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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000133_pilon:585071..587095- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.15258.1.p1 ID=MSTRG.15258.1.p1|Name=MSTRG.15258.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2025bp|location=Sequence derived from alignment at sc0000133_pilon:585071..587095- (Clytia hemisphaerica_ch_hm2_pilon)
CTATTTATCAGTGTAATGTATAAACTATGGTTATAGGAATTTAAAAAAGT
CTCAAACATCAACAAGCTTAAAGTCAAAGATATCAATAATCAAACAGAAT
TAGTGTACTGTAAGGCATACAATTATTGGCTATTCAAGCCATGGCATCAG
GTAAATATATTATTATTTATTTTTGTAAATGAAGTAAGAAATTTTTATCT
TTATTACTATCATATGGAACAAAATATAATATGAAATCAAAAAGTAATAA
GAAATTTATATATTATCTTGACCCTTATATTGAAAGTGATTTTAAAGTTA
TTATTTGGGCTTTTTTGGACAATAAAAATTTATTAAAAAGTGTCTTCTTG
TTTACCAAAAACAGTTATTTAATCTGCTTTTTTTTAAGCGATTTACTTGT
CATTTTTTCAAGGTTCTACTACATCTGACACCAATAAAATCATGCAATCA
GATGACTGGACTGTACCGGGTAAAGCCTTTTTTGTATTTGTACTCTCATA
GCATAATTTATCGGGTTGAATTTGTCAAAAAAAAAATTCATTTTTTTGTT
TTATCATTTTATTATGCTTTCACAAGAAGCTTAAGACATGAAGTTCAAGT
ATAATTAGTTTTTACAAAGGATTGACTACAACTAGTACAAAAATGCAATA
ATTGTTTGGTTGTAGTGATATCTTTGACAAGTTTTCCCAAAATATTTTGC
AGCAATTTTGTATATACCATGAAGAACCTTTTTATTTTATATACCTTTAG
GACCTTCTACAGCATCTATGCCAGCTACTGATACAGAAAGATCAATAAAT
TCTACGTTTTGGGAAGGTATTCTAATTGTAATTATTTTTCAGTCATTTTT
TTTATGTGCATTGTTGCCTCTTACTTTGTTACTTTTACCTTTTTGTACAT
TCCGTTTAATTGGGTCTTCTCTTATTTTGTTTAGATATCAATGAATCAAC
TTCTAATGCCTTCGACAAGATTATCAAGACCAGCGAGGCGTGCTACCTTA
TCCATTCTATTGATGTTATCTTGGAAGCAGCTTCCCACGAAAGCCATTTG
AGTCTGCTCTCATGTGAACAAAGCCTACTTAATCTGGCTAGTTCAAATGA
AACAGCAGGCATATTTTTTGCATGTTCATTCGAGTTAACCAACGAAAACA
TGGTTATCACACGCTATTTTGAGCATGGTTGCTATTCCGGATACTTCAGG
TAGCTCTTGAATGCTTTATAAATAAGTAAATTTCACGTAATGGTTTAGTC
ATTTTGGCAACTCCAATAATTCTGGAAAGTAATTTAATGTTTCTTCACCT
AAACTCAGTCAATCGACAGCAATCGTGAACTGGCCAATCATTGTACATTA
AAATGAACATAATTTACACCTTTTACTTCAGAAAATATGGCGAAACCTTG
GTCAATAACAAACTTGGGTGTACTTCATTATCGTTAAAAACGTTTAACGG
AGCAGATATTACGAACGAGGAAATGAGAAGCAGTATGAAACGACAGAAAT
TGAAATCGAAAGGTATGCAAAACAGAAAATAAAAATTTTAAATTCGTGTA
CTTGGGTTTTTTTGTTTATACGAATCATTTGATACTTTTGTCATAATATT
TTAGGTTAAAAAACTTTTGATGGACTTTCATTGGCTTCATAAATCGTGAT
CATAATCACAATCGCACCGAAGGAAGTACAATTCTTATTAGTATATTGAG
CCTAATTATAGTACCTAATTTTTTTTCACAGGAAATTCAAGGCAGCGAGG
CTATTACTCTAATAACTTAAGGACCAACAAATCGAGCGTGGTGAACTCTT
TGAAAACTCTATTAACAGAGCTAGACGCCAGAGCTGAAATTAAACCTTTG
GGTTGTATAGTATTGGTCGATAAAGCAACGACTAAAACTAACGATTCTGA
CAACAGGTAATGTCTCCATTCATTATGTTTCTAGGTTTAACATTTTTTTT
TGACAGATTGACAAAAAAACAGAGACAAAATACTTATTTTACTTTCTTAC
