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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000132_pilon:234664..237077+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.15163.2.p1 ID=MSTRG.15163.2.p1|Name=MSTRG.15163.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2414bp|location=Sequence derived from alignment at sc0000132_pilon:234664..237077+ (Clytia hemisphaerica_ch_hm2_pilon)
aaattatcaaattatcTTTTTTAGATGTTCAGAGCCAAGAGAATACGGTC
CGTTTTGCGGACGAGTTCGACCGAACAATTTCTTCGCTTTAGAGGGTTGT
ATAGTGATCAAAGTCGACCAGGTCGGTAAAAAAGATGAGAgaagaaaata
ccctaaaattcgATTCATGTTCGATCATTTAAACGAATTGGATATTGTGA
AAGGATCCAGAATACTTCCGTGTCGCGAAGAAGGGTAACAACAAGATTAA
TATTCAATTGATTTTGTCATGTAACATCTTAAATGCCTTGTAAAATTCAC
TTCCCAGAAGCTCTTTTTACATCGAAACGACATCAGCAAATATGCGGATA
TCTCCTACGAAAATGACAGTAAAGGAAGCGACGCCGGGTATCGGTTAGAT
CAAAGTATCTTGTTTATACTCCGAAACTTGAGTAAAGAAAATCTTGTGAA
ACTATCGAAAAAGTCCGTTTTCAACGACACTAATACACAAGTATGTATTC
TTGAGAATCAAGCTCATCACTGgaatatcataaaaaaatatttcagcgAT
TTGCAAAGTGAGCTTGGTCTTATAAGAAAGAAACAGTAGATTATTTCCAG
ATTTCCAGATTCTAGGCGCTCCGTTTgggaaaagaaagaaatcaaaatct
atTCATTTGACTTAACTGACTCCAGAttttttttAGAGTAATAGTATCAG
GGATGAAGTCTCTTAGTGGTGTCATCACATCACCCGAATGGCCTATTGGT
TTCCACCGACATTACCCAACGTCATGTCTTTGGAGAATCAAAGCACAAAA
AGGATTTGTCATTCAATTAAATTTGGTGTTTGCTGGCAAAGTATTTGAAT
CCATTCTTCAATCGTGTGGAAAGTCACCACATCTTCGTATCACAGGTTTG
TATTTCAAATTTAATCTTACTATAATTCTAATAcacttttttagaatttt
agaatGTAAAAGAGGTTGTggtatataaaaaatgaaagtccagGAAAATC
TCAAAGGTCTTGAAAAGCAGGTAGTAAGTATAGTATAATAAAAGAAGCAC
GAATCCTTTAGAGGATGTCAGAAGCCAAGGTTAAGTTCATTCCGCCTGTT
ATGCTACTccttgaaaattacaaaaaatgttccctataaaaatctgcaaa
tctgCTTTTATAAACAGGGCATTCGGTATTTTGTAGGCAAGACATCAAAT
GGAATGGAAGCACTGTGCAACCACATGCGTGGAAGCAGCCTTACACTAAA
CACACAATCCAACGAAGTGGAGATCCGAATGTCTTACACATCTGGAAAGT
TCACACGAGGTTTTGTTTTGGGCTGGACAACCTTTAAAAAGCCAGTTGAA
GGTAACCAGTGTTAGAAAACTCATCTATTGAGAGATGGTTTCGTCATCCC
TGAGttgtaaaagttaaaaatgatcAATTGTGTCACAATAACGACATTCG
CGATGACGGAATTTTCCAATAAATTGACAATTGAGTATTTGTCCCCACTG
AGGGAATCCAGGGCACTTAGTTGCACCTCAAATAGTCTCTAGCCCCTAAC
TAAAGAATACATAAATACATCTGTTATTCTCATTTTTTGTAgcctcagaa
aaaattaatatcGGGAAAATCTTGATCCCACTTCTTGGTATATTGCTCTT
CTTCTCCATCACGTGCAATATTGGAAGAATGTGTCGCCGAAGACAACAAC
AAGTTTGCGAAAGGAATCTCATATCACATGACGCACACACTGACCAAATT
GGCAGGAAGAACAGTATTTTCATTGAAAACGGTAAAACAGAAGGTATCAG
TGTATGAGAGTTCTGTAATCTTTGTGCCTATTCTCTAGTGGTTAAAACGT
ACCATTGATGTATTTCTAGAACTGAGATTTAAGAACTGGTAGCGGCTTGG
ATAGATAAGTTTATTTGCTTTGTCTGTTACCCTTCTAAACGTTATAACAT
ACGTATATATACATAAATCCCTTTTTATTGTTTACAAGTGAATAATCATT
CTTATAGAATCTCAAAATATATTGTTCCTTTTCAGACTTGGCAAGATCAA
AATGAATCGCTGAATGACCTTCCGCCACCTTACGAAGAAGCCGTTGCTGA
GGCAGACAAGGTCTGAACGATAAATGCTAAAAACCAATAAAGACTTGGAG
GAAATAACTCAGTAAATATTCTGATCTCAAAAATGAAAGCATGataatga
tttatttttaaaactatTTCTTAAATGTGGTTAAAGCCTTCAGTTGGATC
ttagtttaatttttctaatgATGGAGTTGATTGTAAAgtcaatttagaat
ttttttacggttttacagtatatttatagtttttctttacgatttaAGAA
