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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000134_pilon:738951..748569+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.15329.4.p1 ID=MSTRG.15329.4.p1|Name=MSTRG.15329.4.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=9619bp|location=Sequence derived from alignment at sc0000134_pilon:738951..748569+ (Clytia hemisphaerica_ch_hm2_pilon)
AACGAAAAACAAAGAAACTGTGCCTCAAATAGGTGAAATTGTAGAAGAGG
TTATGAAACGAATCAATGCTAATGTGATACCcacacaaaataacaaaaag
tcgTCTACGAAGAAAAAACGATCAAGGATGGTGGAAGTCAGTGATAGCAG
TGAAGAAAGTGAAGGAAGTAACACGGAATCGAGTTCGTCGGACGAGGAGC
CACCCAAACGAAAGAAGTCGAAAAAGGGTAAGAGAACGTCCTTTTTAAGA
ACTGCTTCGTCCTGAGATACAGCGTAGCTCCTGCTGTCAAGAGCAAGATT
TTGCAGGGAAAATACGTACCTTTATATAAACTCTTTCCTGGATTTAAGAA
CAGAGGCCAGGAGACAGCCAGTGTATGGAGTGAGGATGGCAAGATTCGGC
TAAATGTTGGGGATGGAAACAAGGAACGTAGACTGGGGAAGCAGACGTTA
GAGGTTGCCCAAATGCTTATTGCTCTCATGTACAAGGAACTCATTTCAGC
CGATTTTCCTACGAGAGTGGTTGACATTGATAACTATATGGCTAACATTG
TAATGGTAGCTAGCAAATATAGTGGGAAAGCATATTGGTTTTATCATTTA
TATTTTTGGGATAGGGCAGCTGAGTACAGTGAAAGGGGGGAGGAATTGAA
CTGGTCTGCCCTAGACGCGGAAGCTTTGCATGCGGTGATTGCGAAAAGCT
CTTCTGCCAACTACTGCGACCAATGTCAGTCGTGGTATCACAATCCAGCG
CAGTGTCCGTTCAGCCTGAGACAAGAATCGCCCTCCCAAGAAAGCTACAG
CTCCCCTAACGGGGCTGGTAAGTCTACTTCTTCGTCCACTTTTCCACTCC
TTAATAACAGGGCGAGGGCATTTTATAAAGGTAAGGAGATTTTGCACTCA
GTTCAATTATAGCTTATGCCATAAGAAGTGTCCCTTTCTTCATATGTGTA
AGTATTGTAATAGACACGATCACTCCATCAAAAAGTGCTCAGAGGCTCCA
GAAGAGTGAGCTCccctgtaaatatttctttgctaGaaaaaGAGCTAGCA
AACCATCCTGATAGAGAATTTGTGGAATTTTTCTCTGAaggattttattt
tggttttgatgTAGGGTATTATGGTCCAGATAGATCTAAAGGTCTCGAGA
AATCTACAATCGGCTCGAGATAACCCAGAAGTGGTGGATGTTTACCTGCA
GGACGAAATAAGGAAGGGTAGAATAATGGGACCTTTTGACTCTCCCcctt
ttgagaattttcaatGTCAACCGATTGGGATTGTACCaaaaaaaGTACCT
GGAAAATTTCGCACGATTATGGACCTTTCATACCCAGAGGGGTCATCAGT
TAATGATTTTATAAACAAGTAAGAGTTTTCATTGAAGTACGTCACAGTTG
ACAGAGCAATCGAGTATATTTTACAGTTAGGGCGAGGATGTCTTTTAAGT
AAAGTCGACATTGAAGGGGCTTTCAGGATAATTCCCATATGTCCAGAGAA
CTTTAGGCTACTTGGAATTCTTTGGAAGGAGAAATACTACTATGATACCA
GGCTAAGTATgggggggggTACATCTAGTCCTGCTTTGTTTGACAGGCTG
