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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000007_pilon:1196397..1199181- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.1518.1.p1 ID=MSTRG.1518.1.p1|Name=MSTRG.1518.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2785bp|location=Sequence derived from alignment at sc0000007_pilon:1196397..1199181- (Clytia hemisphaerica_ch_hm2_pilon)
TTTCAAGAGGCTAACTTATCTCTGGCACACCCGGTACATACAATAAAGCG
TGAAAATCCCAGACTTCTTTGAAAGCTACCTTTTAAAGTATGTATTGCAA
AGTAGGAAAAGTTTCTATTTTGATGCATGTATTAGGCTTTCCATTTTAAA
TGAAGCTTGACCTGAATTTGATTTTCAATAAAAAAATACCAGAATTTCAT
GAATAAATGATGCATTCGATTACTAAGTTGAGAAAGTTTACAATGAATAA
AGAATGGACAAATACATTATTGATAAGAAGCAAAGTGAAAAGCAATGTGA
AATTGAAAACCTTTGGTTGTTTGGAAAGAAATGAAGAAAGCAAGAACAAT
GAAAGGAAGTGCAACGTGAAAGGTACTGCAGTGTTTTTTGTCCCTTTTAA
TCGTTTTTAGGAACTAGCCAAGCCCTTTTTATTTGGGTATGTCTAAAGGC
CGAGGTAAACGATTCCAACATTACATCCAACATTGAAATTGAAATGTTGG
ACGAATGTTGGATGAATTTTGGAAAGGTGTTGGATCTCCTTAAAATCGTT
TCGTCGCAATGTCCAACATCATTTTCATCCAACATGGGTGTTCATTCATT
CTTTTTTTAATTCATTCTTTTCAAATTAGAAATTGGCGAGAATTTTTATA
CCCAGTGTAACCAGTGTCACTACTGCTGTTCATGCTGTTTATGCAATTAT
AGTCTAACAATTGGAATTTTAAAATGCAGAGAAAATTATGGCGAAAAATC
GACTCTTATGGTGCAATTTCTTGAAATTTATTTATATCTATTTCAAAGCA
AAAAATGGTCAAATTTATTAAAATTTTGCAACAAAAACTATGTTCTCATT
TTTTACACATATATAGTGCATTTTTGGGAAGCCTGAAAAACGTACCTTTA
AAGGGTCACACCTCTACGATAGACGGGACGATAGATCGCTTAATTTCAGG
CCCCCCCCCCTTGGTTTATTTTCCGAAAAAAAAACATTCCAGCTAGTAGC
TTCTCTACCATTTTAAATTTGTTACGAGATTTTTCGAATTTTTGACAAAA
AAACATTCGATTCTATTTCTAATGACGTCATTCCCTTTCAAATGTTGGAT
GTGAGCTGAGTAAACGAATCCAACATGATCCAACACGAAAAAAAGAAGTA
AATGTTGGACAAAATGTTTGATGGCGATCAAACTCCCATCCAACACTTTT
TTCCTTCTTCCAACATAATTTTTTCTTCCTTTCCGATTTTTACATTCGAG
TAAACGATTCCAACATTCCGTCCAACAGAGAGAAAATGGCATGTTGGATG
GAATGTTGGAATCGTTTACCTCGGCCTTAATCGCTCGTTTGCGTTATTTA
TTTTGTTCGTTAACTTTTTTCGCTGTCAGCTTCTATATATATATCTTTCT
GGTTCTCTGGTTTTAAATGAAATTTACCCTTTAAAATTTTTCAAATTGAA
TATTTCCCTTTGTTTTCCCTAGATGTTAAGCAACCGTCCAAACAACGAGA
AATCGTTGAAATCAGTATCCGATGATCTTTCGGACATTAGGAACGACCTA
ACGGACGCTATCAAATACAACGATGAAAAACTTGCATTAGTGGCTGACAA
ACTACAACAATTGGAAGTTCGAGTGGACGAAATCAATGCTGACATGCGTA
GTTCAAAGAATGGCTCACTCTTATGGAAAGTGGGCAATTTTACGGAACTT
TTGGAACGCTCGCACCAGGACCATCAAACATTCGTTGCCAGTGATTTTGT
