MSTRG.15251.1.p1 (mRNA) -

Overview
NameMSTRG.15251.1.p1
Unique NameMSTRG.15251.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000133_pilon:506659..508421-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.15251.1.p1 ID=MSTRG.15251.1.p1|Name=MSTRG.15251.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1763bp|location=Sequence derived from alignment at sc0000133_pilon:506659..508421- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGGGTTTCAAAAAGCATCATTAAAGACTTCTTAGGAAAAGGACATA
CAAGGTATATCAAATCATAACAAAAATGAAGAGCCTTATTTTATTTTGTG
TGTTCGCTTTCGCGTCTCTTTCATACACAGAAGGTAAGTTCCAGTAAGCT
TCTGAATTCAGCGCTCGTAAGTTTTTAATCTAAAACAGGCACGACGCAAC
GGGTACAGCGGTCGCTGTACTAGATTTTCATAAAAAAAGAAATTTTCCTC
TTCGTCGGTAAAATCGCTTAAATTTCCTCATTCGCCGTACCAGATATAAA
AAGCTTCCATCGTGCCTCTAAAAGGACATTATAGCCCCCAACACCAACAT
CACATTCATTGAGTTCTTACACCATTGTTAGGGACTGCAGTAGAAGTCTG
CGCTCCGGGATGTATTTTCCTCGGGTAGCGTTTTGATATAAGCAGAGTAT
AATCAGTCACGGCGTGGGATTTAGAGTTGATAGGTGTATTAACCATGCTT
TTAATTTACCATTTTCATTTGATCTTAACAACAGGGAAGAAGCACAAATT
GGTAGCGTATTGGGGACAAAATGCCGTATACAATCTGAAGAAAGAAAAGC
AATACTTTGAAAAAATTTATCGCATTTTTGTCGTCATAGTAACTATGACG
TCATCGTTTTGGCATTTATGCATGTTTTCTTTGATGCAAGACAAAAAGGT
AAGACTCGTATCTTTATAACGTAAAAATCTGCTTTGCAAAGGGTCTTAAG
CCATATTCACGGCAGTCGAAATGATTAAAGTAACAAAAACACGATTCATA
TTGAGAGTAATTTGAATTTGAATTCTACTGTAATTCAATGCAAAAATATG
AACGTCTTTATATGACCTTTATGATATTACTTTTAGATTCTATGCCTGGT
ATGAATTTCGCATTCCACTGTGAGACACCGTTAAGCCAAGAATATCCATT
TTTGCTTCGATGTCCCAAAATTGAAGCAGGTATAAAGGAATGTCAAGCAC
GAGGTAAACAAGTACTGCTCTCCCTTGGAGGAGCCACAGGAGGATATGGT
TTTAAAAACGATGCGGAGGCCAAGCTGTTTGCTCAACGGGTGTGGGATCT
TGTGTTGGGTGGTGATAAATTGAAGAAACTTCGACCTTTCGGAAGGTAGT
TTAATTGTTTTCTTTTGTGACAGATATTCATTCATTTCATAATATATAGT
TAAACTCTTCCTCTTGAACGTATAGGGTTTTCTGAAAAAAAAATGTCCTT
ATAAATTAGGTTTTGTGATGAATTTCTAATTTGGACACACGTTTTTTTTT
AATAAAGACATCCAAAATTTTTGAAGCCTATTCGTAGGATATTCTTAACT
TTTGGAGTTTAAGCCTAAAAACATTCTTAACATGTTCTTTTTTCCACCAC
TTTAAGAGTATTTTTGCCCATTTCCTTAATAAATCAGGTGTTTTAGAGTC
TGCAAAGCATTAAAATATGTTCCTAATATTTTGGCCATCGAAGCCTTGTT
CTTATATAGTTTTTTCTTACAAAAAAGGTGTATGTAAGGGTATACCATTA
GAACGTTAATTAAAGGTCCGCAACGCAGAGCTTAGATTTTGATGTGTTAC
ATTTACCTTTCCAGTGCTGTTTTGGATGGTGTTGATTTGGACATTGAGGG
TGGTTCACACATTGGTTACACACAATTCACTCGAACATTACGTAGATGCA
TGGATGCTGATCACTCCAAGACATACATCATTGCAGCAGCTCCTCAATGC
CCCTTCCCTGATC

