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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000135_pilon:558080..562827+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.15386.1.p1 ID=MSTRG.15386.1.p1|Name=MSTRG.15386.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4748bp|location=Sequence derived from alignment at sc0000135_pilon:558080..562827+ (Clytia hemisphaerica_ch_hm2_pilon)
CAAATTTTGCTAGACTAGACAGTAAGACAGGTCTGAATTGTACATGGTGG
TAATGAAGtctttgatattttcatattttgattgatCCACTTGTGtaatt
tcttttgtctttttagaaaaaaaagtgtaaaattatcaaaagtgCAAAAT
GGTTCTTCTTGATAATGATACGGTATGATTTCTCAGTTGGTTCTTGTgca
ggaacacttatgtaaaaataagacCTTCAACTAAATGGATGGTCAAGGGG
GTGGATAATTCCACTAGAGACAACAggggggggtcaggatccaAATAACC
CCAGGGCCgggggtggtgtcaattttttttttcaaattttaaaaagtcaa
gttggtatcgataccaaaatgagggggtgggtccccctttttttgaaaat
tagggaatctttaagttggtattgataccaaaatgagggggtgggtcccc
ctttttttaattttttctgaatttgaaattggtatctgacttaaaatgtt
gtataatgtaagtataaaaacttatttgaatcaTTTACATTATTATACTC
TGattccatataaaagcattcttcattctacaattaaaattaaattttta
tttaactttctctgctctcaatcctttcaatcaaccaaaattcattcaaa
actagagttgAACAAACTGAATCAAGTCTTAGCAGATTATTAGAACTTTT
TTAGTCGTGATAGAATTTTTCTGTACATAACGTTCATCATAATATAGGCT
ATGTTACAATGCTAATACAATGAGTTTTTTATCTAGTCTAGTTTATCaac
tagttttatgaatttgatacattttgccaatttagttcaagaaacttaat
ttacgttgtgttagaatgagaaaaacttgttttcattttcaggagtcCAA
AGTACATAATATAAGtgacatagcgtcagcctgggttaaggtcccaggca
aaaattaggtgttaagttttaagtccccccaaagatttatgaattttttg
ttagcccccaggacttttaaccctagacactttcaaaaaagttgatccag
taaaaaaggttttttccaaaatgtgaATTGTGTTCAGTcctaagtttaag
ataaaatattttgcacgcTTTCTCTAGAAATATTGCACGGCAggcgaaaa
tttttcagattcatgagcttcaatttgagtaaaTGAAGCCAACTactaag
ctgaattattttagccccacgttaagtgatgaaattttagctccccccaa
gtacataggtccccccaaaaaagtggtgtacttccagccccctccttttt
tgggaaagatttaaggtgtaacccccccccccaaccagcagggggggCTG
ACACTATGAGTGATTAATAagaggaatgttctttgaattAAAACATCCAC
ATATTTAGTGTCCTTTGTTTGCAGTATCCTATGCATTTAACCTcttgcat
ttttactgattgccaatttaggagggtgggtccccctttttttagaaaat
tgggtttttcaagttggtattgataccaatttagggggtggtggtgtcta
ctactttcaaatcttgaaaagtcaggtttttgggccctgggttggtatcc
tggaccctgacccccccctggAGACAAGGATGTTTTCATCTCCTTTTATA
GTCAAGGCCAAAATATTGAAAGTTATTTCATTATaatttttaaactaaat
tttttttttagtttttgactcAACTGACTTTACTGTTCAACAAAACCAGA
AGTATTGGAACTGTTTTTGTTACAATGAAGCAATGTAAGtttttttATAC
CCTCAATCGTGgtcgcaaatagaaaaggggatagactccctcactctgGC
TTCCTGACAGCCACCAAATGATTATACTTATACTTAGTTACTTATACCTT
TACCTATACCATCAATTGGAGTATCTTGTTTAGGGGTATATAAGGAGTGT
CTCCTTAAAGTATTCCTTTGATCTttattttgctatattttttacCTTTA
AATTTGGATGTCATTCTTGTTATTtgcatcaaattttcaaaacataaaaa
