MSTRG.15156.1.p1 (mRNA) -

Overview
NameMSTRG.15156.1.p1
Unique NameMSTRG.15156.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000132_pilon:104436..109685-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.15156.1.p1 ID=MSTRG.15156.1.p1|Name=MSTRG.15156.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5250bp|location=Sequence derived from alignment at sc0000132_pilon:104436..109685- (Clytia hemisphaerica_ch_hm2_pilon)
ATATTTTGTTCTATTTGTGCAATTTGTTTATAAAAACGCTTTAATTAACA
CATACATCATTAAATATGAATTGAGCTATTCTTCTTTCCCTTTACAGAGA
TTAAATTGAAAAATATAAAAATAATGGAAATACATTTTCTTGGCACTGGT
TCTGCATTTCCCTCACCGAAGAGATGTTCTTCGTGCACTGCAATCCGGAT
GGATTCTGGTTCTGTTTGGTTGTTTGATTGCGGTGAAGGTGGTCAAATAC
AAATACAGAAAAGCAAAATTCGGCCAGCCAAGATTAGCTCTGTGTTTATC
ACTCATTTGCATGGTGATCACATGTTTGGGTTGCCAGGCATGATGTGCAC
CATCAGTCAAGCCGTGGAGGGACAACATTTAGATGTTTATGGTCCCATGG
GATTGAAAAACTTCTTGAGATGTTCATTAAGTCTGTCTTTCTCAAATCTC
TCTTATTCTTTCACGGTGCATGAAATAAAATTGCCAGATATTCAAGGTAT
GACTGCTTTCTTAATTTCGCGTCACCCTTTAAATCAACAGTGCAGTCTAC
TTTTTATTCTCGTTTAAGAACGTTTGCGTTTTGTGAGTCAAGGAACATTG
AATCATGTTTATGTTTACTGAAAAAGATATATGACAAGGAGACTTATTTC
AATAGACTGTTTACCATTCATTGCTTATCCTACTTTTTCATTTACTTGTT
CCAGAATTTATGGAGAATTGTGACATTGAAATAGACAGTGAATACTGGCA
GAAACTGTCTGATTTTTCGAAACGCGAATTCCCACCCCACCCTAACGAAG
TTGACACGAACCACATCATTGAGAAAAACGAAGAAGGTTTCTATCATGTT
TGTTATATGGACAGATTCAATGTTTATGCAGCTGATATAAAACACACTGT
GCCTTGCTTAGGTTATGTATTGTGTGAGGATAACATTCCTGGAAAACTAG
ATGTCACTATCTTGAAGAAGAAAGGTGTCCCAGCAGGTCCACTTTATGGG
AAAATCAAAAATGGTGAATCAATCACCCTCGACGATGGAACTGTCATTTC
ACCCAATGATTGTTTAGGTCCCGACAGACCAGGAAGGAAAATCGTCCATC
TCGGTGATACTCACGATCCTTCGGCTATCGGTGATTTAGCACGTGGTGCT
ACCATTTTGATTCACGAGGCAACCAATGAAAATGCAGATTTTGAAAAATG
TCTTGCTCATGGGCATTCGACTGCAGGTTCGTTGTGTTGGATTAAAATGT
TTCAAAGCTTTTTTTAAAAAAGTTCTTCTATTTTATTCTTCTCGACACAA
CAGATTAACATTAACATCACATCAAGATCCTACACGCATTCCCAAAAGTA
ATTAATTACATATTTGGAGTAATAACCGTCGACTTTTCCAAACGCTAACT
TTATCACTAATAATTTCTTATCTTGCCTTATTGGTTTCTTTTCCAGGTAT