GACGGTTCCGAAGTGTCACTGTTTC Coding sequence (CDS) from alignment at sc0000133_pilon:585071..587095- >MSTRG.15258.1.p1 ID=MSTRG.15258.1.p1|Name=MSTRG.15258.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4248bp|location=Sequence derived from alignment at sc0000133_pilon:585071..587095- (Clytia hemisphaerica_ch_hm2_pilon)
GAAATTCAAGGCAGCGAGGCTATTACTCTAATAACTTAAGGACCAACAAA
TCGAGCGTGGTGAACTCTTTGAAAACTCTATTAACAGAGCTAGACGCCAG
AGCTGAAATTAAACCTTTGGGTTGTATAGTATTGGTCGATAAAGCAACGA
CTAAAACTAACGATTCTGACAACAGGTAAAAAATATGGCGAAACCTTGGT
CAATAACAAACTTGGGTGTACTTCATTATCGTTAAAAACGTTTAACGGAG
CAGATATTACGAACGAGGAAATGAGAAGCAGTATGAAACGACAGAAATTG
AAATCGAAAGATATCAATGAATCAACTTCTAATGCCTTCGACAAGATTAT
CAAGACCAGCGAGGCGTGCTACCTTATCCATTCTATTGATGTTATCTTGG
AAGCAGCTTCCCACGAAAGCCATTTGAGTCTGCTCTCATGTGAACAAAGC
CTACTTAATCTGGCTAGTTCAAATGAAACAGCAGGCATATTTTTTGCATG
TTCATTCGAGTTAACCAACGAAAACATGGTTATCACACGCTATTTTGAGC
ATGGTTGCTATTCCGGATACTTCAGGACCTTCTACAGCATCTATGCCAGC
TACTGATACAGAAAGATCAATAAATTCTACGTTTTGGGAAGGTTCTACTA
CATCTGACACCAATAAAATCATGCAATCAGATGACTGGACTGTACCGGAT
GGCATCAGGAAATTCAAGGCAGCGAGGCTATTACTCTAATAACTTAAGGA
CCAACAAATCGAGCGTGGTGAACTCTTTGAAAACTCTATTAACAGAGCTA
GACGCCAGAGCTGAAATTAAACCTTTGGGTTGTATAGTATTGGTCGATAA
AGCAACGACTAAAACTAACGATTCTGACAACAGGTAAAAAATATGGCGAA
ACCTTGGTCAATAACAAACTTGGGTGTACTTCATTATCGTTAAAAACGTT
TAACGGAGCAGATATTACGAACGAGGAAATGAGAAGCAGTATGAAACGAC
AGAAATTGAAATCGAAAGATATCAATGAATCAACTTCTAATGCCTTCGAC
AAGATTATCAAGACCAGCGAGGCGTGCTACCTTATCCATTCTATTGATGT
TATCTTGGAAGCAGCTTCCCACGAAAGCCATTTGAGTCTGCTCTCATGTG
AACAAAGCCTACTTAATCTGGCTAGTTCAAATGAAACAGCAGGCATATTT
TTTGCATGTTCATTCGAGTTAACCAACGAAAACATGGTTATCACACGCTA
TTTTGAGCATGGTTGCTATTCCGGATACTTCAGGACCTTCTACAGCATCT
ATGCCAGCTACTGATACAGAAAGATCAATAAATTCTACGTTTTGGGAAGG
TTCTACTACATCTGACACCAATAAAATCATGCAATCAGATGACTGGACTG
TACCGGATGGCATCAGGAAATTCAAGGCAGCGAGGCTATTACTCTAATAA
CTTAAGGACCAACAAATCGAGCGTGGTGAACTCTTTGAAAACTCTATTAA
CAGAGCTAGACGCCAGAGCTGAAATTAAACCTTTGGGTTGTATAGTATTG
GTCGATAAAGCAACGACTAAAACTAACGATTCTGACAACAGGTAAAAAAT
ATGGCGAAACCTTGGTCAATAACAAACTTGGGTGTACTTCATTATCGTTA
AAAACGTTTAACGGAGCAGATATTACGAACGAGGAAATGAGAAGCAGTAT
GAAACGACAGAAATTGAAATCGAAAGATATCAATGAATCAACTTCTAATG
CCTTCGACAAGATTATCAAGACCAGCGAGGCGTGCTACCTTATCCATTCT
ATTGATGTTATCTTGGAAGCAGCTTCCCACGAAAGCCATTTGAGTCTGCT
CTCATGTGAACAAAGCCTACTTAATCTGGCTAGTTCAAATGAAACAGCAG
GCATATTTTTTGCATGTTCATTCGAGTTAACCAACGAAAACATGGTTATC
ACACGCTATTTTGAGCATGGTTGCTATTCCGGATACTTCAGGACCTTCTA
CAGCATCTATGCCAGCTACTGATACAGAAAGATCAATAAATTCTACGTTT
