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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000007_pilon:1379645..1387647+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.1529.4.p2 ID=MSTRG.1529.4.p2|Name=MSTRG.1529.4.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=8003bp|location=Sequence derived from alignment at sc0000007_pilon:1379645..1387647+ (Clytia hemisphaerica_ch_hm2_pilon)
ttttagtgtaaaaaagtaaagggacaaaaaagaaaagttacGGTATAATC
GAATAAGAGATGGCGGCACACATGGAGCGATTCAAGTTGTTGGTGGTCGG
TGATTGCGGTGTGGGCAAATCTTCTTTTGTTTGTGGCGTGGTTCATCAAA
CACCCTTGCAAAACGCCCCTTCTACCATTGGATGCAACGTAGAAGTGTTA
CCTTACAGTTACGATGACAATGGACGACAACGGGATGTATTTTTGGAGTT
TTGGGATGTTGGCGGATCATCTGGTCATCGTAACAGTCGTAGCATCTTTT
ATAATAACATCGATGGTTTGATTGTTGTGCATGATTTATCAaacagaaaa
tcctttttaaatttacaaaaatgggTTGGGGAAACATTCAACTCAAACCG
TCAGGAATTCACGGGCATCACGGTTTCAGGGAGCGATGGTTCACAATATA
ATGATGACGAGTGTGATGCAATTTCCCATGGAGGTGGTAGAAAGTCAACT
ACCAATATCCCAGTGTTAGTGTTGGGCACAAAGGAAGACCAATGCAACAA
TGCAGGAGAGCAGAAACGAAATGCGCACCATATTGGATTGTCTAATGATA
GTGACGTCATCTTCTGTTCCATGAACTGTCTACAAGAGGGGCAACTCCAA
AAGAACAGTAATAAATGGCAGTCTTTGCATGCCTTCTTTCATAAAGTAAT
TGATGTTCGGTTGAATGGTGCAACACGTCGAAATACGAACCTCGAAAGTA
ATTCCGAGTTTAGAGGCCGAAAGAAGATTTACTGATTTGCTTCAAAGAGC
GATTTGAGAAGATTCAGACTTATTACTTGATAATAATTTATTATACTTTT
TAGATTTCAACAGAATTATTTAAATGATATAAATGCCTTGTTATAATTCA
CCATTAATTTGTTTCGATTTTTCTGACCCTTGAAGCTCTACAGATTGAAA
CTCAAATCGTATTTCTTGTTTAGGTGAGAAAAATAGTAATACAAAATAAT
GAGCACGCTGGAGGATAAACCTGAAGATGAGAAAACCAAAGAACTGTCAG
TTGCACAGAAGGTCCGTATGGAGCGCAACCGCCAGCGTGCCTTGTTGCTC
CGTTCTTCAAGGTTAACAAGTCACCCATATGCCAGTGAGGAGGCGAAGAC
AGTGCACGTAGGAGGGTCAAGTGTCGTGGATAGTGGTGGAGGTTTCTTCA
tcgatgaagatgaaaatgaagaagaagaaatggtCAACGCGGCTGACTTG
CCCAAACAACCTGGTAAGTTTTCTCACTGGTTAACTCTCCCTTTCGCATC
ACAACCAGACACAATAACACACAGGTGTCAGAAATATAAATACTATGCTT
GAAATTATACAATTTAGCCgttgtcttattttttaatttgaccTGCTTTT
TTAAGAGAAACTGCGATTATACATTATTCATCTTTATATTTTAGGTCCTA
TCATAGATGGTAGTGAAGATCTGTGTGAAGATTGTCACAAGAAATTTTCC
GACTCCTATTTGTTGAAACATTTTGATGTTCAAGTTTGTGATGCGTGTAG
GTTAGTTTGCTTTGTTATCTTTACTTGATTCTAGATTCCAAAATTTATCT
TAATAATATCTTAGAGTTAAGTCCAAAGCACGTGGGCACGGGTTGATTAC
CAATTTGTTctagtaaatgaaaaaagaaacgtCTCTAAGAGAAGTAAATT
CCTTTTCTCTTTATGATTTATAAAACAGTAATTTCTGATCTGCGAGGGAt
ttttttGACTAGAGTTGTAAAAATCCATGCGTAATCTATCGAATTTTTCG
ATTATCGAATtaatcgaaactaatcgaagCTAATCGAAGCCATTATATTT
CGATTAGTCGAAATAATCGAAGcctaatcgaactaattgagataaaaaaa
accttggaaaattcgattaattcgataaATTTGATTGGGCTTCGATTAGC
TTCGATTATCACTCGATTAGTTTCGATTATCcttcgattagtttcgatta
