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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000135_pilon:746215..753485- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.15397.1.p1 ID=MSTRG.15397.1.p1|Name=MSTRG.15397.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7271bp|location=Sequence derived from alignment at sc0000135_pilon:746215..753485- (Clytia hemisphaerica_ch_hm2_pilon)
CAGCGGGTGACTTTAATACAAAAATCTTTTAGCATCAACTTATACGTAGG
GGATTCTTAAAAAAAATTCAGAGTCTGTCATTTTAAGCATTCGACTCGCT
CGGAACAAGACGGAATTAAATAATTTGAAGTATATCATAAACATTTCAAT
TGTTTATTTACATTTTTGATTATTAAAAAAAGGGGATTTTGAAGATTTAC
AATCATCATCATTTAGTATAAAACTCTTTTAATGATCAAGAAATTTGTTA
ATTGCATTTTATGATAATTATCATCAACAGCTAACGAGAATTCATCAGAC
ATTTTTGAAGTACTATTCAGACTGACTGGAGATTTGAATATCGGACAAAA
CTTTGAATTATAACCGGACAGTTGATTTCGTTTTGGACAACGTTGACCTT
ACTTTCAGGTAAGTGGAACATTAATATTTTGAGAATTCAAAACTGATTTT
ATCGATAATGATTAATTTTGAACTACAGTTGACGCTCTCTAAGTAGATTT
TCACGCGCGATAGGATTTTCAACTTCGTTAACTGTGTAATATCAGCTTTT
TGATGCTTACTGGTAGCGCTAGATAATATTTCTCTGGCGTCCATAGGTAA
CATGGGTAAAGCCTGGGATACACGGGGACGGGGTTGTTGGATTTTCATTG
AATAAGGGAGCATATCAAATAGTTGAGCATCGTTTATTAGAGTTTTTTGT
TGACGGCAGCTTCCATCATTATCGAATAATGAAGTGTATGGACAAGTCAA
ACGTGAACTCTGTTGTAGGCAGTGACGATAAAGTGATAGTAACTAGACTA
AGAGGAAAAGGTTAACTTTTATCTTGATCATGGAAAGTTACCTTGTATGA
GCGAGAATACGAAATTTCGTTTAACATATTACCAGGGCTAAAGTAGAACC
CGGTCTAGTCACGGCTAGGACCAATTGGCGTATAGTTGTCTCGATTGTGT
CACCCATTTCTTTCTAATTGGCTAACAAGGAAATTACACAATTTCTAATT
AGGTATCGAGGAAAATAAACTCCTCTCCACGCAAAATTCAGCAAATAGTA
GTGTTCTGTCTTTTCGATTCAAAGGCTTCCCACGATGACCATGAGATATT
GGGTGTATTATAACCACTGATCTTAATAAACTCTGGACTGAGATATAACC
ACCATCTTTGATCGGAGTTTTTTATTAAAGTGGTGAACCCGCAAAGAAGC
CGTCGCAGTTTTAAAAATTAATGTCAATCGGCGCTACACTATCGCTATCA
AGTATTCAAGGCAATATTGACCTAGCGCTCGAAAATGTTGAAATATCTTC
TAGAAAGAGTAAAAAAGTGTGCCTAATGTAGAATGAAACCTAAAAATTAC
AAGATTAAGAAGCAACCTACGTAAAATAGTTTCAACCAACTTCCGAAGAA
AATATTAATTTTTTAATGCGTTGCACTGTAGTGTATATTACATAATTTTC
TTGGTAGATACCCACAATTTTTCATGATTAGTAACCAACATTAGTTACAA
AGAGAAAACTTTAACTGTGAGGACGAGGGTGAAGTTTTTTGACCATTTTT
GTTCAGAGAAACAAAACATTTACAAAAATCAGGAGCCGATCCTACTTTAA
AATCTGAAAAATCTAAATCACACACCAAATAATTTTCGTTTTGTTTAAAT
TCACTTTTTAATGAAATATACAAACAAAATTGAATTATACATTTAAGAAA
ATAAATTCGCGATAGTTGATGATTTTTAAAAGATTTGAAATTAAAGCGAT