TTACACAGGTATCTATGGTTACAAGTTAGAGTTCAGACTTTATCCTTATG
GTGTTGGATTAGGCGAAGGAACGCATTTATCACTGTATGTTCTTGTGCAC
AAAACGGAACATGATTTATTGTTACACTGGCCCTTTGAACAGAAAGTGAA
AGTCAAATTGTTAAACATGAACGAATCATCATCAAAACGAGAACACCACA
TCGCAACTATCGGCCCTGATCGTCATTCGTCAAGTTTCGTGCGTCCTTTA
CATGAACACAACCCTGGTTGGGGATTTCCCACTTTTCTTTCGCACCGCGA
TTTACAAAAGAAGACTTTTCTCCGAGAAAATTGTTTGTTCATCAAACTTC
TTGTGGAACCTTACGATGCTTTGGATATCTTCAAACAGAGTTATGATTAA
TCAGAAATTTGAGATTGTCTCTTCTTTGGCAGCCATTACCGAGTTTATGT
ATCGGAGGATATCGAGGGCGACGGTAAGTGAAATGATACAAAACAAAGTC
GATAGTTGATGTACGGCTCTATATCGCCTTTGCTCACCTAAACAGACGAC
GGTATTTTGGTGTTTTTACAGTCGTCGATCAAAGTGGACGGTGATTTTGG
AGACATGTCAACTTTGCTTTATACCGTCCCCCTCGATTTATCTCGAATAC
ATAAACTCGCTATTATGACTTGATGACAGAAAAGCGCCCGTAATCATACG
CAGACATTCTCCCTTGAGGCGGAAATCAAGATAGGATAATTTTCGACATT
TCTAACTCGTATTTAATACATACCGTGGAAAGATATCTACAGACCTTCAG
ATCTTCTGCTCGTGAGATCGTACAACATCACCTTATGTTGACATCTCGAC
TGATTGATTTAACATTTCAATGTCAATAATTTACTCAGATTACATCTCTT
AACTTTTTTTATACGGAAGCAAATGTAAGATATATGAATGTGCTTATATT
TTGAGTTATCTCTAGTTACTTTGTCCTGATGAATGAAATTTCTTACGAAA
AGTCGTGAGAAAAAAAGTTTATTGCCAATAGAAAA Coding sequence (CDS) from alignment at sc0000007_pilon:1196397..1199181- >MSTRG.1518.1.p1 ID=MSTRG.1518.1.p1|Name=MSTRG.1518.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=678bp|location=Sequence derived from alignment at sc0000007_pilon:1196397..1199181- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTAAGCAACCGTCCAAACAACGAGAAATCGTTGAAATCAGTATCCGA
TGATCTTTCGGACATTAGGAACGACCTAACGGACGCTATCAAATACAACG
ATGAAAAACTTGCATTAGTGGCTGACAAACTACAACAATTGGAAGTTCGA
GTGGACGAAATCAATGCTGACATGCGTAGTTCAAAGAATGGCTCACTCTT
ATGGAAAGTGGGCAATTTTACGGAACTTTTGGAACGCTCGCACCAGGACC
ATCAAACATTCGTTGCCAGTGATTTTGTTTACACAGGTATCTATGGTTAC
AAGTTAGAGTTCAGACTTTATCCTTATGGTGTTGGATTAGGCGAAGGAAC
GCATTTATCACTGTATGTTCTTGTGCACAAAACGGAACATGATTTATTGT
TACACTGGCCCTTTGAACAGAAAGTGAAAGTCAAATTGTTAAACATGAAC
GAATCATCATCAAAACGAGAACACCACATCGCAACTATCGGCCCTGATCG
TCATTCGTCAAGTTTCGTGCGTCCTTTACATGAACACAACCCTGGTTGGG
GATTTCCCACTTTTCTTTCGCACCGCGATTTACAAAAGAAGACTTTTCTC
CGAGAAAATTGTTTGTTCATCAAACTTCTTGTGGAACCTTACGATGCTTT
GGATATCTTCAAACAGAGTTATGATTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000007_pilon | genome | sc0000007_pilon:1196397..1199181 - |
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