TAAACTTAAAACATTTCTTTACGATTTAGCATTATCTATCAATATTCAAA
ACTATAACGACAAA Coding sequence (CDS) from alignment at sc0000132_pilon:234664..237077+ >MSTRG.15163.2.p1 ID=MSTRG.15163.2.p1|Name=MSTRG.15163.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2268bp|location=Sequence derived from alignment at sc0000132_pilon:234664..237077+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGTCTCTTAGTGGTGTCATCACATCACCCGAATGGCCTATTGGTTT
CCACCGACATTACCCAACGTCATGTCTTTGGAGAATCAAAGCACAAAAAG
GATTTGTCATTCAATTAAATTTGGTGTTTGCTGGCAAAGTATTTGAATCC
ATTCTTCAATCGTGTGGAAAGTCACCACATCTTCGTATCACAGGCAAGAC
ATCAAATGGAATGGAAGCACTGTGCAACCACATGCGTGGAAGCAGCCTTA
CACTAAACACACAATCCAACGAAGTGGAGATCCGAATGTCTTACACATCT
GGAAAGTTCACACGAGGTTTTGTTTTGGGCTGGACAACCTTTAAAAAGCC
AGTTGAAGcctcagaaaaaattaatatcGGGAAAATCTTGATCCCACTTC
TTGGTATATTGCTCTTCTTCTCCATCACGTGCAATATTGGAAGAATGTGT
CGCCGAAGACAACAACAAGTTTGCGAAAGGAATCTCATATCACATGACGC
ACACACTGACCAAATTGGCAGGAAGAACAGTATTTTCATTGAAAACGACT
TGGCAAGATCAAAATGAATGAAGTCTCTTAGTGGTGTCATCACATCACCC
GAATGGCCTATTGGTTTCCACCGACATTACCCAACGTCATGTCTTTGGAG
AATCAAAGCACAAAAAGGATTTGTCATTCAATTAAATTTGGTGTTTGCTG
GCAAAGTATTTGAATCCATTCTTCAATCGTGTGGAAAGTCACCACATCTT
CGTATCACAGGCAAGACATCAAATGGAATGGAAGCACTGTGCAACCACAT
GCGTGGAAGCAGCCTTACACTAAACACACAATCCAACGAAGTGGAGATCC
GAATGTCTTACACATCTGGAAAGTTCACACGAGGTTTTGTTTTGGGCTGG
ACAACCTTTAAAAAGCCAGTTGAAGcctcagaaaaaattaatatcGGGAA
AATCTTGATCCCACTTCTTGGTATATTGCTCTTCTTCTCCATCACGTGCA
ATATTGGAAGAATGTGTCGCCGAAGACAACAACAAGTTTGCGAAAGGAAT
CTCATATCACATGACGCACACACTGACCAAATTGGCAGGAAGAACAGTAT
TTTCATTGAAAACGACTTGGCAAGATCAAAATGAATGAAGTCTCTTAGTG
GTGTCATCACATCACCCGAATGGCCTATTGGTTTCCACCGACATTACCCA
ACGTCATGTCTTTGGAGAATCAAAGCACAAAAAGGATTTGTCATTCAATT
AAATTTGGTGTTTGCTGGCAAAGTATTTGAATCCATTCTTCAATCGTGTG
GAAAGTCACCACATCTTCGTATCACAGGCAAGACATCAAATGGAATGGAA
GCACTGTGCAACCACATGCGTGGAAGCAGCCTTACACTAAACACACAATC
CAACGAAGTGGAGATCCGAATGTCTTACACATCTGGAAAGTTCACACGAG
GTTTTGTTTTGGGCTGGACAACCTTTAAAAAGCCAGTTGAAGcctcagaa
aaaattaatatcGGGAAAATCTTGATCCCACTTCTTGGTATATTGCTCTT
CTTCTCCATCACGTGCAATATTGGAAGAATGTGTCGCCGAAGACAACAAC
AAGTTTGCGAAAGGAATCTCATATCACATGACGCACACACTGACCAAATT
GGCAGGAAGAACAGTATTTTCATTGAAAACGACTTGGCAAGATCAAAATG
AATGAAGTCTCTTAGTGGTGTCATCACATCACCCGAATGGCCTATTGGTT
TCCACCGACATTACCCAACGTCATGTCTTTGGAGAATCAAAGCACAAAAA
GGATTTGTCATTCAATTAAATTTGGTGTTTGCTGGCAAAGTATTTGAATC
CATTCTTCAATCGTGTGGAAAGTCACCACATCTTCGTATCACAGGCAAGA
CATCAAATGGAATGGAAGCACTGTGCAACCACATGCGTGGAAGCAGCCTT
ACACTAAACACACAATCCAACGAAGTGGAGATCCGAATGTCTTACACATC
TGGAAAGTTCACACGAGGTTTTGTTTTGGGCTGGACAACCTTTAAAAAGC
CAGTTGAAGcctcagaaaaaattaatatcGGGAAAATCTTGATCCCACTT
CTTGGTATATTGCTCTTCTTCTCCATCACGTGCAATATTGGAAGAATGTG
TCGCCGAAGACAACAACAAGTTTGCGAAAGGAATCTCATATCACATGACG
CACACACTGACCAAATTGGCAGGAAGAACAGTATTTTCATTGAAAACGAC
TTGGCAAGATCAAAATGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000132_pilon | genome | sc0000132_pilon:234664..237077 + |
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