ttggtAGAATCTTGATTTCCTGTTTTAATTctagctttttctaatcttta
TGCTGTTCTGGACACAGtttttggttaattttgaaattaattgggtgttt
gtgaatttttgcctttttcaaaagctaaaatctaccaaaattacAAGAGA
TTTTCTGTGATAACTTCTTTCTATCAGGGTCAAATTTTAGCTTAAAATGT
TCAGGCTCTatcatgaattttcaattttaataccgggtgcgccacaaaaa
agtttctctctttgaaactaattttctcgaaatctaaaaaatttaaaaga
accattcctatttcattggaaagaagaaagataaacttaaattttgttgg
gtcatttattaaatttgattcattagatcaaaagttatactcaattgaat
gaaaaagttactttcagaaagtgctcgaaaacgttgaaaatcgacctatc
aaatttttattttaaaattggcaatcacaatagcctttgcatgattaaga
gcatttttcagtaactaaacacataaattttgaaactgaagggttgaaag
ggtttaaaatattcatcaaaatcactttaatttacttttaccgaaatttt
cctccgatttttggttctagacttgataaagtctatgtaaggctggatct
acctcgaaacccgtaTTTGATGtacttttatgaattttatcagatttttt
ggcctttttggaCGAATTCTcttcatttcattgaaattcaaccttccttt
atacaaaaaaggtcatttagacagctaattatcatttttaataacagaaa
cgaaaatactgatgtatcatgtaattatgcttctgtttgatttgataggt
cgatttttaacgtttttgagaacttttagaaagaagcttttttattcaat
tgatcataacttttgatctaatgaatcgaatttaataaatgacccatcaa
aactTAAGTTTACCTTTCTCCTtgccaatgaaataggaatggttctttta
aaatttttagatttcaagaaaattagtttcaaagagagaaacttttttgt
ggtgcacccggtagaatGGAAATTTATTTGTATGATCCAatgtaattttt
taagaaatttttttctttagaccACGGAGAGACAAAACCAAAACCTCGAA
ATCTCAAATCAACAGACCCCAACCCACATGCAACTGGTGAACCAAGGTGT
TTATTTAGAGCTACCAATGGCAAGAAGAAATTGAGCACCGTTGTAAGTAT
AACGCTTGAGACAATAATCATGAGaaatttttgaatgccatcaATGATAA
TCAATGATAATCAATAAAGTTTTTACTCAAACCTCGTGAGTCAAGAGACA
AGATTTTTTCATCATACTATTAGAAACATAATATCCaaaaaaaCCTTGAT
CGACCttctgtttttttctggaatgagTAACTAAGATAGTCACTCGGATT
CACTTCAgaattttccagtgtttttgaTTGGGAAAATGATGATGTTTTTA
TTACACAAGATTTTAAACATCTATTAAATgagtttccaattttttttcaa
tggatTCTACTTGTATGTTCTggattgattattttcagtcgAAAATAATA
CATTGaagaataaaaagatattttcttttattCCAGGTGATGCATAAAGA
TGTTAATAAATTTCAAGTAGTAAGtatatgatttttgatttcgCTAGGAA
GTGACGGCATTATATAATTccatttgattttcaaagaagGGAGCAAATAC
GTATTTTGAGCTTTTTGTTGTTAATTTGtagtatcaaactttttcctTGC
CTGTTCTTGAATTGTAGATTTCCCATTTTCTTTCGTACTTTATTGTCATT
TTACTAATCAAATATATTGTTGTTCAAATTTCAGGCATACGCATCTCTAT
TGAAAACGAATATCGACAGTCTCAAGAAAAGAGACAAGAAATCCAAAAAG
TCCAAGAAAACGAAAGCAACACAGTAGAAtcgtaaatttaaaaaatcgaa
ataacataaaaattatatatatagtCCATCATTTGTCATCATTTTTGTGC
GGGATTGAGATTCATGGTGTTCGATTTTCATGGTGGGATCGTCAAATGGA
CAAGTAAAAGTTACTTTCAAGGTACTGACTATGAATTTGGATTCTGTGCA
TGCATGAAAATGGACTTGAAATGATTTATCAAATGAACTCATGTATTATG
GACAATTTTTTGAGTGATGATGTTAAAATTGATGTTTGATAAATAGAATT
TATTTATTGGTTGCTTTCAAGAGACTTGGGGGTCAATGCTAAATAATACT
CGAATTTATAACCCTTTGACGTGTTTGAAAGTGAATTTTTAGTTCAAAAg
cttattcaaaatattttaaattcgGTCTTTTTATCAGATCATTCtgaata
tttcttatattttcttGGGttttttttGAAGGCGACTATAATTCTAGAAC
