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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000132_pilon:237330..239221+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.15164.1.p1 ID=MSTRG.15164.1.p1|Name=MSTRG.15164.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1892bp|location=Sequence derived from alignment at sc0000132_pilon:237330..239221+ (Clytia hemisphaerica_ch_hm2_pilon)
AATGTGCAAATTTTCAGATCTTTAGGTAGGAACTAGTTTCTGAAGAGTGA
AGACGCTTTCTGAAAGGTCTCACTCATTTCGTCGATATTATCGATTTGAA
TTGCGCTGATCGAGTCGTATtcggtgaaaatttttaggtaaaCAAAGGAT
AGAATCCCCTATAGCAATGGATTCaaacgaaattatttttaacaatcaaa
aacacaaaCAACGCTCCATTATGCAACCTTTCGATTGCAAAGACACGTGG
GCTGATCTACACAAACAAATGAATGATTCTGTTGAATACACAGACTTCTT
CCGATTCAGTCAAAGTATTTACAAGAATAGAATCAACAATGATGTCAACT
TTCTGGATATCATGGAAAATCCAGAGGAAATCAAAAGTGGATTCAGATAT
CTCCAATCAAGGTAAACAAATCAgtaaatatttcagaaaatccTTTATAA
AGTACGGTTACGGTACGGTTCTGTACCGTTTCTTTTGCCTGTCAAGACCA
TAATATAATTCATCAGGCAGCCTTCGCATATTCTTGCTGGATGTAAAGCT
CTTCTAATTTTTTGAActactgaaatatttttttcttcagatacAACGAG
CTCCACAACTATGTCACAGAATTGGAGAGTGATGTCGACCAATCAATTCA
TCGAATCAAACAATTGAAAAAGAACGCCTTCAAGCAAATGTTTTCAGctg
agaaaaaacttttgagcaACATGTTCAACATTTCATCAGAGTCGAAATAT
TTGCGGGAGAATTTTCACGATCatcagtttgtttacatcgatAATTTGGT
GTTACTTGATGAACGATTGGATGAAGTCGAGGATGTTGACGTTTTGAAGA
AAATGTACACTTATCTTAAACACAGGTGAGGAACGTTTGggaggaaatat
ttttcatgttcaCGTTTTTATTACAACTCTCCTGaaaaaaaCCGGTGAAG
TTAAAAGGCGGCTACATGTGTCAAAATCTCCTTGTGGTGATTGCCAAGAA
ACCTTATTAACCTAAGTAATGGAATCAAATAAACGTCTCAAAGTCACTGT
TATCTCTCTTTTTTTTTTCAGATTCGCTGAACTGCAGAAGTATTCATTGA
TCCAAGAATCAAAAATTGAAAACTGCAAGAATCTTATGGATGAGTTGTTT
GGAAAAATCGAAGGAGAAAATGAAGAGGATACATTTCCATTCGTTAAATC
TCCTGAGGATCGAGTTGGTCATTCTCCCGAGGCAGAAGGACGAGTTGCTC
CCTCTCCCAAAGTAAAAAGACAAGTTGTTCGTTCTCCCGAAGCAGAAGGA
CGAGTTGTTAACTCTCCCGAAGCAGAAGGACGAGTTGGTCACTCTCCAAA
AGTAAAAGGACGTGTCGCTCACTCTCCAAAAGAAGATCGAGTTTTTCTCT
CTTCTGCTCGAAAaggccgagttgttcactcTCCAGTTTCTTACCATCGA
AGAACACCAGTGGATGTCGAACAAAGGGAAGTGACATCACCAGAACACGT
CATGAGATACACACCACTTGATGAAGATGATGActcatcattctttgaaa
atcaaCGAGCTTCTCCAGAGCAGGGATCGCCAGAAAACGAAGAATATGAT
TATGAAAACGAGTTTGACGAAGAACAAACGTACTATGATAACCGTTCTGT
GATTCAAAAACCACAAAGAGCTGTCATGCCGGAAGCTGTCGCTCCAAAGG
GATTACCACCAATCCCAACTCACGTCGTTTCAACCAAGAGAATTGCTCCT
GAATCCaaagttaaaatcttcaaagaaaaagtcaaatctTACAATAACGT
TGGGTCCACTGGTTATGGAAAATCTAAACCAAGACGTAACGAATTTAACA
