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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000133_pilon:370929..374331- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.15239.1.p2 ID=MSTRG.15239.1.p2|Name=MSTRG.15239.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3403bp|location=Sequence derived from alignment at sc0000133_pilon:370929..374331- (Clytia hemisphaerica_ch_hm2_pilon)
AAAATTCAGGGGGGACCTAATTTTTGCCTGGGGCCTAAACCCAGGCTGAC
GCTATGATCCAGTCTCACACACACACGACTACACGACGGTTGTTTCATGC
TGTTTGGTTTAGAAAGGCAGAAGGGCCATTCCACAATTTCCAGTGTGGAA
TTGGTGCAAATGCCACGCCGAAGGCGTAAAGACAATATTGAATTCCTACG
CCGTAGGTGAAAATGTTTTTATAATTTAAATTTGTTACTTTCAATATAAA
AGAGATCAAAGAAGAATGGCTAAACAAACGCTGTATAGCCCTTTATGGGA
GGGGGAATATTTATGGCTCAAAGAATGCTCTGATGATTTATATTTTGGAA
CTTGCAAGGTTTGTGAAGTAAACTTTTCAGTATTATATGGCTTAAGTTCG
ATTGAGCAGCATGAGAAGTCAAAATCACACCAAGATACTCTTTCAGATGC
TGTAACCAATGCTGAAATAATGTGGGCTTTGCTATACATAGATGCAGATC
TTTCTTTTGATGATAACTTTGGTGTTTCGATGTGTAATGTGTTTTCTGAC
TCTGAAATTGCTAAACATCTAGCAAAAGACCTTACTCCTTATAAAATGAA
ATATATTGTCCAGTATGGCATTGCTCATTATTTTGAAGGGTTTACAAGCT
CCACTGCCAAAGTATCAAACTCAATGATTGATGCTAAAAGAATGATAAAG
GACACTGTCCAATGTTTTGGGTCGTCAGTAAATGTTCCTATAACCAAAAG
CCTGATAGAGACAGTGAAACAAGCAAAACAGAAATGTGATGATCATAGTA
CAAAAAAAGATGCTTCAGCTGTTTCGAAGTCTGAAGAAGAAAATGAGGAG
GACTCGAAAGTTATAGAATTGGATAATTTAAACACTAAACTAAAGCAGAT
TATTCATGGACTGCAGGTAGCTGATGATATCATGGAAAAAAGTAATGAAG
ATGTGAGATCTTGTATGTCTGAAGAGAAAAGCAAGAAACGAAAACAGACT
TTGAAGAGGTCAAAAGCTAGATTTATTGCCAGTGTGAAAAGAAAGAAACA
GTTGAGTGACGACTTGGAAAGCCTTTCAAAGAAGATTGAGGAACTTAAAT
ATCAGTATTAAAGATGGAATTAATTATGCTTGTTCTAATGGTTTTAGAAT
TCGTTTACTTTGTTACTCACTGATCTTGGTCTTTTTATATGAGATCATTT
TTGTGTCAATTGTTCGTCGTTTTTTTTATTATTATACAGTACAATAAAGA
TCTATAAAAACATGCAAAATGTATTATTATTTTGGAAGTCTATGAAAATT
TCTTAATGAAAAGTCTTCGGTATTTCAATCAGGAATATTTCTTATAACAA
TTACATTATATTAAAATCTTTTTTATTATGAACAAAGAATTAAAAAAAAA
AGAAAAAAAGATGAGTTTCCGTGGACGTGGTGGCGGCCGTGGTGGACGTG
GAGGAAGAGGCGGAGGCCGTGGCGGTCGAGGTGGTTTTCGACAACAAGAC
TATGGACCTCCTGAAACTGTCACAGGTATATTATTTATTGTAACTATCAG
CTGCAAAGTTTTATCCGTGCAAGCTTTAATTTAAGATGTAATTTTATTCT
GTTGTGGTAAGAAACTTTTATAAGATTTGTGGTCCTAATTTTGCAGACTT
CGCTCTTTTTACAAAATATTACTAGAAATATTAACCAAGAATATCTGTAA
TTTCCCTCTAGAAATTGGTCATCTTTTACATCCATGTGAAGGTGATATGG
TGTTGAAGTGTACGAACGAAAACGTTCCTTACTTCAACGCCCCAATCTTC
CTTGAAAACAAACAACAAATTGGCAAAGTCGATGAGATTTTTGGTCCCAT
AACTGAGTTCTATTTCTCTGTCAAAATTTCTGATGGTATGAATGCTGATT
CATTCAAAAAATTACAAAAGGTTTGTACGGACAACTACTAAACATTTTTT
AGAATTATTAAAAGATATTGATGCATTTGCTTTCTATTTTGTTTATTTTT