TCAGAAGCACTTGAATGGCTTACTGCTAGGAAATATGGAGTAGATTATAT
ATGTCACCTGCTTGACGACTTTCTAGTGGCTAAACTACCAAGCAAGAAAG
GCGAGTCATTGAATATAATTTTGGAGCTTTTCCAGAGGTTAGGTATTCCT
ATAGCACAACATAAAGTGGAGGGTCCTTCTCAGAAGCTTGAGTTTTTGGG
CATTACACTTCCGACACTTGATACTGTAAAGCTGAAAGCTTAACTGTCTG
ATGAAAAGGTTCACAGGTTAATTATTGGGGGGATAGAAAGTTTTTTGGCC
AGAAAGAAGTGCTCTAAACGAGAGCTTTTGAGCTTGATAGGCTCATTGAG
CTTTGCGTGTAAGGTTGTTGCTCCAGGGCGAATTTTCCTTCATAGATTGA
TTACCCTAAGTTGCACGGTCAGAAAGCTTCATTATAAGGTTTATATCAAT
CAGAGCACCAGAGAGGATCTTAAGATGTGGCTAGACTTTCTTAAAAGTTG
GAATGgtaaaagtttctttttattagaaagagaGCTGAGTTTGGCAAGTG
ATCTAAAGTTTTTTACTGATGCTTCCAGTACGATAGGTTATGGTGGCTGT
TTCGGTagaccaacttttctcaggattgaataatagaaatcttttgattt
ttggtataaaggtgcaaaatgTttTGTGGCCAAAATGTGACGGAGCTTGA
TTTTCGAAAAAATAATTTTTGGGGCAAATTTGGGCCAATAAACGGCTAAA
AAACGGTTTTTTTGAACTTTGTGAAAAATTGGATCATTAATTTTTTCTGA
TTTTTTGCATCAAAGTAGGGTACCATCATAGGTATAAGATGGCTCACGCA
GATTTTTACAAAAAAATTTGTTGGCTTAAAAAACGTATGTTTATCTATAA
GAATCACTATTAATAAGCATACATCAATGTTCTTAGAGTTCTTTTGAGTT
TTCAGGAAACACTTATTATTTTTTGGCTGAAAAACAAATCTTTATCTATT
AGAATCACAATTAATAAGCATACAATGTTCTTAGAGTTCTTTTGAGTTTT
CTGGAAACACTACTAGATAGCGGGATTTGGAGTACaggtacatttttgaa
aaaatttttaaattgaaaattaaaaaaaaattcgaaaaaaattataagta
cataaaatttgagatttcaaaattggaaatttaaaattttaaaatttttg
aaaaaagaaaaataaaagtggtcaaaattagaaatcacccgcgcgacaaa
aatAATCCGCGTGATTTAAAGAAaatgctgagtcatcaaaaaaagttgtc
aaaaattgtgaaattttcaattttgttgaataatttttgatgatttgaaa
ttAGGAAAGtggtcaaaaatcgaaaaaaggaaattccctgaaaaaGTTGT
TGGTTGGGGTTGTACTTATATAATAAAAGATGACCGCAAATTTATTTCAC
TCAACTactaaaataaataagaatGAAATGATGAATGAATCGGTTAAAGA
GTTACGTGAGTAAGGAAGGTTCCTTGGAATTCGTGGTTTATGGAAGAAAA
ACAAGGAACAAATTCGAGAGCATTTATTTAATAGTGTTTTTAAAgaagtt
acacgttttttttataagaacaaactatataagaacataaggcttcgagg
cccaacaatctaagaacattctaagaacatacttaGGCTTTGGAgattta
aaaacatgcaatttcttaagaaattacatcaaaatgcttaaaaaatgctg
aaaatatgAACATTTAATTAATTAAAAGTGTTCAAATTAAGTTAGTTGCT
TCAAATGAGCCTTTGATGGAGTGTGGGCCATTGCCAGAATGGTTAGGAAA
GAAGCGATGTATTTATGCGATCGATAAGTATGATGATAATCTTTGTGTTT
GGAGGTGTTTAGCGATATATAAGCGTTTAGAAAGTGGTAGAACTAATCAG
GTTGAAAAGCGAACATGTATAGCAGCTCTTGAATTAGCTAGAGATTATTA