AGGCCACTATTTTGCCACCTGTTCAAAGCAGAGTCGTCAAAC Coding sequence (CDS) from alignment at sc0000132_pilon:237330..239221+ >MSTRG.15164.1.p1 ID=MSTRG.15164.1.p1|Name=MSTRG.15164.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4050bp|location=Sequence derived from alignment at sc0000132_pilon:237330..239221+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATTCaaacgaaattatttttaacaatcaaaaacacaaaCAACGCTC
CATTATGCAACCTTTCGATTGCAAAGACACGTGGGCTGATCTACACAAAC
AAATGAATGATTCTGTTGAATACACAGACTTCTTCCGATTCAGTCAAAGT
ATTTACAAGAATAGAATCAACAATGATGTCAACTTTCTGGATATCATGGA
AAATCCAGAGGAAATCAAAAGTGGATTCAGATATCTCCAATCAAGatacA
ACGAGCTCCACAACTATGTCACAGAATTGGAGAGTGATGTCGACCAATCA
ATTCATCGAATCAAACAATTGAAAAAGAACGCCTTCAAGCAAATGTTTTC
AGctgagaaaaaacttttgagcaACATGTTCAACATTTCATCAGAGTCGA
AATATTTGCGGGAGAATTTTCACGATCatcagtttgtttacatcgatAAT
TTGGTGTTACTTGATGAACGATTGGATGAAGTCGAGGATGTTGACGTTTT
GAAGAAAATGTACACTTATCTTAAACACAGATTCGCTGAACTGCAGAAGT
ATTCATTGATCCAAGAATCAAAAATTGAAAACTGCAAGAATCTTATGGAT
GAGTTGTTTGGAAAAATCGAAGGAGAAAATGAAGAGGATACATTTCCATT
CGTTAAATCTCCTGAGGATCGAGTTGGTCATTCTCCCGAGGCAGAAGGAC
GAGTTGCTCCCTCTCCCAAAGTAAAAAGACAAGTTGTTCGTTCTCCCGAA
GCAGAAGGACGAGTTGTTAACTCTCCCGAAGCAGAAGGACGAGTTGGTCA
CTCTCCAAAAGTAAAAGGACGTGTCGCTCACTCTCCAAAAGAAGATCGAG
TTTTTCTCTCTTCTGCTCGAAAaggccgagttgttcactcTCCAGTTTCT
TACCATCGAAGAACACCAGTGGATGTCGAACAAAGGGAAGTGACATCACC
AGAACACGTCATGAGATACACACCACTTGATGAAGATGATGActcatcat
tctttgaaaatcaaCGAGCTTCTCCAGAGCAGGGATCGCCAGAAAACGAA
GAATATGATTATGAAAACGAGTTTGACGAAGAACAAACGTACTATGATAA
CCGTTCTGTGATTCAAAAACCACAAAGAGCTGTCATGCCGGAAGCTGTCG
CTCCAAAGGGATTACCACCAATCCCAACTCACGTCGTTTCAACCAAGAGA
ATTGCTCCTGAATCCaaagttaaaatcttcaaagaaaaagtcaaatctTA
CAATAACGTTGGGTCCACTGGTTATGGAAAATCTAAACCAAGACGTAACG
AATTTAACAAGGCCACTATTTTGCCACCTGTTCAAAGCAGAGTCGTCAAA
ATGGATTCaaacgaaattatttttaacaatcaaaaacacaaaCAACGCTC
CATTATGCAACCTTTCGATTGCAAAGACACGTGGGCTGATCTACACAAAC
AAATGAATGATTCTGTTGAATACACAGACTTCTTCCGATTCAGTCAAAGT
ATTTACAAGAATAGAATCAACAATGATGTCAACTTTCTGGATATCATGGA
AAATCCAGAGGAAATCAAAAGTGGATTCAGATATCTCCAATCAAGatacA
ACGAGCTCCACAACTATGTCACAGAATTGGAGAGTGATGTCGACCAATCA
ATTCATCGAATCAAACAATTGAAAAAGAACGCCTTCAAGCAAATGTTTTC
AGctgagaaaaaacttttgagcaACATGTTCAACATTTCATCAGAGTCGA
AATATTTGCGGGAGAATTTTCACGATCatcagtttgtttacatcgatAAT
TTGGTGTTACTTGATGAACGATTGGATGAAGTCGAGGATGTTGACGTTTT
GAAGAAAATGTACACTTATCTTAAACACAGATTCGCTGAACTGCAGAAGT
ATTCATTGATCCAAGAATCAAAAATTGAAAACTGCAAGAATCTTATGGAT
