|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000135_pilon:892412..898101- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.15405.2.p1 ID=MSTRG.15405.2.p1|Name=MSTRG.15405.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5690bp|location=Sequence derived from alignment at sc0000135_pilon:892412..898101- (Clytia hemisphaerica_ch_hm2_pilon)
ACTTCTAATGATAATTAAAATTCAAATTTTATTTTAGAAATTGACTTTTT
CTCTAGAATGGTTTGAAAGAAATGCAGTTTTGACCCGCCCAGGGGACCCC
AGAGGGGTCTAAATATGGAGTTGCGATCCAGGCGGATAACTTAGCAACAG
AAATAACATTGGCGATTTGGCAGTTTGTATCTAAAAGAGGAAGATCTTGA
CATGTGGAACAACCAAAACACTTGTTTCCTATGGAATTATTGGTTGTATT
GGGGACGAGAGGATGGTCTTTTCATGCTGATCACCAACACTTATCAAAGT
TGCGCCATCCATCAACAAATGTACACTTCATGGATTTTTATGCAGCATCA
CAATCTATCTTACGAGAAAAATCTTAAACGATAACCATCTATTTGAACTG
CAAACCATTCAATTTAAGCCGGTCAGTTTTCCATCTATTGAGACTGCAAA
CTGTTCAGTTCAAAACCGTTCAGTTTTCACTCTATTTGGACTGCAAACCA
TCCAGTTCAAAACAGTCAGTTTTCATCTAATTGGACTGCAAACCACTCAG
TTCAAACCATTCAGTTTTCATCTAATTGGACTTCAAACCATCCAGTTCAA
AACTGTTCAGTTTTCCTTCTGTTCGGACTGTGAACCATCTAGTTCAAACC
GGTCATTTTCCATCTATTTTTACTGCAAACCATCTAGTTCAATCCAGTCA
GTTTTTCATCTGTTTGGACTTCAAACCATCTAGTTCAAACCGGTCAGTTT
TTCATCTGTTGAGACTGCAAACTGTTCAGTTCAAAACCGTTCAGTTTTCA
CTCTATTTGGACTGCAAACCATTCAGTTCAAAGCGGTCAGGTTCTTTCTG
TTTGGACTGCAAACCATCTAGTTCAAACTGGTCAGGTTTTCATCTATTTG
GACTGCAAACCATCCAGTTCAAACCTGTTCATTTGTCCGTCTATTTTGAC
TGCAATCCCCTCAGTTCAAAAACCAGTCACTTTTCCATCCTTCTGGACTG
CCAACATCCAGTTCAAACCGGTCAGTTCTCCATCTATTTGAACTGCAAAC
CCCTCAGTTCAATAACTAGTCAATTTTCCATCCTTCTGGACTGCAAACAT
CCAGTTCAAACCGGTCAGTTCTCCATCTATTTGAACTGCAAACCCCTCAG
TTCAATAACTAGTCAATTTTCCATCCTTCTGGACTGCAAACCATCCAGTT
CAAAACCGGTCAGTTCTCCATCTATTTGGACTGAAAACCAACCAGCTCAA
AAACCGGTCACTTTTCCATCCTTCTGGACTGCAAACCTTTCAGTTCAAGC
CGGTCAGTTTTCTATCTGTTCGGACTGAAAACCAAACAGTTCGAACTGGT
CCGTTTTCCAACTATCTGACTGCACATTTTGTATATTCCAAGTATGTCAA
CACTATTGTTTGTAATCGATTCCAATTGATCTCGGCATTTTCCATAAGAC
GGGTCTATAGCCAGACCGTGTCAAAGGCTGCTTTGAAATGCATAAGTGGA