GGCGGGTAAATTTGCGTGCACCATCGAAGCGCAGAAGTTGATCTTGACAC
ATTTCAGTCAGCGATACAGTGAAGAAGAGACCAACACCATTCTGGTGCAA
GAAGCCAAGGAGACTTTTGGTTCGGATAATGTACTTGCTGCCGCTGATCT
CATGGTTGTACCTGTGTTGTTACCTCGATGAAAGTGAAAGATGTTTTGAA
TGGCGAGGAAGCCTTCGGAGTAAGGTGTGAGTAAGATAGCAAGCTCGATA
TGTCTGCGCTTCTCCCTTGGATTCAACAGTGTAGGCGTAATTCATCATGT
TTGTCATTATATCACATCGTTTTCAAATGCAACGATGCATCGTTGAAAAA
CTAATATTATGATCCGCTACTCAAAGATCTGTTAAATCAAAAAACCAAGA
AACATTGATCAATGTTTATCTGTGCATCTGTGCTCCGTCAAGCCAGTTGA
TGTCACATCAAGAAGTCATTGCTGTGCTACAGATGAATTTGCTCGTTATA
TTTTCATAAACATATTTTGTCATGGGCGTGGCAACATCTGTACTGTTGTT
TAATTAGAAAAAAACTAACTTTGGGGAAAACCAGTAACTTTCGTGTTTAT
AAGTATTTACCACGGAAATAGGTTCATTGAAATGCAAATTCTTGTAAATC
TTATAAAATAAATAAATTAGACTTTCCACTTTCTCGTTTCAGAGTTATAC
CAACAACACAACAAGAATTAAACAAAAAAACAACAAAATGAAGTCATTGG
TCACTAGGCTTTTGATTTCACTCACACCATTGGAAACCAGTGTTTTGATC
TTCGTTTCATTTGTATTATTTTACACAATGTACGACAAATTCACCGGTCG
GCTGGTTCCTTCAAATCTTTTACGGTTACTGACTTTCCAAGAAGGTGTTG
ACAAATTCTTGGTTGAAATGAACAAAGCGCTGTCTCTATCTGGTCTTACT
GTATTGGCATTTTCATTTTTCCCGATCTATAAAAAACGTGTAAGATATGC
ATTATTATGGAGCGCTGTCGTCCAACTCTGGATTCATGCCGTGTATTCGA
CGCTCAAGTATTACGGAAGCAAAAACATTCCTCGAATTTCAACATTTTTT
GATTGGAACAGTGAACAGATAAAAAAGATTTCCATTTTGCTTGGCATCAT
GGCGCAGGTCGTCTTATCACTTGGATATTTCTCGTATATCGGTTGGTTCC
AACTCTCCTTATTCGGTCTTTCCTCCAGTATCTTGCATTTCTACACCATG
GAAATTGATCATAAATATGTGTTGCGCGTTCGACCGTACGCCTACATTGT
CTTCCCTATAACACTGCTCGCCTTTGTCTATGGATGCAAGTTATTTTAAG
ATGCAGACGAAAATTTCTTTTGCGCATGGTTAAGTTTTGAACGTTTTTTT
GTTGGATGATGAGATTTTTTTAATGTATGTAATGTATAATGTTGCAGGTT
ACTGTGTATAGTTTAAAAAATGAAATAAAAAAGTGTCGTATTTTCCGGTA
ACAATATTTAATGTCTTTTCCTGGAATTTTTGATTTGGACCATTTCAAAA
ATCTAATGATGTATTTGTTCTCAAATGCTTAATGAACAGTTTTCCACCTT
ATTTTTACAGTGAAAAACAATAGATAGAAAAAGAAATGGCGCAAAAGAAA
TTATCTGGAGTGTTGAAGATGTATGTCGCAGCAGGAAAAGCCGCCCCTTC
GCCACCACTTGGTCCCGCCCTTGGGCAGGTTAGTCTTTTTGTATGAATTA
TTATATTATGACATCCATGTGTGTCGTAGAATGCAGGATTGATTTTCGGA
GCCCCACATCATTTAGACACGAGTTTGTTTCGCACTTTACATTTGATAGA