TGGAGATCTAACTTTGACGAACGAAACTGTTAGAGCAACaaaattgattg
attttgaAGGCATTGCAAAGCATCATGATGTTAACATCATGCTTTATGAA
CCAAAACAAATAGAGATTTAGCGGCTTGTGTATGGTAAACTTCAATATAA
GAAAGATTTACCTACGATGAATATTGGTTTGTTAGAGGGTCACTGTTTTT
ATATTAAAGATGTAAGTATTTTAGCAAAACGATGAATGTAAAGGATGTAA
GCAGATTTTTAAACAAAGTAATCATTTATTGAAACATTTGCAAAAGGATC
GATGTAACGGAGGAAAAACGAAGGAAATATGTAAAGGAAAACAGTTTAGA
CGGATTTTTAGCGCTTCAGATAATGTGTTTTATGGAGGTGATACAGGATT
TAGTTATACGGCTTGTCAGTGGATTGAGGCTGAAAGTTCAAAGTTAGGAA
AACACATCCATCACAAAATGTGCGGACATGGTGGAGAGAGACAGGTGATG
GCTATGATTAAAGACGATGAAGGGAAAGAACAGGCTTCTTTTTATCCTGT
AGACGGATATGAGCCAGAAACGAATACCGTGTATCAATATAACGGTTGTA
AATGGCACGGTCGTACATGTTTGGGAAATAGAACAAACAGACAGAAAAAG
TGCTATTATTCTACAAAGACTAGAGACTATCATATTGTAAATAATGGCTA
TAATTTGGTGAAGGTTTGGGAATGTGAGAAACCAGAGTTGAGTAACaagt
tttttgaatgaaaatttacTCCTTATCCACATTTTATTGTGTATGATTTT
GAAGCATGAGTTTTACCTGAAAATATACGACCGACAGAAGATCTAACCTA
TATTCACAAGCAAGTAGCAGTTAGCGTTGCAATTCACGACAGTTTGAGTA
AAGAGCCAGTGTATCTTGAAGATGCAGATCCAAAAGAATTGACGCGACGA
TTTATATATCAGAAACAAGAAGCTATTATAGAGGACGTTGAAAAGATTTA
ACCTCGTCCTAGCGACTTTAAGATGTTACCTGAAAAAGCGTTGTAATGAG
TGGGTATTAAGTATTTAAGTAAGTACAAAAATCATGCTGAGTGtgttgtg
ttttgaaaaaaaaattagtaaacaACTTTTCTAGAGAAAATCCATGGTCT
Agtggttaaaaaaaattgaaaaagctgaacagagaagtaaaaaaattgtg
gtattttaatttgaaaagcTGTAAAAAATAAACATGGTAAAGTGTGGAAC
TTGTAAAGAAGAATTGacacaacaaaGaaaagaacctCGTTACCATAAAG
GTGAGGTAGTTGGATGGACGATATATACTGGATGTGCAAAAAATCACCAT
ATAACGACTGAATTCAATAAGAAATGATAATCAAATGCtgaaatttttat
tttaaagaaaaagtttgtaatTTATTTGAATTTACACAAAGAATGTCCAA
TTCAATTCATCTATAGTAGAGTACATTAAAAACTGGAATCACATTGCGAC
GCTGTTGTGTATCGACCTGAAGTTCACttataatttccaaaaaagaatac
aaaataaaattgatattttttttcattttgacttgggtttaattttatga
acgtttatacacgtttttttttataagaacgtcaaaaatttttgaagcct
tcggatgtttttagttttttggatttgaagcctaaaaatgttcttaaaat
gttcttattttcagcattttttgagcattttgatgtaatttcttaggaaa
ttgcatgtttttaagtctccaaagccttagtatgttcttagaatgttctt
aaatttttgggctcgaagccttatgttcttatatagtttgttcttataaa
aaaaaacgtgtaatacacTTTATTTTATAAGTCTGAAATTGGACTTAATA
TCATGGTAATGTTTTGGGTAACGGGCTCACTTACCCTTGTAATTGCCTCT
TTCTCCTTTATACTGCCTTTTCTAAATCCAGATCGAATCGAAAGTTTCAA
AGTAAAGAATTTAGGGCCGTcctttcttcaaattttatcCAACAGTGTTA