ATCTTAGTGGGATTGTTTTTCTTTTAGAGCAAAGAATTTAACTCTAAGAG
AAATTTAAAACAGAGATGAACAAAGAGAAAGTGAGTTAAAGGTATGGTAC
GTTAAATATAAAAGGATTGAGTATAGTCATCACCTTCACCTCAAAGACAA
ATCAATAACGAAAATAAAGAAAGAAGATGTCTTTCACCAAGAACATGTTT
TATGTACCCTTTGATTTTGAAAGAGATCATGCAGGATCTGGTCTAGATAT
CACCAACTTCATCTCAATGATCAAGATAAGAATCAAGAAATGAAACCAAA
ACATTTCCTACACTTTGTTGACTGTTGTAGTAATGGAAGAGGTATGTATT
TTCATTTGTTTCTCTGATAGGTATTAATTAAACTTTTTGATCGAACTTGC
TAAGAATTTCTTCATGTTCAATTCATAGAAAAGTCTAGACTTTAAAAGTG
TTAGTTTCCAAAGCTTTTACATTGAAGCTTTTTTATTATGATTTTTTGGG
ATATTTGAATTTGCTGTTCAATGACATTGAGGCGAACAATAATCAGGGTA
GTATAATGACTAGACTTTGTTTTATCTTTGCCGAAGACTTTTTGAAATGC
ATTTATGAATTTTGTAGAGCGTTCTGCACGTTGAAAGTCGAGTTCGAAAC
AACAATGGAGCTACCTTTCCACGTTTGACGTCACAATCAATGATGAATGG
AATTTACAGAGAGTTCAACGGAAACAAAGGTATGATTATTTTGGCTAATC
AACTGTGGGATTAGATTTTTTGTCAACTACAATCGGCGCCGAAAAAATTG
GCATAAAAGGGGAATTACCTTAAAACTTTAAAACTGCAAGTGATTTTTAA
GTGCTTTAATGTACGGTTAGAAAGTAGAGTTTTAACCCTGAGTCTCAACA
CTATTTATAGAAGCTTAGAATCTCACACATCTCAGGGTCTAAAAGCTCAA
GAATGTTCCAATACGGCTGAAAACATAGCATAGAAGCCACTTAACCACTC
CACTGGAACAAAGTGGAAGTACTGAAATTACAATTCTCGCCCGAGCTTTA
AATTCTAGAAAACGTTAAAATACCCAAAATTGCCAATATATTTCGGCGCT
AATTGTAGCAAAGAAAATGGTTTGTAGAGTATACACAAAGATCACCGAAC
TCGATTTTAGATAGAAGATAATGTATTCATTTTTAGCTGTATTATTTTTC
GATTATTGATTGTTTCGGCGATTTCACCATCAACCAAATTGTAGTTTGAC
CTTCTACCAAATGGTGAAGTTTAATCGTGTATGAAATCTATTCAATATTA
TAAATCACAATTTTCAGGATTTGGTTTTTGTGGCTTGATGAACATTCAAT
GTGGAAAAGTGAAAGCAATTGGTCAATGGACCAATAAGTAAGACCATATT
TATTTTGGAAGACACTTTATTGAACTTTGATTGATATTATTTGCTTATTG
GACCTACCTAGAGATCCTATAAATTAACCTGTGTTCGTTCGTTTGTCTAT
TCCTTCGTTCGTCTGTTACCAAATTTTTTCGGGATTGAATCATAGGAATT
TTGTGATTTTTCTGAACAAAACCAGGCTTCTTCATAATCCCTCTTTTTTG
TTTCGAGCGTAACACTCTTACTCTTTGGGATTTAGAGAGTTTCAAACCTA
TTAAACCATTAAGCCAATCATCTGTGTTTTAAACATTCTTTTATTTGACC
CAATGCTGAAGTTAAATCTTAAATGAAATCTATATAAATGACAATTTTCA
GGATTTGGTTTTTGTGGCTTGATGAACATTCAACGTGGAAAAGGAAACAG
