|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000132_pilon:712858..715361+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.15198.1.p1 ID=MSTRG.15198.1.p1|Name=MSTRG.15198.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2504bp|location=Sequence derived from alignment at sc0000132_pilon:712858..715361+ (Clytia hemisphaerica_ch_hm2_pilon)
AAGTTAAAAAATCATCCTCTCAGTTTCGAAAAGAGGAAGAAAATGGTCAC
ACAAAAGAGACTGGATCACATAGTTTAACCAGTTACAAATAAGGGAGTGG
TTAATTGTGCAAATTACATCTGAACTTTCCGATGTAGTATAAATAAGGGT
AAGGACTCACTGAGAAGTCATGCAAAGCAAAAGAAGCCATTGACTTGACT
GACAAGACAAGAGACAcacacaaaacaaaatgaaggGATTGACAACACTC
ATTTGCATCGCTGTAGTAGCAGGTaacattttactttttctcGACATTTG
AATACAAAAGATAGTCCAAACTTTAAACCCGTGCCTCAATTTGGGATGAG
AATTTCTTCggtgtcaaaaaaaaacttccggTTCAgaggcaaaaattaaa
ataagttttaagcgtaacaaaataaaaatcacaTTTGAGTCCCACTGGGa
aggaaagttttttactttgaatCTTGACATTTTGTTTACAGTTCACAGTG
CATGTGGGGCGGTCATCAGCAACGACTTAAACTGCAAGAACACGAACGAT
AAGTGTGATAGATGGGCCAAAGGAGGTAAATGCCATGAAAACCCAGTCTA
CATGATTGTCAGCTGTGCTCCCGCCTGTGACGTCTGTAAGTACATACGCT
actaatataattttattactattctccttaactcgaacatgtTTTCTTGT
CCCGTCAGTtaaccttataaaccttacttcataactACATAATACTCAAT
AATTTccttaatacaccttttcgaccgtagccgctaattgccgcgcgggc
attttttaccaccctaaaatcgTCCGTGTCtttttttCGCGCctgaagac
aatagaaaaatatgtcaaaaagggattggatcgagtttagggtggtaaaa
aatgcccgcgcggcaattggcggctacggtcgaaatgGTGTATTCAAACA
AATTTCTGTTTTCCGCCCGTGTTCGAGACTCGACTGTATAAGGAGCGCAG
AGGAGCGTTCCCACAAAGTGTTACTTTTAAGTCAAGAAGACTTGCTTGAT
ATCAGTTGATTTAAGCTAGGTTTGTTACAGTAGGGTACCTGCCACACCTT
AAAAATCACGTGATCAATGTGAAAAGAAGAAATCCTTTTGCCCCGTAAAG
CTTTATTTGTTTGTTATAAACAATATCAACTTTTAGAAAGACTCTATCTT
TTGCAGTAGCTTGGAAATTAACGACTTTGAAATCCGACTTCTATAAATAC
CATTCTTCTTGTGGCAGGCTTTCACGGTGATAAACGTTGGTCATGCAGTT
ATAAGGCAAGACGTGGAGATTGCACCACAAGTCCTTCATCCATGGATAAG
CTTTGTCCATCAAGTTGCAGTGCTCAAACACAAGAAGGTAATGCTACGTT
CATCTTATCCTACCGTGTGCTTAATAAACGCCCAACGcttgttagttttt
ttatttcttccacACCCTGGACCTTTTAAGGACCCCCTTTCGCGTTTATT
TGTATTTTCAgctatcaaaagaaaattcccttattttgctctaaatagct
aaattttagtctataattaccttattttgaagtacaatttccaaccccca
ggTAATAAGTCCCCTCccgtttatcaaaatttgaaaatatttaccgCATT
AAAACTCGAATGAAGAtctatttttgagatttaaactATCGCCAAACGAT
AATTCCCGATATCTGGGTTAACCCGAGCCTACTATTATTATTTGTGTAAA
CTGTATTTTACCTTTTTGATTCTTTGATTAATAGAACTAATTAAAATTCG
ATTGCTTAATGAATATCAAGATGCCGTTGATTGGTGCAGGATCCATTTGC
ATCTCATTCGAACCATTACATAATGTTTGCATTTCACTTGTAGATAAACG
TTTGGCAGGATGTTTAAATGCGTGCAGTGAATTCGCATGCGCATCAGATA
CAAACCTTCAAAAAGGATGTAATCAAATGTTTTCGTGTACGCATGCGTGT
AAAATGCGACATCTTGGAGTCACTGTCGGTAGGTGCCGAACGAAATGTGA
GCGCAACGGACAATCTGGCTGCTTTCCGAAGGTCAGGGGGTACACATTCA
ATTTATGCGTCGATTGCTCAAGAGAAGGTTGCTCAACCTATCCAACCGTT
GACGAATGTAAAATTGGTTGTGACTACTTTTAAAATGGATAATAAAATCC
AAAGATTGGATATTATCTAAGGTTCGCatatcattttttttagttCTTAA
AAACgggttattttttatttagacaattaaattcttttatatAAGATTAC
ATAAAACTTGAGGGATGATCTGAGGTTAATTTCAGATCCTTTGCCTACTG
AAATCTCTGTCTAGCTTACCTTGCTATTTcttcaaataaattttacctTT
ACTATCTAAActtgagaaaaagttttttgaggTTTCGCCCAGGACAAAAA
CCTTCAGACTTTCATGCCGAAGATCTTTACTTAAGCCATCAGGTTATCAT