TTTTTAACTGGATTTTTAACTTTAGTTTTCTGTTTAAAATTTTGATAGTT
AGGTTCAGTAGTGATTCTAAACTTCTAAATCGGAATTACATGAATAAAAT
TCTGCTAATCTCAAATGATGAGCAAATCATCTCTGTCTCTTAGTACCAAG
AAATTTCAGGAGTTTCGAAATCGATGGAAGTCTCTAAAGGTTAAATTAAG
ATGGCGTTCCTCAAGAAATTTTTTTTTGACAGTTTCCTTTCGCCTTTCCA
TCAGTAGAAAATTAATGACTTTATGAAATTTGTCTCTCTCGTGGGAAATT
TTACCATCAGTTTTCAACGAAAAATGTTTTTTCACTCATTTTTTTTTTTT
TTGAGTTTCAAAATTTTTATGAAATATGGTTAAGTCATTACACCTAGCAC
ACCAGGCGCCTTGAGAATGTTCTAATTCATTTTCATTCTGTTCTTCAATC
TTTGAAAGAGGAACATTGAAGAAAAAGGACTGTTTAAAAAGTCAACCTAA
TTGATATATACCCCTCACACAAATATTAGTGGTCTAAAAAAGAGAGAAAA
CAGCAAAAAAAAAGTAAAGCATAATCAAAAATCCGTCTTCAAAAATTTTC
TCACAATGAAATTTTATAAGCTTAGCTAAAGATTATCCGGCCACACAATT
TTTATCATCGTCATAAAAATCATTCGAAAGCTAATTGATAATAAAATATT
ATTGTCTCCTACCCTTTTGTTCAGAAAGAATTTTCCACGCGTTTCGTACA
TTATCACGACTCTCTCCTAATGGACTTTTTGAACCAACTGATCTCATTGG
GTATCCAGAACAATAACTTCAATTTTAAAACAAAAGGTTTTTATTGCTTC
ATATACAGTAACAGAAAAGTTACCTAGAAACTCCAAGTAGAATCTAGCCT
TTATTTAATTGTATTTTTCTATTGTTCTAAAATCAATCACGTGTGTAATC
GTAAGCTAAAAAGCTAAATTTTATTGACGATACAAAAATAAAGGGGACAA
AGTCTGCATATTTTATGCAATGAGAAAAACATCTGGGGGTGTTGTAGAGA
GTTGAGAGTGAAAAAAGGTGCGTAACAAGATTTTCGAAGATTTTTTTGAT
TAATCCAAGATAGTAACGACTTAAACCGATCAGCGAAAAAAAAAAACGTT
TCACTTCATTATAATTTTTTAAGGTTTTGAAATAATTCATCGGACTAATA
TTATTGATGATCATTATAAGCTTGGTATTTCTTTAAGTATTTTGTTATTC
AAATTCACTACATTTTTTTTATATTGTACAAACTTCTTTTGGTTGGTAAA
GGGAAAGGTCATCATTTTCGAGCTTTGTTGAAACTCAGCAAAAAGGTTTT
TGAGCCATCTTATAAAAGTTTTTGAACCGTAATAACATCGGCGCGATACT
TTGGTGGAACTTATAAGTGAAATCGCTCACATTTTAGTGTGCTCGGAACT
TACAATGTTAACTAGCTATGTAAGTATACAATGAAGTCTTGAATTGAAAA
AAGGCTTGCCAAAGACAGGGGCCACGGCTCCACTTTGAAAGTATTAGGGC
CACATAATATACTGACTAAGGAGACGCCACTGGATGGGGCCGACGGGTGA
AAAGCAATTTTTAGCTCTTTTAGATTACCTAAAACAGACCTGTTTTAGGC
GATCTGAAGGTTTAAGGTTATTAAACAGAATTTGACTTGATTGGTAAATT
TTCTTTTTGTTTTGAAAAAATGTGCCTCCCCCCCGCTGGCGCAGCGCCTG
TAAAGACTACTATTGGTTAATGTCAGAGGATGCTATCGTCTGTTAGAGGG
ACAGTTAACGCTGGGAAAACTTATAAGCGCGTAGTTTACTGTCGTAATGA
GGGGTTACGGAAAGAATAGTGGCGGAAAAGTTAGGAACAAACACTGCTAG
CACTGTAAAAACCGTCATCAATGTTCACCTTGTACCGGGCTTATCTTCGG
CACTCAAATTAATCCCACTTTCTAAATTATTTCCGTTTTAGTGATCTTGT
CTAAGTTGATCTTTGCTTTAGAATTTTAGACAGTAAAGTACAGTAAGAAC
GGGAGTACAATACAAACACAATATTCAATTTCAAAATATTATAGTAAAAG
ATTTTTTCAAGTGACTCTTCGATACTGAATAAATTCAACTTACGCGACAT