CTTTAAATCTCTATCATgatgatttcaaatttgttactttctttcttttt
tgcatGTAACtgtgttttttggacctacctcggtggggtggaggtcctat
aaattaacctgtgtttgttcgtccgtttgtctgttaccaacttttctcag
gattaaatagaaatcttttgatttttggtacaaaggtgcaaaatgattgt
ggccaaaatgtgatggagcccgattttcataaaaataatttttagggcaa
atttgggccaagaaaagttggatcattaattttatctgattttttacatg
aaagtagggtaccatcaaaAGGTAAAGATGGCTCacgcagatttttgcaa
aaaaatttgttggctcaaaaaacgcatgtttatctataagaatcactatt
aataagcatacatcaatgttcttagagTTCTTTTGACTTTTCaggaaaca
cttattattttttttggctgaaaacaaatctttatctataagaatcacta
tttttaagcatactcttaggtgctaaataaacgcccccccccccgcttgt
taatttttcgaaaattttccaacccccctggaccttattaggaccctccc
gtttattaatttttaaaaatattttcagctgtcaaagagaaggcccctta
ttttgctctaaataggctgattttagcctttttttaccatatttttgggt
tttcagaagtacgaTTTCAAACCCCCCTGGCAATTAGATCCTCCCCGTTt
aataaaatctcaaaaaattccCAACCACCCTGTTCATTcaaaccccccgt
ttattcgaaccccccgtttattcggcacctaagagtacagtagatcaatg
ttcttagccaaatcattattttattattattttttctaaacaaagaaaat
gtcaccttagagtgcaatggtttgagttttctagaaaccttatttattaa
gctgtgcgtttttctgatagtgcattgttttcataaaatttctatttcaa
AAGTCTCTATATATGTTTTGATAGTTTCTTCAAATAGATAttctttcatt
atattttttgtattttgaccaattATGTCGTATGTCTATCATTGtatcaa
tgttcattgattagttttgataaccaggtaggtccataaaagtatcactt
gttttctttagaaaattacgtttgaaaaatgaatgaaattgaagaaatga
aaataaagactgaacaagaagaagaTCATGGTTGTTATGAAACGAATCAT
GAACATTTGGAAATCATTATCAAACTGGAAGATGAATCAATTGGATATCC
AGACGACGAAATTTTTGAACCATTAAAAAACCATGAAAGTGAACTATTTA
AAAGTTCTTCTAGAAATGTAAATGTGAACGATGTTACGTCACCCAAAGAA
ACAAACCCACAATATTATGAAATAACCATTAAACTTGAAGATGAGTCAAA
ACCTAAAGATGGTAAAGATCAAAGTGCACAGTTAATGgatattttggaaa
atcaaaattccGTAAATATTAACGATGGAACAAATTGTTTTGAACAGTTT
TCACCGATTGAAGAAATTAATTCACAGATCGGAGAGGAAATCACTattaa
atttgaagatgaattgcaaaattttcaaagcaatgaaaatgaaagtctaC
ATGCAATTATAAAGGCATTTGAGTGTCAGGAATGTGGTGAATCTTTTGCT
ACAAAGAGAAATTTGGTGATGCATCAAGTAACAGTCCATGAGGGAATAAA
TCCTTTTGagtgtcaagaatgtggtaagtCTTTCGGAAAGAAATCGAACT
TAACTTTACACCAACTAACTGTCCATCAAGGTATAAAGGCCTTTACATGT
GAAGAATCTGGTAAATCCTTTGGACAGAAAGCGAACTTAACTTCTCATCA
AAGAACTGTTCATGGAGGTGTAAAGCCTTTTCAATGTCAAGAATTTGGTA
AAACTTTTGGACAGAAAGCGAACTTAACTTCTCACCAAAAAACTGTTCAT