TTTG Coding sequence (CDS) from alignment at sc0000132_pilon:712858..715361+ >MSTRG.15198.1.p1 ID=MSTRG.15198.1.p1|Name=MSTRG.15198.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2388bp|location=Sequence derived from alignment at sc0000132_pilon:712858..715361+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaaggGATTGACAACACTCATTTGCATCGCTGTAGTAGCAGTTCACAG
TGCATGTGGGGCGGTCATCAGCAACGACTTAAACTGCAAGAACACGAACG
ATAAGTGTGATAGATGGGCCAAAGGAGGTAAATGCCATGAAAACCCAGTC
TACATGATTGTCAGCTGTGCTCCCGCCTGTGACGTCTGCTTTCACGGTGA
TAAACGTTGGTCATGCAGTTATAAGGCAAGACGTGGAGATTGCACCACAA
GTCCTTCATCCATGGATAAGCTTTGTCCATCAAGTTGCAGTGCTCAAACA
CAAGAAGATAAACGTTTGGCAGGATGTTTAAATGCGTGCAGTGAATTCGC
ATGCGCATCAGATACAAACCTTCAAAAAGGATGTAATCAAATGTTTTCGT
GTACGCATGCGTGTAAAATGCGACATCTTGGAGTCACTGTCGGTAGGTGC
CGAACGAAATGTGAGCGCAACGGACAATCTGGCTGCTTTCCGAAGGTCAG
GGGGTACACATTCAATTTATGCGTCGATTGCTCAAGAGAAGGTTGCTCAA
CCTATCCAACCGTTGACGAATGTAAAATTGGTTGTGACTACTTTTAAatg
aaggGATTGACAACACTCATTTGCATCGCTGTAGTAGCAGTTCACAGTGC
ATGTGGGGCGGTCATCAGCAACGACTTAAACTGCAAGAACACGAACGATA
AGTGTGATAGATGGGCCAAAGGAGGTAAATGCCATGAAAACCCAGTCTAC
ATGATTGTCAGCTGTGCTCCCGCCTGTGACGTCTGCTTTCACGGTGATAA
ACGTTGGTCATGCAGTTATAAGGCAAGACGTGGAGATTGCACCACAAGTC
CTTCATCCATGGATAAGCTTTGTCCATCAAGTTGCAGTGCTCAAACACAA
GAAGATAAACGTTTGGCAGGATGTTTAAATGCGTGCAGTGAATTCGCATG
CGCATCAGATACAAACCTTCAAAAAGGATGTAATCAAATGTTTTCGTGTA
CGCATGCGTGTAAAATGCGACATCTTGGAGTCACTGTCGGTAGGTGCCGA
ACGAAATGTGAGCGCAACGGACAATCTGGCTGCTTTCCGAAGGTCAGGGG
GTACACATTCAATTTATGCGTCGATTGCTCAAGAGAAGGTTGCTCAACCT
ATCCAACCGTTGACGAATGTAAAATTGGTTGTGACTACTTTTAAatgaag
gGATTGACAACACTCATTTGCATCGCTGTAGTAGCAGTTCACAGTGCATG
TGGGGCGGTCATCAGCAACGACTTAAACTGCAAGAACACGAACGATAAGT
GTGATAGATGGGCCAAAGGAGGTAAATGCCATGAAAACCCAGTCTACATG
ATTGTCAGCTGTGCTCCCGCCTGTGACGTCTGCTTTCACGGTGATAAACG
TTGGTCATGCAGTTATAAGGCAAGACGTGGAGATTGCACCACAAGTCCTT
CATCCATGGATAAGCTTTGTCCATCAAGTTGCAGTGCTCAAACACAAGAA
GATAAACGTTTGGCAGGATGTTTAAATGCGTGCAGTGAATTCGCATGCGC
ATCAGATACAAACCTTCAAAAAGGATGTAATCAAATGTTTTCGTGTACGC
ATGCGTGTAAAATGCGACATCTTGGAGTCACTGTCGGTAGGTGCCGAACG
AAATGTGAGCGCAACGGACAATCTGGCTGCTTTCCGAAGGTCAGGGGGTA
CACATTCAATTTATGCGTCGATTGCTCAAGAGAAGGTTGCTCAACCTATC
CAACCGTTGACGAATGTAAAATTGGTTGTGACTACTTTTAAatgaaggGA
TTGACAACACTCATTTGCATCGCTGTAGTAGCAGTTCACAGTGCATGTGG
GGCGGTCATCAGCAACGACTTAAACTGCAAGAACACGAACGATAAGTGTG
ATAGATGGGCCAAAGGAGGTAAATGCCATGAAAACCCAGTCTACATGATT
GTCAGCTGTGCTCCCGCCTGTGACGTCTGCTTTCACGGTGATAAACGTTG
GTCATGCAGTTATAAGGCAAGACGTGGAGATTGCACCACAAGTCCTTCAT
CCATGGATAAGCTTTGTCCATCAAGTTGCAGTGCTCAAACACAAGAAGAT
AAACGTTTGGCAGGATGTTTAAATGCGTGCAGTGAATTCGCATGCGCATC
AGATACAAACCTTCAAAAAGGATGTAATCAAATGTTTTCGTGTACGCATG
CGTGTAAAATGCGACATCTTGGAGTCACTGTCGGTAGGTGCCGAACGAAA
TGTGAGCGCAACGGACAATCTGGCTGCTTTCCGAAGGTCAGGGGGTACAC
ATTCAATTTATGCGTCGATTGCTCAAGAGAAGGTTGCTCAACCTATCCAA
CCGTTGACGAATGTAAAATTGGTTGTGACTACTTTTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000132_pilon | genome | sc0000132_pilon:712858..715361 + |
|
