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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000007_pilon:1376687..1379566+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.1529.2.p1 ID=MSTRG.1529.2.p1|Name=MSTRG.1529.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2880bp|location=Sequence derived from alignment at sc0000007_pilon:1376687..1379566+ (Clytia hemisphaerica_ch_hm2_pilon)
TTTTAGAAAGGttataaaatgaaagaataagTAAAAATGTCTTGAAAGAA
ATTACCATCACCATAACGACATGTTCAATAACAAGATCCGTCTGCTCATA
CCTAACCATCGCACCATCATCGAAAACAACAAAAGCTTCACggtaaaata
aaattgttttttgtggCTGGCTAATTACAGTGcagtctctttaattcgaa
ccttttataactcgaacctctttaaACCGAttgtttccttaactcgaaca
agttttctgttCCCTTCCGttattaacaatgccttataaaccttactcca
taactcgaacaaatttgtgttccccgtgcgtgtttgagttatggagccTC
TACTGTAATGTGCTCTGAGCCCCTCCccggttattaatttttgatttcga
CCCCTGGACCTTTTTAAGACCCCCATTaaagaattttggaaaatatttcc
aGCTATCGATAAAaaagccccttattttgctgtaaatagGCAGGTTTCAG
TCTATCATTACCTTATGTCGGAGTATTTTGGAGGTAAATCTTAGAAACCC
GTCAATTAGCACCAGCCCCCTCCCCGACAAAGTTGaaaaaaaGCAATCCG
TAGAgaaacaattttgtaaaatgtcCTTTAATTATGAGACTCTTTCCTGG
TTTAGACTTATCTTAGAGTCTTTTGATATGAAGGAAAAGACCTTATCATC
CGCATTCACCATGTAAAGTTAACCATACTTCTTTAATCGTTTTACTCGAC
TTATGTTATCCCTTTAGGTTTACTGCGTGGAAGTTGTTTGCGACGGCAAA
GTAACCAATGTTGAACATCGATACAGCGAGTTCTATGAACTGTACAGAAa
ggtaaaacaaaaatttttcaaacatatCTTCCCAAAACATCGCAAGTCtc
caaacttttaaattttaataaagaTCTAATCTGAAAGTCAAAGTCCTATG
GTTTCTGAAAATACCATATTTCCATTATTTCCCAGTGTACCTAATACTAC
TTTTCAAGCTTTCAAAGATGATCGCAGGAAAGATTGTCTTTCCACCCAAA
CGATTATTGAATAATAAAGATGTCAAGTTGATTGAAGCCAGAAGGAAAGG
TCTCCAACAATACTTACAGGTAACTCACAAAAGCCTCGTTGGTCAAGCTG
TTCTCCTAGTTATTGTATTTTGCTAACCCAGAACCCCCTATAAGACTACG
ATACGCACTTATACTTAACAGACTTTAGTTCATCTGGTAGGCGAATGAGg
gagaaaattcgaaaaaacttCCAAACCTCTACTACTCGAATGTCTCAATA
ACTCGAACGGTTTCCTTCCCCTGGGCCTGACTGTATTCGCGGTGATAAAC
CACCTAGTTTAAAATTGTTAATCAAATGATCAATGaataattgaatattt
ttgtttgactTTTGTTTGACTTTGTATCTATCTTCGCAGACGGTTTTGTA
CACGTTTCAAGACAACGTACCACCTCGTTTGTTGGATTTTCTCGGTATCC
CTGATTATTATGATCAACAATACGATAATAATTTGTGAGTATAACCTTCC
TAACATTTACTGGAAAACCATTTTGGCAACATCGGCCACTCATAAGTAAT
TATTCTGTTGCAAAATAGGCAAAATAAAAACTGAGTAAGAATCAAATTGC
ACCCGTGTAAATCTCATAACATCGGACTCTAAAGCCTAaccttgttttct
tgttttcctTACGTTAACAGCACGACTGACGAGTTGAATTCATCCTTGGA