TTGGTCAAGGCTCTACACTTAAGAAAACTTCTTGGATGGGTAAGACTTCA
TTCATCATTATTTTTTATTAAAACTAGGCTACGTCATATTTCCCTTTGTT
TCGAACGTAAAACTCTTACATACTCTTCAAAACTAAGGTCTAAAAAACTA
GGAGCTGTGTATTGTGTAGACTAGAAAAAAAACTAAAACGCTGAAAAATA
TCACCATAACCAGGCTTAAGAAACAACATCGAACAAAATGGATAAACTTA
ATACCTAGTAAAATGTTCTCATTCCATGCAAAGAGTAATAGTAGTTGCAA
AACTTTTTAATCAAACCCATGTAACTTACTCTTAGATTTGACAGACGTGA
TGATTGGTACTCTAAGGTCCCGAATAGACGTCCCCCCCCGCTTATTAATT
TTCGAAAAATTTCGGACCCCCCCCCCCCGTTCTTATTAGGACCCCCCCCC
CCCCGTTTATTAATTTTCTAGTTTTTTGTTTTTGAGTTGAAGTGTAAATC
AGGCTTAACGTTCGAATTTTGGTAAAAGGTAAAGGAAACTTCTAGATATT
TTCAGACCCCCCCCCCGTTTATTCAGACCCCCCCGTTTATTATATTTTGC
AACTTTGAAACAGAAGCTTTCATCTCCTCAGTGGGAAAAAGTTCCACCGG
GGCTTTGATGTAGTTGTGTATGTTTCAATTCCGATACATGGTAATAAAAA
ATGCCTATCAGATATTGTTTAAGGTTTTTCATTCCTGTTGATTCATATAA
TTTGACATCTTTTTATAAGAAACTCAATTTTAGCTTCCGTCCTGCTTTTG
CTTAGCTTTCTAGCTCTATGTTTGAAAAATGTGGTGCGATCACCCCTGAT
ATTATACCATATTTATGCTTATTGGGTTAAGAGCTGTTGTTTGCCATGGT
TAGATCTAAAAAATGTTATTACGAGATGATAAAAAAATGTGGCTAATTTC
AGAGCTCAAGCCTAAGCAGTCTATAAGAAAAAGAAGTGTGTTCTTTCCTG
TCTTTTTCCCTTTTCAATAGAATGGAAAACACAATGTATTGGACAGTTTC
GGACACATTTAGCAATCAAACTCTACCATTTTGTCTGTGATGATACCAAA
AATAATTTTAGTGTCTTTATTCAGCTTTACTAAAACTGTATAATTGTTGT
CTTATACTAGGTTTCCATCAATTATGCTGACTGCATGGTTCGCACAGCAA
ACGGATTCAAATTAACTTCTATCAGCAACAGACCAGTCATAAAAGACCTA
TTAATTGCACCACTTGGGAACTCACCTTTCTGTGCGAAAAGGTAAGGCAA
TACTTACATGATTTCACTTTTTATCCGTGATATTCGAGATGTAATGTTTT
ATACCGAAGCACATATCGGATGTTTGCAACTACTTTTGAACTCGAAAAGT
AAAACTAGTTGCAAACATCTGGGCTAGTTTTGAGTGTTTCCGTATAAAAC
ATTACGTCATGAATATAATAACTGTTGAGTAACGAGACTTAATGAAACTG
ACGTTATAAATAGAAACGAGCATTCATACTAATCGTTGTCTAGTGAGGGA
TTTTCATTTTAGTTGAGAAAAGAAGGTAAAATAATTGTCAACAAAACCCA
TATCTTTACTCCGAAAATTTTATCGGTACACTGAGGATTCATGATATGCA
CCGTTGCAATGTCTTCGACGGACTCAACAACTGATTGGTCGCAAGTGACG
TATTGATCGATTTTACGTCACAACCAATCAGCTGTCGAGTCTGTGATGTA
ATGTCAAAAGACATTACAACGGCGCATATCATCAAATGTAATTGTTAACA
AATCTTGATTATGATGAAGTATTTCTCTCATTTTCAGGTCGCTTGATCTT