TCCTTGAATTAGTTTCGATTATCCTTCGATAAGCTTCGATAAGTTCTATT
CCCCAATCTTCTTTTTTGGATTCATGTCCCATTCATGTTCAATGGATGGT
CCGCTCAACGAtgtgtaaagcccgaagggctagatctctagcttttgctg
aaaattgtGTCGAAGTTAGATAGGAAATCCTaactaagtcacgtgacatt
ataatagaatttcagcgcttgaccaatcagaagcttagCCAATTTTCGGA
AACAATAGCAGAAATACTTTTTCCAATATGtactcactttttttcttgct
taaCCTGAGAACAGATTGtaattgttttctgcccaccacgctgaagctct
aaagggatgggcgaaaacaaacaatctgacgactTTGTTGGACGGATTCA
TGCGAGACCGCGTTCAAAACATCCTGGAAACTAGCGACACcgcttcaaaa
tttgttttgattttgctgcAAAGGATTATGGGTAGATTATTTTTGATAGA
TTTGGCGGGTGAGAAATGGCTCAAATGGGGACCCGTTTTTACAACGAGCA
CCTTGTTGTAAAACTTTCAAAGCGGTATGGCCAATGTCCACAGATGTATA
TTTCGCATCGTACCtttagagcaaagcgtgtcgatAGCGAAATTCACATC
TGGAGCAGGTAATTtcttgcttggaagagcttgaAGCACGAgatttagcc
cttcgggctttacagaaatctgtgggtccgctcctttagagctttaccta
tcaggggggagggggtcggGCTCAAAATCGGTGAAACGATAAGGCATCCT
GGATGACCGTCCGGCCGTCACACGAACCATTCGGCCGTTTAACCGAAACG
AGCAGCCGGCCGTCGAACCGAGCATCAGGCCGCCGTACCGAGCATCCGGC
CGTCGAACTGAACCTCCGGCCATCGAACCAAGCACCTGGCCGCCGGAGCG
TGCGGCCGCTAGCCcgcggggtccacttaaagcttttttatagacttgcT
TAggtggactgtaaaacagtcctgtagattttagttgtttttggaaggta
agaACAGgataaagcaatgtttttatttgcaATACGGTATTGCAAATCTG
CTGCTGGTattgatattgatgatataGATGCTTCTCATTTTTAAACTCCA
AGtgctccaagtagtttttttgtgaattggatttttagtgtttttcttaa
aaaatggcgacctcgtcaaatgctcctagtctacttcactggactcagcg
tcatatcCATTGCGGTAATCTCATAACAGAACACGAATATTCTGCAGGCG
TCAGACGCGggaaaaactttgaagatagaaaataaagaaatttatcATTT
TGGTACTTTGCATCATACTTACACGGTGTAAAAATGGACAAACTAAATTA
AAATAcagcaagttgataaaaacaTAATGTGTAAGACTTTTAAATTTATA
TAACTTGTAACTGTAAAATAAAAGCCGAAGTTGGCAACcttcataaataa
aaaataaaaatgttggtTGATTCAGGTTGATTTgacttgaaaaagattga
agtGCCCAAGGTTATatgcttaaaaaaataaaaaaaatgtctaTTTACGC
GATTCTGCCTCCCGTAGTAAAGCAATCAAACTTTTCTTTGATGCGTTTTT
GCGAAACTTAATGTTCATAGAGATCAGTTTGAGTTTCATGAGCTGAACAT
CCATTTGCTCGTTGTCTGTATTTTTTGGGGGGACAGCGGCTGTAGCTTTT
GATGCTAACatgtcatttttctttttttctagagCATCCAAGTCCGTTTG
TCCTAGATGTCCGTCGAACCTTTGCACCAACTCAACCCCTTTGAACATTT
AATATGTGATTGATTTCGTTGGTTCTAGTGTTGGTGAAGGAGCATTTGAT
GACAGAGAAAGACACCGAACaaaaaaactgatatttttcaaattgctaAT
TTCAGCCTCGACAGCTGAATGAGCTGTTTTTGTACCGTACCGACGAATAA
TTCGAACAACTTTACCATATGTAAATTGACGCGATTTTGTGTCTAAGAAA
CAGCATTCATCGTTGATTTTGATGTTGGTTTCGAGCGTTGAGGTGTTGTT
ATTGAGCTGCTCAAAAAACGAGGTTTGGTTACTTGATTTCCATCTTTCCA
TTCTGCTCGCAGCTGGGCAATAAATTTTGCCGTCAGTCAGAGACAGAAAT
CGAGCAATATGATAGACTGTACCCTCGTATTCTACATACATTGGGTTTGA
GCGGTTTGttcgatttgttgattttcttgtgTTGGCATTTGATCCTTGGT
CCAGGAGATCTTTCATAGTTAAATTGGAATCATTCGCTAAGCAGTTGGTG
CTTCAAGAGGTATATCCGTTCTAGAAATGAAACAACACAGCATTGAAAGT