TGGTGACCAGAAGTAAGAATGTTTGCTGCACCTCATTTTGTGACTGActc
tttctttttgtcattccctacttttaggttccaaataaacgcccccctgc
ttgttaatgttttcagctgtcaacgagaaggccccttattttgctctaaa
tagcctgattttgacctatatttaccttatttttgggttttcagaagtac
aattttcaacccccccccgaCAATtaggggggcccgtttattaaaatctt
gaaaattttccaccccccctcccccGCCAGTTTATTTGGAACTTTTAAGA
GTACTTGATGCtcgttaaaattattttttttgcctgaacaTCTTTTTATT
TCGTTCTGTATTcgattcattgttttttttcagtggacaTGACAATACAT
TTTCTGCAACCCAAAATATGATTTGCTTTCGTAAGGATGCGTTCCTTGTT
CCAACGCTAAAAGGTACAATTCTAGATTTTGTAGATATAaaccagcggcc
gaggtagtgaataGTGTCACTTCGTAGGACACCCCTTAGATCATAATTTC
ACACCCTATTAAATTGGCACGGAATTCTTACATTCAAAATCTTCGATACA
TTTGACCAAGATATGTTAGCAATATAGATGACCAGAGTTTCAACGAAGTG
TATCAAAGAGGAAAAACAGTCTTGAAATCAAACTAAGGCTCCTGAAATTC
TGAAGGacgaaagttttctttttcgcTCAACCATCATCATATCTCAATAT
CTTTCTAGTTCGTAATATCAGCTACAAACAACAAATTACTGTTAACATCG
TTTTAAGGCATTTCCAGCCTACAATCTTGCTTAAACCTTTGCTTTAACTT
CTCTTCTTCGCAAAGTTAATAAATAAAAAGCGATTTCAGAGGATATGTTA
TGACCATTTACCTTACATTTTCACCTTTTCAGATTTGGAAGAAGAAAACA
CTCTTCCAGACATTATCAATAAAGGTTGTTTAGAGGGCATCTATGGATAA
TTTGCTGTGCAACCATTCCAAGATAAAATTGTAAATAGATTTTTTGATAT
AGtgaaatttgatatttgaatGATTACTTAGTAATAGATTATTATAATTA
CCTGTTTCCATTTTCCGATTTAAATGATTG Coding sequence (CDS) from alignment at sc0000007_pilon:1376687..1379566+ >MSTRG.1529.2.p1 ID=MSTRG.1529.2.p1|Name=MSTRG.1529.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2664bp|location=Sequence derived from alignment at sc0000007_pilon:1376687..1379566+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTCAATAACAAGATCCGTCTGCTCATACCTAACCATCGCACCATCAT
CGAAAACAACAAAAGCTTCACgGTTTACTGCGTGGAAGTTGTTTGCGACG
GCAAAGTAACCAATGTTGAACATCGATACAGCGAGTTCTATGAACTGTAC
AGAAagCTTTCAAAGATGATCGCAGGAAAGATTGTCTTTCCACCCAAACG
ATTATTGAATAATAAAGATGTCAAGTTGATTGAAGCCAGAAGGAAAGGTC
TCCAACAATACTTACAGACGGTTTTGTACACGTTTCAAGACAACGTACCA
CCTCGTTTGTTGGATTTTCTCGGTATCCCTGATTATTATGATCAACAATA
CGATAATAATTTCACGACTGACGAGTTGAATTCATCCTTGGATGGTGACC
AGAAATTTGGAAGAAGAAAACACTCTTCCAGACATTATCAATAAATGTTC
AATAACAAGATCCGTCTGCTCATACCTAACCATCGCACCATCATCGAAAA
CAACAAAAGCTTCACgGTTTACTGCGTGGAAGTTGTTTGCGACGGCAAAG
TAACCAATGTTGAACATCGATACAGCGAGTTCTATGAACTGTACAGAAag
CTTTCAAAGATGATCGCAGGAAAGATTGTCTTTCCACCCAAACGATTATT
GAATAATAAAGATGTCAAGTTGATTGAAGCCAGAAGGAAAGGTCTCCAAC