Coding sequence (CDS) from alignment at sc0000133_pilon:506659..508421-

>MSTRG.15251.1.p1 ID=MSTRG.15251.1.p1|Name=MSTRG.15251.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1314bp|location=Sequence derived from alignment at sc0000133_pilon:506659..508421- (Clytia hemisphaerica_ch_hm2_pilon)
TGCTGTTTTGGATGGTGTTGATTTGGACATTGAGGGTGGTTCACACATTG
GTTACACACAATTCACTCGAACATTACGTAGATGCATGGATGCTGATCAC
TCCAAGACATACATCATTGCAGCAGCTCCTCAATGCCCCTTCCCTGATAT
TCTATGCCTGGTATGAATTTCGCATTCCACTGTGAGACACCGTTAAGCCA
AGAATATCCATTTTTGCTTCGATGTCCCAAAATTGAAGCAGGTATAAAGG
AATGTCAAGCACGAGGTAAACAAGTACTGCTCTCCCTTGGAGGAGCCACA
GGAGGATATGGTTTTAAAAACGATGCGGAGGCCAAGCTGTTTGCTCAACG
GGTGTGGGATCTTGTGTTGGGTGGTGATAAATTGAAGAAACTTCGACCTT
TCGGAAGATGCATGTTTTCTTTGATGCAAGACAAAAAGTGCTGTTTTGGA
TGGTGTTGATTTGGACATTGAGGGTGGTTCACACATTGGTTACACACAAT
TCACTCGAACATTACGTAGATGCATGGATGCTGATCACTCCAAGACATAC
ATCATTGCAGCAGCTCCTCAATGCCCCTTCCCTGATATTCTATGCCTGGT
ATGAATTTCGCATTCCACTGTGAGACACCGTTAAGCCAAGAATATCCATT
TTTGCTTCGATGTCCCAAAATTGAAGCAGGTATAAAGGAATGTCAAGCAC
GAGGTAAACAAGTACTGCTCTCCCTTGGAGGAGCCACAGGAGGATATGGT
TTTAAAAACGATGCGGAGGCCAAGCTGTTTGCTCAACGGGTGTGGGATCT
TGTGTTGGGTGGTGATAAATTGAAGAAACTTCGACCTTTCGGAAGATGCA
TGTTTTCTTTGATGCAAGACAAAAAGTGCTGTTTTGGATGGTGTTGATTT
GGACATTGAGGGTGGTTCACACATTGGTTACACACAATTCACTCGAACAT
TACGTAGATGCATGGATGCTGATCACTCCAAGACATACATCATTGCAGCA
GCTCCTCAATGCCCCTTCCCTGATATTCTATGCCTGGTATGAATTTCGCA
TTCCACTGTGAGACACCGTTAAGCCAAGAATATCCATTTTTGCTTCGATG
TCCCAAAATTGAAGCAGGTATAAAGGAATGTCAAGCACGAGGTAAACAAG
TACTGCTCTCCCTTGGAGGAGCCACAGGAGGATATGGTTTTAAAAACGAT
GCGGAGGCCAAGCTGTTTGCTCAACGGGTGTGGGATCTTGTGTTGGGTGG
TGATAAATTGAAGAAACTTCGACCTTTCGGAAGATGCATGTTTTCTTTGA
TGCAAGACAAAAAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.15251MSTRG.15251Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.15251.1.p1MSTRG.15251.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.15251.1.p1.exon4MSTRG.15251.1.p1.exon4Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.15251.1.p1.exon3MSTRG.15251.1.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.15251.1.p1.exon2MSTRG.15251.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.15251.1.p1.exon1MSTRG.15251.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000133_pilongenomesc0000133_pilon:506659..508421 -