CAAGGTATTAAGGCCTTTAAATGTCAAGAATGTAGTAAATGTTTCGCAGA
GAAATCTTTTCGACGCAAGACGACCTTAACTTCTCACCAAAAAACTGTTC
ATGAAAGTGTAAAGGCCTTcaaatgtcaagaatgtggtaacTGttttttt
ACAGAGATTAATTTGAAAAGGCATCAAAAAACGGTCCATCAGGGTGTAAA
AGCCTTTAAATGTCAAGAATGTAGTAAATGTTTTgcagagaaaaaaaact
taacttCTCATCAAAGAACAGTCCATCAAGGTATGAAACCATTTTtgtgt
caagaatgtggtaaatcttttgggCAGAGAACAAACTTAACTTCTCATCA
AAGAACTGTTCATGAAGGTGTAAAGGCCTTTAAATGCCAAGAATGTGATA
AGTCTTTTACGAGAAAAAGCAATTTGAAGGTGCATCAAAAAACGGTCCAT
CAAGGTGTAAAAGCCTTTAAATGTCAAGAATGTAGTAAATGTTTTGGACA
AAATACAGACTTAACTTCTCATCAAAGAACAGTCCATCAAGGTATGAAAC
CATTTTTGTgccaagaatgtggtaaatcatTTGGGAAGAAAACAAACCTA
ACTTCTCACCAAAGAACAGTACATGAAGGTGTAAAGGCCTTcaaatgtca
agaatgtggtaaatgttttTCTACAAAGAGTAATTTGAAAAAGCATCAAA
GAACAGTCCATGAGAAATCTTTTGAGTgtcagaaatttgaaaagattttt
ggaaagaaatgttcgttaaagaaacatcaaagaattttgaatttcattgg
AGTGAAAAGTCATTGATGTGGTAGgtctttctttctttcgttCACAGACA
CGTCAAAAGGTTCAAGAAGGATTGAATCTTTCAATGTGTGAAAATTGTTG
CAAATTTAATTGAAGATAACCAAGGAGCAGGCTATTAGCGATGGAGGGTT
TTATTATCTTTaagtatcaaaatttttaactttcatCCACAGACACGTCG
AAAGGAAGTTCAAGAAGGATTGAATGTTTCAATGTGTGAAAACTGTTGCA
AATTTAATTAAAGATAAAGAGCTACCTTCGGTGCCTTTTTACCTTgtaaa
ttcgaatatttcttgaAAAACACTCAAATTTTCAAGCTAACTTTTCTCCT
AATTGTCCTTTTATTGGGTCAATGTTTCTAAAtcataaaagttatttttt
tacaagGGACAGTCTTAAAGTGATGTCAAGACAGGCACCAAAGAACTTTC
ATCAAGGtgtaaaagcttttcaatgtcaagaatgtggtaaatcatTTGGA
CATAATTCGGTCCTAATAACTTCGCATCAAAGAACAGTCCATGAGACAAG
CTTTTTGAGTGTCAGAAATGTTGAAAACCTTTTTGGAGAGAAATGTTCGT
TAAAGAAACATGAAAGAATTTATAAATTTCAttggtttgaaaaaagtcat
tgatgtggtatatatttttctaacttttatccACAGACACGTCGAAAGGA
AGTTCAAGAAGGattgaatttttcaatgtttgaaaaGTGTTGCAAATTTA
ATTGAAGATAACCAAAGGAGCAGGCTATTAGCGATGGGGGCGTTTTATTA
TctttaaatatcaaaatttcaacgAATCTTGTCATTGATAACGAGCTACT
GTGCCTTCAACGGAACTTTCTACtggaaaattgaaacaaatgaTCATATA
CTTACTGCCAACCTTTCTTGGAAACCCAGAAATTTATAATAAACCTGCCA
GTTGAAGCTGATTTTGTCCTAATGAGCCTTCTTTCCATATTTAGACAGAC
TTTAGTGTTGTTATGGTTTTGCTTATATGCGTGTGATTActtcttttcat
ctttttgcTAGTTCTTGTATATTACAAGATGGAATAAAGTATTCTGAAGT
AAAGAATTAAGGgctgtcattttttaaatttcttcaaCAATTTTACTTAA