GAGTTGTTTGGAAAAATCGAAGGAGAAAATGAAGAGGATACATTTCCATT
CGTTAAATCTCCTGAGGATCGAGTTGGTCATTCTCCCGAGGCAGAAGGAC
GAGTTGCTCCCTCTCCCAAAGTAAAAAGACAAGTTGTTCGTTCTCCCGAA
GCAGAAGGACGAGTTGTTAACTCTCCCGAAGCAGAAGGACGAGTTGGTCA
CTCTCCAAAAGTAAAAGGACGTGTCGCTCACTCTCCAAAAGAAGATCGAG
TTTTTCTCTCTTCTGCTCGAAAaggccgagttgttcactcTCCAGTTTCT
TACCATCGAAGAACACCAGTGGATGTCGAACAAAGGGAAGTGACATCACC
AGAACACGTCATGAGATACACACCACTTGATGAAGATGATGActcatcat
tctttgaaaatcaaCGAGCTTCTCCAGAGCAGGGATCGCCAGAAAACGAA
GAATATGATTATGAAAACGAGTTTGACGAAGAACAAACGTACTATGATAA
CCGTTCTGTGATTCAAAAACCACAAAGAGCTGTCATGCCGGAAGCTGTCG
CTCCAAAGGGATTACCACCAATCCCAACTCACGTCGTTTCAACCAAGAGA
ATTGCTCCTGAATCCaaagttaaaatcttcaaagaaaaagtcaaatctTA
CAATAACGTTGGGTCCACTGGTTATGGAAAATCTAAACCAAGACGTAACG
AATTTAACAAGGCCACTATTTTGCCACCTGTTCAAAGCAGAGTCGTCAAA
ATGGATTCaaacgaaattatttttaacaatcaaaaacacaaaCAACGCTC
CATTATGCAACCTTTCGATTGCAAAGACACGTGGGCTGATCTACACAAAC
AAATGAATGATTCTGTTGAATACACAGACTTCTTCCGATTCAGTCAAAGT
ATTTACAAGAATAGAATCAACAATGATGTCAACTTTCTGGATATCATGGA
AAATCCAGAGGAAATCAAAAGTGGATTCAGATATCTCCAATCAAGatacA
ACGAGCTCCACAACTATGTCACAGAATTGGAGAGTGATGTCGACCAATCA
ATTCATCGAATCAAACAATTGAAAAAGAACGCCTTCAAGCAAATGTTTTC
AGctgagaaaaaacttttgagcaACATGTTCAACATTTCATCAGAGTCGA
AATATTTGCGGGAGAATTTTCACGATCatcagtttgtttacatcgatAAT
TTGGTGTTACTTGATGAACGATTGGATGAAGTCGAGGATGTTGACGTTTT
GAAGAAAATGTACACTTATCTTAAACACAGATTCGCTGAACTGCAGAAGT
ATTCATTGATCCAAGAATCAAAAATTGAAAACTGCAAGAATCTTATGGAT
GAGTTGTTTGGAAAAATCGAAGGAGAAAATGAAGAGGATACATTTCCATT
CGTTAAATCTCCTGAGGATCGAGTTGGTCATTCTCCCGAGGCAGAAGGAC
GAGTTGCTCCCTCTCCCAAAGTAAAAAGACAAGTTGTTCGTTCTCCCGAA
GCAGAAGGACGAGTTGTTAACTCTCCCGAAGCAGAAGGACGAGTTGGTCA
CTCTCCAAAAGTAAAAGGACGTGTCGCTCACTCTCCAAAAGAAGATCGAG
TTTTTCTCTCTTCTGCTCGAAAaggccgagttgttcactcTCCAGTTTCT
TACCATCGAAGAACACCAGTGGATGTCGAACAAAGGGAAGTGACATCACC
AGAACACGTCATGAGATACACACCACTTGATGAAGATGATGActcatcat
tctttgaaaatcaaCGAGCTTCTCCAGAGCAGGGATCGCCAGAAAACGAA
GAATATGATTATGAAAACGAGTTTGACGAAGAACAAACGTACTATGATAA
CCGTTCTGTGATTCAAAAACCACAAAGAGCTGTCATGCCGGAAGCTGTCG
CTCCAAAGGGATTACCACCAATCCCAACTCACGTCGTTTCAACCAAGAGA
ATTGCTCCTGAATCCaaagttaaaatcttcaaagaaaaagtcaaatctTA
CAATAACGTTGGGTCCACTGGTTATGGAAAATCTAAACCAAGACGTAACG
AATTTAACAAGGCCACTATTTTGCCACCTGTTCAAAGCAGAGTCGTCAAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000132_pilon | genome | sc0000132_pilon:237330..239221 + |
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