AATACTTACAGACGGTTTTGTACACGTTTCAAGACAACGTACCACCTCGT
TTGTTGGATTTTCTCGGTATCCCTGATTATTATGATCAACAATACGATAA
TAATTTCACGACTGACGAGTTGAATTCATCCTTGGATGGTGACCAGAAAT
TTGGAAGAAGAAAACACTCTTCCAGACATTATCAATAAATGTTCAATAAC
AAGATCCGTCTGCTCATACCTAACCATCGCACCATCATCGAAAACAACAA
AAGCTTCACgGTTTACTGCGTGGAAGTTGTTTGCGACGGCAAAGTAACCA
ATGTTGAACATCGATACAGCGAGTTCTATGAACTGTACAGAAagCTTTCA
AAGATGATCGCAGGAAAGATTGTCTTTCCACCCAAACGATTATTGAATAA
TAAAGATGTCAAGTTGATTGAAGCCAGAAGGAAAGGTCTCCAACAATACT
TACAGACGGTTTTGTACACGTTTCAAGACAACGTACCACCTCGTTTGTTG
GATTTTCTCGGTATCCCTGATTATTATGATCAACAATACGATAATAATTT
CACGACTGACGAGTTGAATTCATCCTTGGATGGTGACCAGAAATTTGGAA
GAAGAAAACACTCTTCCAGACATTATCAATAAATGTTCAATAACAAGATC
CGTCTGCTCATACCTAACCATCGCACCATCATCGAAAACAACAAAAGCTT
CACgGTTTACTGCGTGGAAGTTGTTTGCGACGGCAAAGTAACCAATGTTG
AACATCGATACAGCGAGTTCTATGAACTGTACAGAAagCTTTCAAAGATG
ATCGCAGGAAAGATTGTCTTTCCACCCAAACGATTATTGAATAATAAAGA
TGTCAAGTTGATTGAAGCCAGAAGGAAAGGTCTCCAACAATACTTACAGA
CGGTTTTGTACACGTTTCAAGACAACGTACCACCTCGTTTGTTGGATTTT
CTCGGTATCCCTGATTATTATGATCAACAATACGATAATAATTTCACGAC
TGACGAGTTGAATTCATCCTTGGATGGTGACCAGAAATTTGGAAGAAGAA
AACACTCTTCCAGACATTATCAATAAATGTTCAATAACAAGATCCGTCTG
CTCATACCTAACCATCGCACCATCATCGAAAACAACAAAAGCTTCACgGT
TTACTGCGTGGAAGTTGTTTGCGACGGCAAAGTAACCAATGTTGAACATC
GATACAGCGAGTTCTATGAACTGTACAGAAagCTTTCAAAGATGATCGCA
GGAAAGATTGTCTTTCCACCCAAACGATTATTGAATAATAAAGATGTCAA
GTTGATTGAAGCCAGAAGGAAAGGTCTCCAACAATACTTACAGACGGTTT
TGTACACGTTTCAAGACAACGTACCACCTCGTTTGTTGGATTTTCTCGGT
ATCCCTGATTATTATGATCAACAATACGATAATAATTTCACGACTGACGA
GTTGAATTCATCCTTGGATGGTGACCAGAAATTTGGAAGAAGAAAACACT
CTTCCAGACATTATCAATAAATGTTCAATAACAAGATCCGTCTGCTCATA
CCTAACCATCGCACCATCATCGAAAACAACAAAAGCTTCACgGTTTACTG
CGTGGAAGTTGTTTGCGACGGCAAAGTAACCAATGTTGAACATCGATACA
GCGAGTTCTATGAACTGTACAGAAagCTTTCAAAGATGATCGCAGGAAAG
ATTGTCTTTCCACCCAAACGATTATTGAATAATAAAGATGTCAAGTTGAT
TGAAGCCAGAAGGAAAGGTCTCCAACAATACTTACAGACGGTTTTGTACA
CGTTTCAAGACAACGTACCACCTCGTTTGTTGGATTTTCTCGGTATCCCT
GATTATTATGATCAACAATACGATAATAATTTCACGACTGACGAGTTGAA
TTCATCCTTGGATGGTGACCAGAAATTTGGAAGAAGAAAACACTCTTCCA
GACATTATCAATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000007_pilon | genome | sc0000007_pilon:1376687..1379566 + |
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