CACTTCTTTAGACATTTTC Coding sequence (CDS) from alignment at sc0000134_pilon:738951..748569+ >MSTRG.15329.4.p1 ID=MSTRG.15329.4.p1|Name=MSTRG.15329.4.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1638bp|location=Sequence derived from alignment at sc0000134_pilon:738951..748569+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaatgaaattgaagaaatgaaaataaagactgaacaagaagaagaTCA
TGGTTGTTATGAAACGAATCATGAACATTTGGAAATCATTATCAAACTGG
AAGATGAATCAATTGGATATCCAGACGACGAAATTTTTGAACCATTAAAA
AACCATGAAAGTGAACTATTTAAAAGTTCTTCTAGAAATGTAAATGTGAA
CGATGTTACGTCACCCAAAGAAACAAACCCACAATATTATGAAATAACCA
TTAAACTTGAAGATGAGTCAAAACCTAAAGATGGTAAAGATCAAAGTGCA
CAGTTAATGgatattttggaaaatcaaaattccGTAAATATTAACGATGG
AACAAATTGTTTTGAACAGTTTTCACCGATTGAAGAAATTAATTCACAGA
TCGGAGAGGAAATCACTattaaatttgaagatgaattgcaaaattttcaa
agcaatgaaaatgaaagtctaCATGCAATTATAAAGGCATTTGAGTGTCA
GGAATGTGGTGAATCTTTTGCTACAAAGAGAAATTTGGTGATGCATCAAG
TAACAGTCCATGAGGGAATAAATCCTTTTGagtgtcaagaatgtggtaag
tCTTTCGGAAAGAAATCGAACTTAACTTTACACCAACTAACTGTCCATCA
AGGTATAAAGGCCTTTACATGTGAAGAATCTGGTAAATCCTTTGGACAGA
AAGCGAACTTAACTTCTCATCAAAGAACTGTTCATGGAGGTGTAAAGCCT
TTTCAATGTCAAGAATTTGGTAAAACTTTTGGACAGAAAGCGAACTTAAC
TTCTCACCAAAAAACTGTTCATCAAGGTATTAAGGCCTTTAAATGTCAAG
AATGTAGTAAATGTTTCGCAGAGAAATCTTTTCGACGCAAGACGACCTTA
ACTTCTCACCAAAAAACTGTTCATGAAAGTGTAAAGGCCTTcaaatgtca
agaatgtggtaacTGtttttttACAGAGATTAATTTGAAAAGGCATCAAA
AAACGGTCCATCAGGGTGTAAAAGCCTTTAAATGTCAAGAATGTAGTAAA
TGTTTTgcagagaaaaaaaacttaacttCTCATCAAAGAACAGTCCATCA
AGGTATGAAACCATTTTtgtgtcaagaatgtggtaaatcttttgggCAGA
GAACAAACTTAACTTCTCATCAAAGAACTGTTCATGAAGGTGTAAAGGCC
TTTAAATGCCAAGAATGTGATAAGTCTTTTACGAGAAAAAGCAATTTGAA
GGTGCATCAAAAAACGGTCCATCAAGGTGTAAAAGCCTTTAAATGTCAAG
AATGTAGTAAATGTTTTGGACAAAATACAGACTTAACTTCTCATCAAAGA
ACAGTCCATCAAGGTATGAAACCATTTTTGTgccaagaatgtggtaaatc
atTTGGGAAGAAAACAAACCTAACTTCTCACCAAAGAACAGTACATGAAG
GTGTAAAGGCCTTcaaatgtcaagaatgtggtaaatgttttTCTACAAAG
AGTAATTTGAAAAAGCATCAAAGAACAGTCCATGAGAAATCTTTTGAGTg
tcagaaatttgaaaagatttttggaaagaaatgttcgttaaagaaacatc
aaagaattttgaatttcattggAGTGAAAAGTCATTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000134_pilon | genome | sc0000134_pilon:738951..748569 + |
|