TGAGAACGTTGGGTTACAAAAAGATTAGGTTAATGGGTCAAGGAGAAACA
CTCTTCCTCCAAAGCGAAGGTTTGAAAACAGACTTATCTTTTCCCAAGCT
AATTAATTTACCTTTCAACATTGCAACATGCATAGTGCGGTTTTTTTTGT
CAAATAAGGCCACATATCAACCTTAACTATCGAGACTTTATGAGAAAACT
TTACTTAAAATAAGAGAAAAACTGACCCTCAAAATTAGGATTTTACTAAT
ATCAAAATAGTATTAGTTCGATAAGGGGAGCTTCAGGAAGCAGCAAGGTG
GCGATACATGTAGAGTTCGTTACTTTGCCAAAAAGAAATTACGAAACCCT
GCTAATGTTAATTACTAGTTTGTTAGCGTTTTTTGCAAGATGATATGTGA
TATCTTCAATTCAATTTTCGGATGATCATGACAGAAGGCTGATAATCTGG
TTAAAGCGTTACCTACTCACCATTAGCTCTGGATCATATACCACACATTA
ACTAAATCGAGATCTCAAATACTTTATTAATATTGACATTGTGTTTAACT
TATTTTTAACATCTTTATTTCAGATCTCACACGAGCGCGAACGCAGGATG
ACGTGGCCCTATAATCCAGTACCATCCTATCATGTACCACACCATGGACC
ATATAACTTCCCTGGACATTACCCCCTGAATTATTACGGTAAGACTTTTC
AAACTCGAGGTGTATAAAAGTCAAAACCTCAAAACGGCGCTAATTTTTCG
CTGCCAGAACCCTGCTGAAAATATCTGAATTTTCACTTTTGAAGAAAAAG
GTCAAATTCTGTTTTTCGAGTAATTCTGGTAAACGAAGAATACCTTAAAA
AGACTAGTAATATTTCCGTTGGTTGAAATTGTCACAAATACCAAATACAG
AACTAAGCGTTACGTACTTTCATTGGTACAACAAAACGGAGGAAAGTTAA
ACTCGGTAATATTGAAAATAAAACGAAAAGTAACTAACTTACAGTCTCAT
GGTACAGTTTCCATTCTACTTCACTCGACTGTCTTTTCCTAAAGGAATAC
ATGTTTTTTTTTATAAGCATACAAAAATCCGAAAACAGGCTCAAAGATGC
TTAGGTCGAAAGCTTAATAATGCTGAAAAATGCTTGAGGGGATGCTTAAA
TCTAAAGCATAAATTTAAGGAAATACAAAAAATCCGTAAAATTCCAGCCA
AAAAAGCCAAAATCAGGAAAAACATTTCTCGTAGGCTCAAGTTATGCTTG
CCATATGCTTAATTTTTCCCCATATCTGAGCCTAGATATGCTTATAAGTA
CAATGCTTATAAAAAAAATAATTTAGATTTCTAGGTAATAATATTTAAAA
TATTTTGTTAAATTTCAGGATATCCAAGAAAGCAAAGACGTGAGCGTACA
ACATTTACCAAAGGACAATTAGAAATATTGGAGAATTTATTCCGTGAGAC
GAAGTACCCTGATGTTTTTATGCGCGAAGACGTAGCAAGAAGAATCAGCC
TACCTGAATCTAGAGTCCAGGTTAGTTATTATGAAATCTCAACATCTTCT
GATATTATGATAATCTTCATCGCACAACCTATAGACACAAGTATAATAAA
GAAATATTAAGGAGCAATATGTGAGTGGTCTAAAGCAATTAGCTCATAGA
TAGCCGAAATCGCTGGCCCTGTTAAAATAATGGAAACGCGGTCTATGGGT
TGTAGACTACTGGGGTATCTATGTAAAATAAAGACTTTATGCAGAAAGTT
TTTGTTTGTTTTTGTTTTTGTAATGAAAAATTAACTCTGGCTGGCCGGCG
AATTCATAGCAAACGCAGTGTATTTATTAGCGTAAATATGTACTTGAGGC
GAACCGAACTTTTCGAACGGCTAATTGTAATTATTTTCGTACCTTGGACC
GTCGAAATTCGCCGTTTGCCGGGCCTAAATAAGACCCTTAAGCTTTATGT
ATCTAATACATTGCAAGCTGTCGCTGATTCGAACACGATCGGGAACTTCT
TTTTTCGAATTATAGGAGATGAAAGCATTTAATAAGAGGCTCCACTTGAC
GAAATTTAGTCCAAATTATAAAGAGATTAAAATAATAGAAATCGATAATC
TCCGATTATTTAACATTTTCAAACTTTTTTCATATTCCAGGTTTGGTTTA