GACATCAACAAAAACAACATATAAATTATGAATTTGGATTATGTCACGCA
AAGTTCATCACGAATTGAATGAACAGGCAAGCGAAATACATCAGATATGA
GGCACATGTACTTCGATGTAATTCTAGTTTCACTGGTTTTTGCCAATGAA
CATACGAACGATATTAACTAAATGGATTGGAAAGAAACCTCACACTAAGT
TAATCAAAAGATACTTATTATACGAACTTCTGTCTGGAACTCATCCACTG
AGTAAGATTGGACTTTCTGTTATGTTGTTTTGGCGACTATGATTTTGTTT
TTCAAAGTATGTAGTTCTTTCATCAAATTAAGTTCAAAAAATGGATCACA
GTACCTTTGTTTTTTCTTACAAACTAGCACGTTTTTTTATAAGAACACTC
AAAAAATTTGAAGGATGTTCTTAACTTAAATTTTAAGCTTAAAAATATTT
TTAACCTGTTTTTTTTTTTCACCATCTTATTTTTTTTGCGCAAGCTTCCT
AAGAAATTTGGGTGTCAATAAAGCCTTAAAATGTTCTTAC Coding sequence (CDS) from alignment at sc0000135_pilon:892412..898101- >MSTRG.15405.2.p1 ID=MSTRG.15405.2.p1|Name=MSTRG.15405.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2682bp|location=Sequence derived from alignment at sc0000135_pilon:892412..898101- (Clytia hemisphaerica_ch_hm2_pilon)
GTCGCTTGATCTTGACATCAACAAAAACAACATATAAGTTTCCATCAATT
ATGCTGACTGCATGGTTCGCACAGCAAACGGATTCAAATTAACTTCTATC
AGCAACAGACCAGTCATAAAAGACCTATTAATTGCACCACTTGGGAACTC
ACCTTTCTGTGCGAAAAGGATTTGGTTTTTGTGGCTTGATGAACATTCAA
CGTGGAAAAGGAAACAGTTGGTCAAGGCTCTACACTTAAGAAAACTTCTT
GGATGGGATTTGGTTTTTGTGGCTTGATGAACATTCAATGTGGAAAAGTG
AAAGCAATTGGTCAATGGACCAATAAAGCGTTCTGCACGTTGAAAGTCGA
GTTCGAAACAACAATGGAGCTACCTTTCCACGTTTGACGTCACAATCAAT
GATGAATGGAATTTACAGAGAGTTCAACGGAAACAAAGATGGAAGAGGTC
GCTTGATCTTGACATCAACAAAAACAACATATAAGTTTCCATCAATTATG
CTGACTGCATGGTTCGCACAGCAAACGGATTCAAATTAACTTCTATCAGC
AACAGACCAGTCATAAAAGACCTATTAATTGCACCACTTGGGAACTCACC
TTTCTGTGCGAAAAGGATTTGGTTTTTGTGGCTTGATGAACATTCAACGT
GGAAAAGGAAACAGTTGGTCAAGGCTCTACACTTAAGAAAACTTCTTGGA
TGGGATTTGGTTTTTGTGGCTTGATGAACATTCAATGTGGAAAAGTGAAA
GCAATTGGTCAATGGACCAATAAAGCGTTCTGCACGTTGAAAGTCGAGTT
CGAAACAACAATGGAGCTACCTTTCCACGTTTGACGTCACAATCAATGAT
GAATGGAATTTACAGAGAGTTCAACGGAAACAAAGATGGAAGAGGTCGCT
TGATCTTGACATCAACAAAAACAACATATAAGTTTCCATCAATTATGCTG