ATACGAGGACAGTACTCCTAACGTAGGGCTTTAGCTTAGATTGTAGGTAA
AGCTTTATAATCTTAAAAACGTGATTGTAGCAATTCTTTTTTTTTCTCAT
TTTAGTTTTTCATTGACCCAATGAAGCTTTTACCTTTAAGTAGGTTCTTA
TCAAGGAATACCAGAGGTAAGTTTATTTTCTTCCTTTACAAATCCTGAAC
AAATTATTAGAAAATTATATTATTTAGAAGATGAAAACAAAAAGACTGAA
TTTGCAGATCAAGTCATTAGATATCTTTTAGCACTACAGTCGACTCTCTC
TAATTCGACGTTCTACTTTTCGATATGCTCCATTATTCGATAATATTGAA
AGTCACTGCCAACAAGAAACTTTCATAAACGACATTCTACTATTTATTCT
ACGCCCCCTTATTCGGTAAGAATCCAATTTTCATTGGAAATCGATTTAGA
GAGCGTCAACTGTATTCCAAAGAAAGTTTGTTCATCAAGCCGTCAAATTG
TTTTTTTATGATTAAACTTTAATCCTTACTTTAATTTTTTCTCGCACCTT
AGGTGGCGGCAGAGGTCGTGGAGGCCGTGGTGGTCGTGGAGGCGGCAGAG
GTGGAGGTCGCGGTGGAGGTAGAGGTGGATTCACACCAAGAGGAAGAGGA
GGCCGAGGCGGTGGTGGTTTCCGTGGCGGAAGAGGCGGTGGCGGCTTCAG
AGGAGGTATGTTTTCTTCTTTATACTGAGTAATGTTTCTTTACTTGCTCG
TTTTTGACCCAAAAGACAACGAATTTTTTTCACTATTCTTTTTGGTTTTA
ATAAGTGCACTTTATAGTTTAGATTCCCATTGAAGAATCATATTCTGGTT
TTCATGTTAATATAATTTTTTTAATTGATTAAAATTTCCTTTTTTGTAGG
TCGAGGACGAGGAAGGTTTTAAGGATATATCAAGGATCAATTTTGTACAT
AGAATTTTTGCAGAAGAAGTGCGTATGTTGTAAAGGGGTATAGGTTACTC
AAGCCATCACGTTTGGAATCAGTCTATGTGGAAACGCCCTTCTCTGAATT
GTAATGTCAGTGAGAATAAGCAAAGACTCCATGTATCTGCTAAAGCGGAA
TTAATGTTTTAAGAACAATGTGGGTGGCGTGAAATGGTTTATGAAATATA
GCAATATGAGTATTGTATAATTTTTTAAAGACAAAGGAGGAAGTTGGTAT
CGGGCCAAATAATATTTTCACAATGATTTTTCAAAAATGAAATTTGTTTT
TAACTTGTTTTTTTCCTCCTGTTGCTTTATTTTTATCTCTTTTTATCGAA
ATATTTTTTATGCCAGATAGAAGAGAATATTTTCACAATTTTATCATTTT
GTGTTTTATCAGGTTTTATAAGAAAAACGAAGATTAACTAGTACGCGAAA
TAT Coding sequence (CDS) from alignment at sc0000133_pilon:370929..374331- >MSTRG.15239.1.p2 ID=MSTRG.15239.1.p2|Name=MSTRG.15239.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2970bp|location=Sequence derived from alignment at sc0000133_pilon:370929..374331- (Clytia hemisphaerica_ch_hm2_pilon)
GTCGAGGACGAGGAAGGTTTTAAGTGGCGGCAGAGGTCGTGGAGGCCGTG
GTGGTCGTGGAGGCGGCAGAGGTGGAGGTCGCGGTGGAGGTAGAGGTGGA
TTCACACCAAGAGGAAGAGGAGGCCGAGGCGGTGGTGGTTTCCGTGGCGG
AAGAGGCGGTGGCGGCTTCAGAGGAGTTTTTCATTGACCCAATGAAGCTT
TTACCTTTAAGTAGGTTCTTATCAAGGAATACCAGAGAAATTGGTCATCT
TTTACATCCATGTGAAGGTGATATGGTGTTGAAGTGTACGAACGAAAACG
TTCCTTACTTCAACGCCCCAATCTTCCTTGAAAACAAACAACAAATTGGC
AAAGTCGATGAGATTTTTGGTCCCATAACTGAGTTCTATTTCTCTGTCAA
AATTTCTGATGGTATGAATGCTGATTCATTCAAAAAATTACAAAAGATGA
ACAAAGAATTAAAAAAAAAAGAAAAAAAGATGAGTTTCCGTGGACGTGGT
GGCGGCCGTGGTGGACGTGGAGGAAGAGGCGGAGGCCGTGGCGGTCGAGG
TGGTTTTCGACAACAAGACTATGGACCTCCTGAAACTGTCACAGGTCGAG
GACGAGGAAGGTTTTAAGTGGCGGCAGAGGTCGTGGAGGCCGTGGTGGTC
GTGGAGGCGGCAGAGGTGGAGGTCGCGGTGGAGGTAGAGGTGGATTCACA