TTCACAAATGAATCAACTGTTAGAGCTGTATTTTTTATTTCCACTACATA
TATGATAACAAACATCAGCCctggaaattaagttttgtgtcctttggttt
ttttattttgggtaGAAATTGTAATCGAGTTTATTAGTGAAATTTAGAAT
TGCAGTATATATAATAAAACCATGATTTGGTAAGAATATATTacaataat
cttttttttttttaataatttttcctcCTTATTAATCTTAAactaaaa Coding sequence (CDS) from alignment at sc0000135_pilon:558080..562827+ >MSTRG.15386.1.p1 ID=MSTRG.15386.1.p1|Name=MSTRG.15386.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1725bp|location=Sequence derived from alignment at sc0000135_pilon:558080..562827+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTTCTTCTTGATAATGATACGtttttgactcAACTGACTTTACTGTT
CAACAAAACCAGAAGTATTGGAACTGTTTTTGTTACAATGAAGCAATacc
ACGGAGAGACAAAACCAAAACCTCGAAATCTCAAATCAACAGACCCCAAC
CCACATGCAACTGGTGAACCAAGGTGTTTATTTAGAGCTACCAATGGCAA
GAAGAAATTGAGCACCGTTGTGATGCATAAAGATGTTAATAAATTTCAAG
TAGCATACGCATCTCTATTGAAAACGAATATCGACAGTCTCAAGAAAAGA
GACAAGAAATCCAAAAAGTCCAAGAAAACGAAAGCAACACAGTAGATGGT
TCTTCTTGATAATGATACGtttttgactcAACTGACTTTACTGTTCAACA
AAACCAGAAGTATTGGAACTGTTTTTGTTACAATGAAGCAATaccACGGA
GAGACAAAACCAAAACCTCGAAATCTCAAATCAACAGACCCCAACCCACA
TGCAACTGGTGAACCAAGGTGTTTATTTAGAGCTACCAATGGCAAGAAGA
AATTGAGCACCGTTGTGATGCATAAAGATGTTAATAAATTTCAAGTAGCA
TACGCATCTCTATTGAAAACGAATATCGACAGTCTCAAGAAAAGAGACAA
GAAATCCAAAAAGTCCAAGAAAACGAAAGCAACACAGTAGATGGTTCTTC
TTGATAATGATACGtttttgactcAACTGACTTTACTGTTCAACAAAACC
AGAAGTATTGGAACTGTTTTTGTTACAATGAAGCAATaccACGGAGAGAC
AAAACCAAAACCTCGAAATCTCAAATCAACAGACCCCAACCCACATGCAA
CTGGTGAACCAAGGTGTTTATTTAGAGCTACCAATGGCAAGAAGAAATTG
AGCACCGTTGTGATGCATAAAGATGTTAATAAATTTCAAGTAGCATACGC
ATCTCTATTGAAAACGAATATCGACAGTCTCAAGAAAAGAGACAAGAAAT
CCAAAAAGTCCAAGAAAACGAAAGCAACACAGTAGATGGTTCTTCTTGAT
AATGATACGtttttgactcAACTGACTTTACTGTTCAACAAAACCAGAAG
TATTGGAACTGTTTTTGTTACAATGAAGCAATaccACGGAGAGACAAAAC
CAAAACCTCGAAATCTCAAATCAACAGACCCCAACCCACATGCAACTGGT
GAACCAAGGTGTTTATTTAGAGCTACCAATGGCAAGAAGAAATTGAGCAC
CGTTGTGATGCATAAAGATGTTAATAAATTTCAAGTAGCATACGCATCTC
TATTGAAAACGAATATCGACAGTCTCAAGAAAAGAGACAAGAAATCCAAA
AAGTCCAAGAAAACGAAAGCAACACAGTAGATGGTTCTTCTTGATAATGA
TACGtttttgactcAACTGACTTTACTGTTCAACAAAACCAGAAGTATTG
GAACTGTTTTTGTTACAATGAAGCAATaccACGGAGAGACAAAACCAAAA
CCTCGAAATCTCAAATCAACAGACCCCAACCCACATGCAACTGGTGAACC
AAGGTGTTTATTTAGAGCTACCAATGGCAAGAAGAAATTGAGCACCGTTG
TGATGCATAAAGATGTTAATAAATTTCAAGTAGCATACGCATCTCTATTG
AAAACGAATATCGACAGTCTCAAGAAAAGAGACAAGAAATCCAAAAAGTC
CAAGAAAACGAAAGCAACACAGTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000135_pilon | genome | sc0000135_pilon:558080..562827 + |
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