TGAATGTTACCTCTCGACCCAGtggtaaaaaaacaaacaaaagaaatgga
aatacagtcaagcaaactactgaaatacgataaaaaataatGGACTTTCC
TCGCTTTCCTAACCCTGCTGGAAGAAATGCAACCCAGCTCGAAAAAACTT
TCATCACATGTTATGAAACCCATTACTAGTAACAATATTGATTGAATAGT
TTGAagatagtttgttcttatataaaaaaacgtgtatgaattTTTGGGAC
ACTGTAAAGTTTTTCGGGATTCCTTATAGTTAATATATATCAGCACAGTC
TTTTGGCATGTTTCTTGCAAGTGTGCTTTTTGACTAGAGTAGGCCAAGTT
CTGTAAAACCGGGGTATAcatcttttatttcaatttctcacCCGGGTTGA
GATTATTCAGCTTCAATTTTCTGGGGTGGCTGGGTGATTTCTTCCCTCGA
ATAGGCAAACACAAATTATTCTGCCATAGAATGTAAAGATTTTTAAGCAC
CACACAAAACCATAGAACGACGACGAGGGACCGATAACAAACACCAAAAT
GTTCATCACCAGGCTCGGAAGGTAAAAAGATCTTTCACGGCTATCAGATT
TTAACCAAATTTGACCCGATAATACCTTGAGGGaagaaatttaatttcac
ggttGAGAGAATTTTCTGTTCAAAATATGGcttattttgccctaaaaata
ccaattttcgggtaatttctttcaatcataaaaatatttgtgtttcccGG
ATTTGCCAAAAAAcagcgaaattaaattctgctaaaatttcttcccgcca
aaaatttcttcccttaaggtattccAAAATCTCCTATTTATTGCACGTAT
TGGCCTTAATATTACGGTCGAATTTTAATCGAAAAGTCATTGCTATCAAG
TAAAAGCTGTTGAGTATTGCTTCAACGGTCGTACTTAGCATAAATCTTCT
GATTTCTGCATTGCCTTAAATTGCCACGGCACTCCTTTCCAATGCGAATC
GTAGACTAGAAAGAAATAGAGAAAGATGTCACAATATAGCGTGCTTGACT
ATCACCACACATGAGTATGATTACtgtacgtgatttggaaatttcctCTA
ACAAATCGAGCTTCAGGCCCCAGTCATCCCTGAGTTGACGATAGGTTTTT
ATCCCAATTTAAAATCACCGAGGAACCAAATCGTGGAAAGTTCTGTGGTT
CACACATTCATCACATTTTTTCACGATCGGCTTACGACGGTTCGTCTGTT
CACTTGTCAAGCGCCCTTTTAAAAATGAGTGATTTGCCGCCTGCTGAAAC
GCCTGCAGAAAAACAAGCCAAACCTAATCAGAACGAAGAGAAGCGCGGTG
AATGTTCCGAATGTTATATATTATTTTCCATTGCGTCTTCGATGTTTTGT
TCTCTTCGATTGAAgtctaaaaaaagagaaaatatgatAAAGATCAAACA
TTAATCAAAGCTATCGAACACTTATCGAAGCTTATCGAAGATTATCGAAT
CTTAATCGAAACCTATCGAAAGTTAATCGAAGttatcgaacataatcgaa
tatatCGATATTAATCGAAGCTATCGAACATTAATCGAAGCTTATCGATA
Gctaatcgaagtaatcgaatggtaatcgaactaattgagaaaaaccttgg
aaaattcgattaattcgattacgGCTCGATAGTTTCGATAAATTCGATTT
AAAATCGaattcgattttgttcgatagATTACGCCTGGACTACACTAACG
GACTTTACATACATTTTATCTGAATTCTACCAAAAGTTAACCAATCGAGA
CGCAACCTTTGCTTTCATTTTAGAAGTTTGCAGAAAGACGAAGCGTACAA
AATGATTACAAAGACTGATGCAAGACAGgtatttacaattttcatgtgtc
tttttttgcttttcgTTGCCCTCTCTCGAGGTTATCAGCTTTTTGCAGTA
TATTAATTTGAAACCTATTAACCAATATTCCGtctcaattttagaaattt
tgtctGAAAGATTGCGATTTCGACATTCGAGAGCCTCCATTGAAGTTCAT
cgttcgcaaaaatcctcataATGATCGCTGGGGTGACATGAAGTTGTACC
TGGAACTGCAGGTGAAACCTTTCTTTGCGTAAACTCCAATAAAATTCCAA
ACAGAAAGAACTAGAAAGCGACAATAAAACTTGCATATTTTGCACCGTAT
AATGCcgtaaaaaattaataaaagagATACACAAACAGAAACTAGTGAAA
ATTAATCAATTACACCGATAATTTGGAATTCTATTTTGTTATTCATTCTA
ACTTTCTCATTTTGTATCAGGTTCACAAACGCGCCATGGAGGTCTGGGGT
GACGAAGAGACACTGGAGGagcaaaaagaaaagagaactgataataaaga