AAAACAGGCGTGCAAAACACCGACAGAAATCCAAGAAATCATCATCTACA
TCACAAAGTACGAACTCAGATTCCAGTCCTGAACGAGGAGACCGTTCGCC
TGCCCTCCAATCTCCTAACTCTGATAAATCACACAACATTGACCCACCAC
CACTTTCGTCACCGGCAAAACCGAACCATAGCAACAGCAACCATAGCAAC
AGCAACCATAGCAGCAGTAATAACAACAATAATAATGGCAGTAATGGAAA
CACAACATCAGAATCAACAAACGAGTTTAATAACAACAAATCCCAATGCA
CATTCAATAACAACCATTTACCTCAAAATCCATTAACACCAACCACGCCT
ACAAACACGGGCGGATATCCGCCACTCGAAAGAGCACCCTCGTATCCTAA
CTACATCCCTCAATCTTTCCAGCAATCGCAAAGAGGATATGGTGGACAAT
CAGATTCGTCATACTGTCCATATTCACCGACCAGCGGTCGTCAATCTTTC
TACCAATCCTCACATCTGCACCCACATTCAACTAGCGATTACCAGCCATG
TGCAGTAGATGTTCATGGCTCCACACCTTTAAGTCCTGGTTGGAATACAT
ATGGTCCGAACATATGAGACTAGTTTAAATAACTACATTTAAGTGATTCA
CCAAAGAATAGTGATGTCAGATCTAACAAGTTTCCCACAATCTAACAAGA
TCGAAGTGACACAAACTAAACCCTAATTGAAAATAAGACAGAGACATGTC
TCTTTAAGAAATGGTTAGTGGTTTCCGCATATTCAATTGCTGATAAAACA
GTAGAAGTAATTGGTAGCGAACCAACGACAGGATAACTCTTAATTCCGAA
ATTCTGTATGCGCGGCAAGGGAAAAAGGAAACTTAATTTATTCAGGTCAT
ATTGGCTTTTAATTTAGTTTGAAACATGATTTCTCATCTCGCCTATCAGT
TTTCTGTTTTCAAATTTGAAATGTAATAAAATGTAAAGAGCTGAAACTGC
AGAAAATTTAGAACGAGACAATTTCTTTTTTTAAAGATATTTTTTTGAAC
TTTTAGAAATTTTTCATTTTTCCAATAATTCTAAGACAAACGAATATATT
ATTGTGTATAGCTGATATTTAAAAATATCATTTTTTTCTCGAATCCGAAA
GGGACTAGTTTTTTTTTCAATGTAAATACATCAAAACTAATGAAATGAAA
CAATACTCGAGAACATCATTA Coding sequence (CDS) from alignment at sc0000135_pilon:746215..753485- >MSTRG.15397.1.p1 ID=MSTRG.15397.1.p1|Name=MSTRG.15397.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2610bp|location=Sequence derived from alignment at sc0000135_pilon:746215..753485- (Clytia hemisphaerica_ch_hm2_pilon)
GTTTGGTTTAAAAACAGGCGTGCAAAACACCGACAGAAATCCAAGAAATC
ATCATCTACATCACAAAGTACGAACTCAGATTCCAGTCCTGAACGAGGAG
ACCGTTCGCCTGCCCTCCAATCTCCTAACTCTGATAAATCACACAACATT
GACCCACCACCACTTTCGTCACCGGCAAAACCGAACCATAGCAACAGCAA
CCATAGCAACAGCAACCATAGCAGCAGTAATAACAACAATAATAATGGCA
GTAATGGAAACACAACATCAGAATCAACAAACGAGTTTAATAACAACAAA
TCCCAATGCACATTCAATAACAACCATTTACCTCAAAATCCATTAACACC
AACCACGCCTACAAACACGGGCGGATATCCGCCACTCGAAAGAGCACCCT
CGTATCCTAACTACATCCCTCAATCTTTCCAGCAATCGCAAAGAGGATAT
GGTGGACAATCAGATTCGTCATACTGTCCATATTCACCGACCAGCGGTCG
TCAATCTTTCTACCAATCCTCACATCTGCACCCACATTCAACTAGCGATT
ACCAGCCATGTGCAGTAGATGTTCATGGCTCCACACCTTTAAGTCCTGGT