ACTGCATGGTTCGCACAGCAAACGGATTCAAATTAACTTCTATCAGCAAC
AGACCAGTCATAAAAGACCTATTAATTGCACCACTTGGGAACTCACCTTT
CTGTGCGAAAAGGATTTGGTTTTTGTGGCTTGATGAACATTCAACGTGGA
AAAGGAAACAGTTGGTCAAGGCTCTACACTTAAGAAAACTTCTTGGATGG
GATTTGGTTTTTGTGGCTTGATGAACATTCAATGTGGAAAAGTGAAAGCA
ATTGGTCAATGGACCAATAAAGCGTTCTGCACGTTGAAAGTCGAGTTCGA
AACAACAATGGAGCTACCTTTCCACGTTTGACGTCACAATCAATGATGAA
TGGAATTTACAGAGAGTTCAACGGAAACAAAGATGGAAGAGGTCGCTTGA
TCTTGACATCAACAAAAACAACATATAAGTTTCCATCAATTATGCTGACT
GCATGGTTCGCACAGCAAACGGATTCAAATTAACTTCTATCAGCAACAGA
CCAGTCATAAAAGACCTATTAATTGCACCACTTGGGAACTCACCTTTCTG
TGCGAAAAGGATTTGGTTTTTGTGGCTTGATGAACATTCAACGTGGAAAA
GGAAACAGTTGGTCAAGGCTCTACACTTAAGAAAACTTCTTGGATGGGAT
TTGGTTTTTGTGGCTTGATGAACATTCAATGTGGAAAAGTGAAAGCAATT
GGTCAATGGACCAATAAAGCGTTCTGCACGTTGAAAGTCGAGTTCGAAAC
AACAATGGAGCTACCTTTCCACGTTTGACGTCACAATCAATGATGAATGG
AATTTACAGAGAGTTCAACGGAAACAAAGATGGAAGAGGTCGCTTGATCT
TGACATCAACAAAAACAACATATAAGTTTCCATCAATTATGCTGACTGCA
TGGTTCGCACAGCAAACGGATTCAAATTAACTTCTATCAGCAACAGACCA
GTCATAAAAGACCTATTAATTGCACCACTTGGGAACTCACCTTTCTGTGC
GAAAAGGATTTGGTTTTTGTGGCTTGATGAACATTCAACGTGGAAAAGGA
AACAGTTGGTCAAGGCTCTACACTTAAGAAAACTTCTTGGATGGGATTTG
GTTTTTGTGGCTTGATGAACATTCAATGTGGAAAAGTGAAAGCAATTGGT
CAATGGACCAATAAAGCGTTCTGCACGTTGAAAGTCGAGTTCGAAACAAC
AATGGAGCTACCTTTCCACGTTTGACGTCACAATCAATGATGAATGGAAT
TTACAGAGAGTTCAACGGAAACAAAGATGGAAGAGGTCGCTTGATCTTGA
CATCAACAAAAACAACATATAAGTTTCCATCAATTATGCTGACTGCATGG
TTCGCACAGCAAACGGATTCAAATTAACTTCTATCAGCAACAGACCAGTC
ATAAAAGACCTATTAATTGCACCACTTGGGAACTCACCTTTCTGTGCGAA
AAGGATTTGGTTTTTGTGGCTTGATGAACATTCAACGTGGAAAAGGAAAC
AGTTGGTCAAGGCTCTACACTTAAGAAAACTTCTTGGATGGGATTTGGTT
TTTGTGGCTTGATGAACATTCAATGTGGAAAAGTGAAAGCAATTGGTCAA
TGGACCAATAAAGCGTTCTGCACGTTGAAAGTCGAGTTCGAAACAACAAT
GGAGCTACCTTTCCACGTTTGACGTCACAATCAATGATGAATGGAATTTA
CAGAGAGTTCAACGGAAACAAAGATGGAAGAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000135_pilon | genome | sc0000135_pilon:892412..898101 - |
|