ATGTGTTGAGACTGGGCTCGACTCTCTTCAAATTATAAAGGCTACTTTAA
GTAAAACCACAAGCAAAAATGCTAAACTTTTGAATACTTTTTGTTTCCCT
CAAAACTCTAAAGGGTAAAAGCTATTGCAATGTCATTTCAGCGTGGTATC
AATATCATGCAATTTTGTAAGGATTTCAACGAACGAACGAAAGATTACAA
ACAAGGAGTTCCCATACCAACGCGTGTCGTTTACAAGGTCAGTTTGCTCA
ACCGTATCATGTGATTTTGTACTCAGTTTTCCTCCCTCTCATCCAGTTCA
TTGGGTATCGAATTGTACAGTCTTCCGTTTCTAAGTCTTCAATGGACTGA
AAGTAAGGACATTTTAAACTTCAGATTATTCCTCTCCAATACTCTAACGT
AGGTAGAGCACAGTAAAGTTTCCAGGACTAAAACCAACTTAGTATATGTA
ATTACATGATAACGAGTGCAATTCGGTTATAATTGCACGAGTGATTTTTT
TGTTATTAATTTTCCGAGTCCGAAAAAACAAAAAAATCACGAGTGCAATT
TTCGAATTGAACGAGTTATTATGTGATTACGAGCTAATCGCACAATGGCT
GTCACTACTTTTCCCAGTCAGGAAAGTAAATTACAGAAATTACACTGAGA
GTTTTTTCTCCTCTCTCTGTGTCTTTCTTTTATTGTTGTTTATTGGTTTT
CTTTCTCACAAAATAAATTTCGAATGCAATTAAAACGTTCGATGCAAAAA
AAAGTGCAAGAAAAAACATTAAAAGCAATTTTGTAAACATTGGAGTGGCA
TCGGAGAGTTTGATTAACGATTAATTGCTCTCTACAGAATGCAATTAACG
ATTAATTGCTCTCTTTGAGGGCGTGCCAAATAAGAAAAAATAACTCATCG
TGCGATTATAAATTATAATTGCAATAAAACATAAGCGAGAAACTTGACCA
AGCATGTTTTATTTTTCATACAAAAAGACCTTTTATTTCAATCATTACTT
TTAGGACCGCAAATTTGACTTTACGATCAGTCAGCCACCTGCAACCTTCT
TCTTGAAACAAGCTGCTGGTGTCGAAAAAGGCTCTTCCAACCCTGGTAAG
TGTTTCCCATGGCTTTCTTGCCCGTTGATTGATCTCGTGATCCAACCACC
ATATGAATATCACTGTCGATGAACTGAAACTTATTTGGAAAAATAAGACC
CTTTTTCTTTCTTTATATTCAGGTCGTGAGATGATTGGTTCCGTAACATT
GAAACAGATTTACGAGATCGCCCTTGTCAAAGGAAAAGATGAAGGTTTTA
AGAATACAGACCTTCAAGGAGTTTGCAAATGTCTGATAGACTCTGCTCAT
AGTATGGGCATCGAAATAATCAACGACAGAAGTGAAGAAATGACGACGGA
AGAATCTATTAGTGCTGTTGCAAGCTGATTTTCATTGTGTCATTACGAAT
TTCATTTGGATTGCCGTGTGAAGGTTTTCAGGTTCACTGACACTACAAAA
TGTTTTCGTGGCATCGATTTATTTCTTGAGTGGCAGCAGAATCAGTACCA
GACACTAAGAATACTTCAATTAATCGTCGTGTTGCGATATGTCGAATTAA
AGGAATCGAATCGCTTGGCATAACCTGAACCTCTAGAAAACTAGAGCAAA
AGATTTTACAAATATATATTAAAACTCATTTTTATGGTGTCGAGTACGTT
CTGAAACGTCGTAACAGGTTCATGAGACCACGCCTTTCGTGCAGTTCTTT
AGAGAACAATGAAGTATATTTTGACCGCCTTTGAGTCACGTGTGGATCAT
ACGATTACCTAAACAAGATTTGAACCAGTGCTCTTAATTTTTTTTAGATC
