCTTATTTTACTCAGTAAGTGAACCAGCAC
TGAGCATTTGTTTATTTTTCAGCAGGTGGAATGGCTCCTATAAACATGTA
CCAAGAAACATTGCAGGCGGGTATCGAGGACAGTAAAAAGATTGTCGAAG
AATACAAAGCATACTGTTTATCTAAAGGGGTATTTATATTATTAAAGTTT
GATTTTTAATTTATACAGATACCAAATTTTATGTTTTGCGTTATAACCAA
AAGATAAGTTCAGTGAAAATTAGTTAAAACCGTTATAACTAGCAAGTATG
GAATTCGAGAGATTTTCCAAATTTGAAAATTAATCTACTCGCATCGCTAT
CATAGATTCTGAGACTCGAAAATTTCTTATTCATTCCGGTTCGTAGTATT
CTGAAATTTGCGATTTTTCTTTTTAGGTATCACCAAAATATTTCGTTCAG
TCTTTAAATGATTCAATTGGACATACAATTTGTGATATTGCAAAACAAAA
CAAAGCCAAGATGATGGTGCTCGGTCAAAGAGGCCTGGGTGCTATTCGTA
GAACATTTTTAGGAAGTGTGAGTGACTACGTCATACATCATGCACATATT
CCTGTTTTGATCGTACCTCCAAAATAGTTGTTAAAATTTTTATGAATCAC
AACCCCAGCCGAATATTCTTTGAAAAGCTTGTTGTGTGGAGGTGTCTTTT
TGGAGATAGTGTCAGCAGCTCGTCACTTCTTGTCATTCATTCATCCTTAG
TCAGTAGATATATTATTTCAAACATATACGACAACCATTAAGTAATTTTG
AGTTATATATAATTTTTTTTATTATTATTACAATATTTTTGTAGTAATAA
CTTGTACTGTAATTTTTATGTAAATGAAATAGAAAATTTTTCTCTTCGTC
TTGGAATTATTGCCTG Coding sequence (CDS) from alignment at sc0000136_pilon:47779..52694- >MSTRG.15411.3.p2 ID=MSTRG.15411.3.p2|Name=MSTRG.15411.3.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1896bp|location=Sequence derived from alignment at sc0000136_pilon:47779..52694- (Clytia hemisphaerica_ch_hm2_pilon)
ATAAAACATGAAGAGTTTTTCCAGCACATGAACGACTCAGTTGGTCATAC
TATTTGTAGTATTGCACATGAAAAAGATGCCAAAAATATTATTATGGGTC
AAAGAGGGTTAGGTGTTGTGCGCAGAACACTTCTTGGAAGCACAAGTGAT
TATGTTGTGCATCATTCACATCTACCAACAATCATTATACCGCATAAGGA
ATGACAGGTGACAATATGATATATGATGCTGGACTTTATGATCAATTACT
TCAAGATGCATTCAAAACAAGCCAACATATTCTGGCTAAATACAAAAGCA
AATGCACTGATTTGAATGGTATTGCTCAAATTTGCACAGAGATGGTGATA
CAATTGGTTTAGTACATGTTTACCAAACTCCCGTTGTTCCTGTTCCACTA
GGAGATGGTTGCAACAGAAAAACTGAATCTTTTTTGTGTAGACGGTAGTG
ATATCTGTGCGAAAGCATTTGAATATAAAACATGAAGAGTTTTTCCAGCA
CATGAACGACTCAGTTGGTCATACTATTTGTAGTATTGCACATGAAAAAG
ATGCCAAAAATATTATTATGGGTCAAAGAGGGTTAGGTGTTGTGCGCAGA
ACACTTCTTGGAAGCACAAGTGATTATGTTGTGCATCATTCACATCTACC
AACAATCATTATACCGCATAAGGAATGACAGGTGACAATATGATATATGA
TGCTGGACTTTATGATCAATTACTTCAAGATGCATTCAAAACAAGCCAAC
ATATTCTGGCTAAATACAAAAGCAAATGCACTGATTTGAATGGTATTGCT
CAAATTTGCACAGAGATGGTGATACAATTGGTTTAGTACATGTTTACCAA
ACTCCCGTTGTTCCTGTTCCACTAGGAGATGGTTGCAACAGAAAAACTGA
ATCTTTTTTGTGTAGACGGTAGTGATATCTGTGCGAAAGCATTTGAATAT
AAAACATGAAGAGTTTTTCCAGCACATGAACGACTCAGTTGGTCATACTA
TTTGTAGTATTGCACATGAAAAAGATGCCAAAAATATTATTATGGGTCAA
AGAGGGTTAGGTGTTGTGCGCAGAACACTTCTTGGAAGCACAAGTGATTA
TGTTGTGCATCATTCACATCTACCAACAATCATTATACCGCATAAGGAAT
GACAGGTGACAATATGATATATGATGCTGGACTTTATGATCAATTACTTC
AAGATGCATTCAAAACAAGCCAACATATTCTGGCTAAATACAAAAGCAAA
TGCACTGATTTGAATGGTATTGCTCAAATTTGCACAGAGATGGTGATACA
ATTGGTTTAGTACATGTTTACCAAACTCCCGTTGTTCCTGTTCCACTAGG
AGATGGTTGCAACAGAAAAACTGAATCTTTTTTGTGTAGACGGTAGTGAT
ATCTGTGCGAAAGCATTTGAATATAAAACATGAAGAGTTTTTCCAGCACA
TGAACGACTCAGTTGGTCATACTATTTGTAGTATTGCACATGAAAAAGAT
GCCAAAAATATTATTATGGGTCAAAGAGGGTTAGGTGTTGTGCGCAGAAC
ACTTCTTGGAAGCACAAGTGATTATGTTGTGCATCATTCACATCTACCAA
CAATCATTATACCGCATAAGGAATGACAGGTGACAATATGATATATGATG
CTGGACTTTATGATCAATTACTTCAAGATGCATTCAAAACAAGCCAACAT
ATTCTGGCTAAATACAAAAGCAAATGCACTGATTTGAATGGTATTGCTCA
AATTTGCACAGAGATGGTGATACAATTGGTTTAGTACATGTTTACCAAAC
TCCCGTTGTTCCTGTTCCACTAGGAGATGGTTGCAACAGAAAAACTGAAT
CTTTTTTGTGTAGACGGTAGTGATATCTGTGCGAAAGCATTTGAAT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000136_pilon | genome | sc0000136_pilon:47779..52694 - |
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