CCAAGAGGAAGAGGAGGCCGAGGCGGTGGTGGTTTCCGTGGCGGAAGAGG
CGGTGGCGGCTTCAGAGGAGTTTTTCATTGACCCAATGAAGCTTTTACCT
TTAAGTAGGTTCTTATCAAGGAATACCAGAGAAATTGGTCATCTTTTACA
TCCATGTGAAGGTGATATGGTGTTGAAGTGTACGAACGAAAACGTTCCTT
ACTTCAACGCCCCAATCTTCCTTGAAAACAAACAACAAATTGGCAAAGTC
GATGAGATTTTTGGTCCCATAACTGAGTTCTATTTCTCTGTCAAAATTTC
TGATGGTATGAATGCTGATTCATTCAAAAAATTACAAAAGATGAACAAAG
AATTAAAAAAAAAAGAAAAAAAGATGAGTTTCCGTGGACGTGGTGGCGGC
CGTGGTGGACGTGGAGGAAGAGGCGGAGGCCGTGGCGGTCGAGGTGGTTT
TCGACAACAAGACTATGGACCTCCTGAAACTGTCACAGGTCGAGGACGAG
GAAGGTTTTAAGTGGCGGCAGAGGTCGTGGAGGCCGTGGTGGTCGTGGAG
GCGGCAGAGGTGGAGGTCGCGGTGGAGGTAGAGGTGGATTCACACCAAGA
GGAAGAGGAGGCCGAGGCGGTGGTGGTTTCCGTGGCGGAAGAGGCGGTGG
CGGCTTCAGAGGAGTTTTTCATTGACCCAATGAAGCTTTTACCTTTAAGT
AGGTTCTTATCAAGGAATACCAGAGAAATTGGTCATCTTTTACATCCATG
TGAAGGTGATATGGTGTTGAAGTGTACGAACGAAAACGTTCCTTACTTCA
ACGCCCCAATCTTCCTTGAAAACAAACAACAAATTGGCAAAGTCGATGAG
ATTTTTGGTCCCATAACTGAGTTCTATTTCTCTGTCAAAATTTCTGATGG
TATGAATGCTGATTCATTCAAAAAATTACAAAAGATGAACAAAGAATTAA
AAAAAAAAGAAAAAAAGATGAGTTTCCGTGGACGTGGTGGCGGCCGTGGT
GGACGTGGAGGAAGAGGCGGAGGCCGTGGCGGTCGAGGTGGTTTTCGACA
ACAAGACTATGGACCTCCTGAAACTGTCACAGGTCGAGGACGAGGAAGGT
TTTAAGTGGCGGCAGAGGTCGTGGAGGCCGTGGTGGTCGTGGAGGCGGCA
GAGGTGGAGGTCGCGGTGGAGGTAGAGGTGGATTCACACCAAGAGGAAGA
GGAGGCCGAGGCGGTGGTGGTTTCCGTGGCGGAAGAGGCGGTGGCGGCTT
CAGAGGAGTTTTTCATTGACCCAATGAAGCTTTTACCTTTAAGTAGGTTC
TTATCAAGGAATACCAGAGAAATTGGTCATCTTTTACATCCATGTGAAGG
TGATATGGTGTTGAAGTGTACGAACGAAAACGTTCCTTACTTCAACGCCC
CAATCTTCCTTGAAAACAAACAACAAATTGGCAAAGTCGATGAGATTTTT
GGTCCCATAACTGAGTTCTATTTCTCTGTCAAAATTTCTGATGGTATGAA
TGCTGATTCATTCAAAAAATTACAAAAGATGAACAAAGAATTAAAAAAAA
AAGAAAAAAAGATGAGTTTCCGTGGACGTGGTGGCGGCCGTGGTGGACGT
GGAGGAAGAGGCGGAGGCCGTGGCGGTCGAGGTGGTTTTCGACAACAAGA
CTATGGACCTCCTGAAACTGTCACAGGTCGAGGACGAGGAAGGTTTTAAG
TGGCGGCAGAGGTCGTGGAGGCCGTGGTGGTCGTGGAGGCGGCAGAGGTG
GAGGTCGCGGTGGAGGTAGAGGTGGATTCACACCAAGAGGAAGAGGAGGC
CGAGGCGGTGGTGGTTTCCGTGGCGGAAGAGGCGGTGGCGGCTTCAGAGG
AGTTTTTCATTGACCCAATGAAGCTTTTACCTTTAAGTAGGTTCTTATCA
AGGAATACCAGAGAAATTGGTCATCTTTTACATCCATGTGAAGGTGATAT
GGTGTTGAAGTGTACGAACGAAAACGTTCCTTACTTCAACGCCCCAATCT
TCCTTGAAAACAAACAACAAATTGGCAAAGTCGATGAGATTTTTGGTCCC
ATAACTGAGTTCTATTTCTCTGTCAAAATTTCTGATGGTATGAATGCTGA
TTCATTCAAAAAATTACAAAAGATGAACAAAGAATTAAAAAAAAAAGAAA
AAAAGATGAGTTTCCGTGGACGTGGTGGCGGCCGTGGTGGACGTGGAGGA
AGAGGCGGAGGCCGTGGCGGTCGAGGTGGTTTTCGACAACAAGACTATGG
ACCTCCTGAAACTGTCACAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000133_pilon | genome | sc0000133_pilon:370929..374331 - |
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