TGGGAAGGTTCTACTACATCTGACACCAATAAAATCATGCAATCAGATGA
CTGGACTGTACCGGATGGCATCAGGAAATTCAAGGCAGCGAGGCTATTAC
TCTAATAACTTAAGGACCAACAAATCGAGCGTGGTGAACTCTTTGAAAAC
TCTATTAACAGAGCTAGACGCCAGAGCTGAAATTAAACCTTTGGGTTGTA
TAGTATTGGTCGATAAAGCAACGACTAAAACTAACGATTCTGACAACAGG
TAAAAAATATGGCGAAACCTTGGTCAATAACAAACTTGGGTGTACTTCAT
TATCGTTAAAAACGTTTAACGGAGCAGATATTACGAACGAGGAAATGAGA
AGCAGTATGAAACGACAGAAATTGAAATCGAAAGATATCAATGAATCAAC
TTCTAATGCCTTCGACAAGATTATCAAGACCAGCGAGGCGTGCTACCTTA
TCCATTCTATTGATGTTATCTTGGAAGCAGCTTCCCACGAAAGCCATTTG
AGTCTGCTCTCATGTGAACAAAGCCTACTTAATCTGGCTAGTTCAAATGA
AACAGCAGGCATATTTTTTGCATGTTCATTCGAGTTAACCAACGAAAACA
TGGTTATCACACGCTATTTTGAGCATGGTTGCTATTCCGGATACTTCAGG
ACCTTCTACAGCATCTATGCCAGCTACTGATACAGAAAGATCAATAAATT
CTACGTTTTGGGAAGGTTCTACTACATCTGACACCAATAAAATCATGCAA
TCAGATGACTGGACTGTACCGGATGGCATCAGGAAATTCAAGGCAGCGAG
GCTATTACTCTAATAACTTAAGGACCAACAAATCGAGCGTGGTGAACTCT
TTGAAAACTCTATTAACAGAGCTAGACGCCAGAGCTGAAATTAAACCTTT
GGGTTGTATAGTATTGGTCGATAAAGCAACGACTAAAACTAACGATTCTG
ACAACAGGTAAAAAATATGGCGAAACCTTGGTCAATAACAAACTTGGGTG
TACTTCATTATCGTTAAAAACGTTTAACGGAGCAGATATTACGAACGAGG
AAATGAGAAGCAGTATGAAACGACAGAAATTGAAATCGAAAGATATCAAT
GAATCAACTTCTAATGCCTTCGACAAGATTATCAAGACCAGCGAGGCGTG
CTACCTTATCCATTCTATTGATGTTATCTTGGAAGCAGCTTCCCACGAAA
GCCATTTGAGTCTGCTCTCATGTGAACAAAGCCTACTTAATCTGGCTAGT
TCAAATGAAACAGCAGGCATATTTTTTGCATGTTCATTCGAGTTAACCAA
CGAAAACATGGTTATCACACGCTATTTTGAGCATGGTTGCTATTCCGGAT
ACTTCAGGACCTTCTACAGCATCTATGCCAGCTACTGATACAGAAAGATC
AATAAATTCTACGTTTTGGGAAGGTTCTACTACATCTGACACCAATAAAA
TCATGCAATCAGATGACTGGACTGTACCGGATGGCATCAGGAAATTCAAG
GCAGCGAGGCTATTACTCTAATAACTTAAGGACCAACAAATCGAGCGTGG
TGAACTCTTTGAAAACTCTATTAACAGAGCTAGACGCCAGAGCTGAAATT
AAACCTTTGGGTTGTATAGTATTGGTCGATAAAGCAACGACTAAAACTAA
CGATTCTGACAACAGGTAAAAAATATGGCGAAACCTTGGTCAATAACAAA
CTTGGGTGTACTTCATTATCGTTAAAAACGTTTAACGGAGCAGATATTAC
GAACGAGGAAATGAGAAGCAGTATGAAACGACAGAAATTGAAATCGAAAG
ATATCAATGAATCAACTTCTAATGCCTTCGACAAGATTATCAAGACCAGC
GAGGCGTGCTACCTTATCCATTCTATTGATGTTATCTTGGAAGCAGCTTC
CCACGAAAGCCATTTGAGTCTGCTCTCATGTGAACAAAGCCTACTTAATC
TGGCTAGTTCAAATGAAACAGCAGGCATATTTTTTGCATGTTCATTCGAG
TTAACCAACGAAAACATGGTTATCACACGCTATTTTGAGCATGGTTGCTA
TTCCGGATACTTCAGGACCTTCTACAGCATCTATGCCAGCTACTGATACA
GAAAGATCAATAAATTCTACGTTTTGGGAAGGTTCTACTACATCTGACAC
CAATAAAATCATGCAATCAGATGACTGGACTGTACCGGATGGCATCAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000133_pilon | genome | sc0000133_pilon:585071..587095 - |
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