aaaagctaaaaggaaaaaatatgaaaaacgaATCAAAGGTTTGTGACAGA
ggttatacatgtttttttagaaGCATTGTTGCATAAAAATTTTAAGCATA
TCCTAAGCATTATCTGAGCCTATATTATCCGGCTGGAATTTACCTTAAAT
TTTGCTTAGTTcgagcaattttcagccttgtcaATCTCTTGATCTAAGCA
TCTCCCAGccagtttttgaatttttgtatgcttatacaAAACTTGTGCTT
TTGGTAACCTCATTTGGTGGCTTTCATTGATTGAGCCGTCAACTCGTTTT
CAACTTGTCAACTCCTACTGGAGTCTTTTTCATGCTTTACGAATATGTTA
GGGGTTAAATGACATGATGATTAATGTGACGGGGAAGTATTGGATACATT
AAACTGTACTTGACGTTCTTCAACAGTTTGCCCTACCGTTCTCTACTTTT
TCGTAAATTGGGCAGTTTCAAGAAAACACCATTACTTCTGTGGACGActg
gggaaattttgaaaaggttCCGGAAGATGCAGGATTTTCCTAATTATTTG
GTCATCCGCATCAAAAAGATCTTGAATGTTACGGAAATCATaaagttttt
cataatttaGTTGTTAcggaaaatccattttttccaCAGGGGGGTAACGG
ACTATAACTGGAACCACCCATTTAGCCTAGACTACCAAGTCTTCTGATAG
AATTATTGTTTACCATATTATTCTCTATCGGATGTAGAACTTCGAAAAGC
AGTACGTACAAGCACTTGGCAGAAGGACTTGTCGAAGCACGTGCACGACT
ATGATTCTGCGAACGAGGTTTACGATGAAGAAGAGGACGTCTATACAAAG
AAGTGTAAAACATGTGATCATCAAATTACTTACGAGAAGATGTGAGAAAG
AAATATCCCattgtcaaaagaaaaaagtaatccTCGCAAACAGGTACACC
CCTGTACTTGCTTTCCGGGACAAAAGTATTCCCGAGAGTATATTTTTATT
AGGAAATTGGTACCCTCTACAGGAGATTGATATCGAGTGAACTCTTTCCT
AAGCTGTGTCGTCATGTTATAGTCCAAATAATATTCTCAGAATTACTGGG
GAAACGCTGACTTTCTTTGTTCGTAAAGAATGGACATATTCGTCGTGCAA
AGGTAAAGGTACATTTGATGGGTGGTTATTCCACTAAAATGATTGGACTC
ACT Coding sequence (CDS) from alignment at sc0000007_pilon:1379645..1387647+ >MSTRG.1529.4.p2 ID=MSTRG.1529.4.p2|Name=MSTRG.1529.4.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=726bp|location=Sequence derived from alignment at sc0000007_pilon:1379645..1387647+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCGGCACACATGGAGCGATTCAAGTTGTTGGTGGTCGGTGATTGCGG
TGTGGGCAAATCTTCTTTTGTTTGTGGCGTGGTTCATCAAACACCCTTGC
AAAACGCCCCTTCTACCATTGGATGCAACGTAGAAGTGTTACCTTACAGT
TACGATGACAATGGACGACAACGGGATGTATTTTTGGAGTTTTGGGATGT
TGGCGGATCATCTGGTCATCGTAACAGTCGTAGCATCTTTTATAATAACA
TCGATGGTTTGATTGTTGTGCATGATTTATCAaacagaaaatccttttta
aatttacaaaaatgggTTGGGGAAACATTCAACTCAAACCGTCAGGAATT
CACGGGCATCACGGTTTCAGGGAGCGATGGTTCACAATATAATGATGACG
AGTGTGATGCAATTTCCCATGGAGGTGGTAGAAAGTCAACTACCAATATC
CCAGTGTTAGTGTTGGGCACAAAGGAAGACCAATGCAACAATGCAGGAGA
GCAGAAACGAAATGCGCACCATATTGGATTGTCTAATGATAGTGACGTCA
TCTTCTGTTCCATGAACTGTCTACAAGAGGGGCAACTCCAAAAGAACAGT
AATAAATGGCAGTCTTTGCATGCCTTCTTTCATAAAGTAATTGATGTTCG
GTTGAATGGTGCAACACGTCGAAATACGAACCTCGAAAGTAATTCCGAGT
TTAGAGGCCGAAAGAAGATTTACTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000007_pilon | genome | sc0000007_pilon:1379645..1387647 + |
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