TGGAATACATATGGTCCGAACATATGAGATATCCAAGAAAGCAAAGACGT
GAGCGTACAACATTTACCAAAGGACAATTAGAAATATTGGAGAATTTATT
CCGTGAGACGAAGTACCCTGATGTTTTTATGCGCGAAGACGTAGCAAGAA
GAATCAGCCTACCTGAATCTAGAGTCCAGATGACGTGGCCCTATAATCCA
GTACCATCCTATCATGTACCACACCATGGACCATATAACTTCCCTGGACA
TTACCCCCTGAATTATTACGGTTTGGTTTAAAAACAGGCGTGCAAAACAC
CGACAGAAATCCAAGAAATCATCATCTACATCACAAAGTACGAACTCAGA
TTCCAGTCCTGAACGAGGAGACCGTTCGCCTGCCCTCCAATCTCCTAACT
CTGATAAATCACACAACATTGACCCACCACCACTTTCGTCACCGGCAAAA
CCGAACCATAGCAACAGCAACCATAGCAACAGCAACCATAGCAGCAGTAA
TAACAACAATAATAATGGCAGTAATGGAAACACAACATCAGAATCAACAA
ACGAGTTTAATAACAACAAATCCCAATGCACATTCAATAACAACCATTTA
CCTCAAAATCCATTAACACCAACCACGCCTACAAACACGGGCGGATATCC
GCCACTCGAAAGAGCACCCTCGTATCCTAACTACATCCCTCAATCTTTCC
AGCAATCGCAAAGAGGATATGGTGGACAATCAGATTCGTCATACTGTCCA
TATTCACCGACCAGCGGTCGTCAATCTTTCTACCAATCCTCACATCTGCA
CCCACATTCAACTAGCGATTACCAGCCATGTGCAGTAGATGTTCATGGCT
CCACACCTTTAAGTCCTGGTTGGAATACATATGGTCCGAACATATGAGAT
ATCCAAGAAAGCAAAGACGTGAGCGTACAACATTTACCAAAGGACAATTA
GAAATATTGGAGAATTTATTCCGTGAGACGAAGTACCCTGATGTTTTTAT
GCGCGAAGACGTAGCAAGAAGAATCAGCCTACCTGAATCTAGAGTCCAGA
TGACGTGGCCCTATAATCCAGTACCATCCTATCATGTACCACACCATGGA
CCATATAACTTCCCTGGACATTACCCCCTGAATTATTACGGTTTGGTTTA
AAAACAGGCGTGCAAAACACCGACAGAAATCCAAGAAATCATCATCTACA
TCACAAAGTACGAACTCAGATTCCAGTCCTGAACGAGGAGACCGTTCGCC
TGCCCTCCAATCTCCTAACTCTGATAAATCACACAACATTGACCCACCAC
CACTTTCGTCACCGGCAAAACCGAACCATAGCAACAGCAACCATAGCAAC
AGCAACCATAGCAGCAGTAATAACAACAATAATAATGGCAGTAATGGAAA
CACAACATCAGAATCAACAAACGAGTTTAATAACAACAAATCCCAATGCA
CATTCAATAACAACCATTTACCTCAAAATCCATTAACACCAACCACGCCT
ACAAACACGGGCGGATATCCGCCACTCGAAAGAGCACCCTCGTATCCTAA
CTACATCCCTCAATCTTTCCAGCAATCGCAAAGAGGATATGGTGGACAAT
CAGATTCGTCATACTGTCCATATTCACCGACCAGCGGTCGTCAATCTTTC
TACCAATCCTCACATCTGCACCCACATTCAACTAGCGATTACCAGCCATG
TGCAGTAGATGTTCATGGCTCCACACCTTTAAGTCCTGGTTGGAATACAT
ATGGTCCGAACATATGAGATATCCAAGAAAGCAAAGACGTGAGCGTACAA
CATTTACCAAAGGACAATTAGAAATATTGGAGAATTTATTCCGTGAGACG
AAGTACCCTGATGTTTTTATGCGCGAAGACGTAGCAAGAAGAATCAGCCT
ACCTGAATCTAGAGTCCAGATGACGTGGCCCTATAATCCAGTACCATCCT
ATCATGTACCACACCATGGACCATATAACTTCCCTGGACATTACCCCCTG
AATTATTACG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000135_pilon | genome | sc0000135_pilon:746215..753485 - |
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