GGGAGACATAACGATCCAAAGTTTTAACTTACTCATACCTATATAGTCTA
CGGATACATCTCAGTGAAGCTTTTCGGTTAATTTTTTTTTTCACCAAGCC

Coding sequence (CDS) from alignment at sc0000132_pilon:104436..109685-

>MSTRG.15156.1.p1 ID=MSTRG.15156.1.p1|Name=MSTRG.15156.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3240bp|location=Sequence derived from alignment at sc0000132_pilon:104436..109685- (Clytia hemisphaerica_ch_hm2_pilon)
GTATGGCGGGTAAATTTGCGTGCACCATCGAAGCGCAGAAGTTGATCTTG
ACACATTTCAGTCAGCGATACAGTGAAGAAGAGACCAACACCATTCTGGT
GCAAGAAGCCAAGGAGACTTTTGGTTCGGATAATGTACTTGCTGCCGCTG
ATCTCATGGTTGTACCTGTGTTGTTACCTCGATGAAATTTATGGAGAATT
GTGACATTGAAATAGACAGTGAATACTGGCAGAAACTGTCTGATTTTTCG
AAACGCGAATTCCCACCCCACCCTAACGAAGTTGACACGAACCACATCAT
TGAGAAAAACGAAGAAGGTTTCTATCATGTTTGTTATATGGACAGATTCA
ATGTTTATGCAGCTGATATAAAACACACTGTGCCTTGCTTAGGTTATGTA
TTGTGTGAGGATAACATTCCTGGAAAACTAGATGTCACTATCTTGAAGAA
GAAAGGTGTCCCAGCAGGTCCACTTTATGGGAAAATCAAAAATGGTGAAT
CAATCACCCTCGACGATGGAACTGTCATTTCACCCAATGATTGTTTAGGT
CCCGACAGACCAGGAAGGAAAATCGTCCATCTCGGTGATACTCACGATCC
TTCGGCTATCGGTGATTTAGCACGTGGTGCTACCATTTTGATTCACGAGG
CAACCAATGAAAATGCAGATTTTGAAAAATGTCTTGCTCATGGGCATTCG
ACTGCAGATGGAAATACATTTTCTTGGCACTGGTTCTGCATTTCCCTCAC
CGAAGAGATGTTCTTCGTGCACTGCAATCCGGATGGATTCTGGTTCTGTT
TGGTTGTTTGATTGCGGTGAAGGTGGTCAAATACAAATACAGAAAAGCAA
AATTCGGCCAGCCAAGATTAGCTCTGTGTTTATCACTCATTTGCATGGTG
ATCACATGTTTGGGTTGCCAGGCATGATGTGCACCATCAGTCAAGCCGTG
GAGGGACAACATTTAGATGTTTATGGTCCCATGGGATTGAAAAACTTCTT
GAGATGTTCATTAAGTCTGTCTTTCTCAAATCTCTCTTATTCTTTCACGG
TGCATGAAATAAAATTGCCAGATATTCAAGGTATGGCGGGTAAATTTGCG
TGCACCATCGAAGCGCAGAAGTTGATCTTGACACATTTCAGTCAGCGATA
CAGTGAAGAAGAGACCAACACCATTCTGGTGCAAGAAGCCAAGGAGACTT
TTGGTTCGGATAATGTACTTGCTGCCGCTGATCTCATGGTTGTACCTGTG
TTGTTACCTCGATGAAATTTATGGAGAATTGTGACATTGAAATAGACAGT
GAATACTGGCAGAAACTGTCTGATTTTTCGAAACGCGAATTCCCACCCCA
CCCTAACGAAGTTGACACGAACCACATCATTGAGAAAAACGAAGAAGGTT
TCTATCATGTTTGTTATATGGACAGATTCAATGTTTATGCAGCTGATATA
AAACACACTGTGCCTTGCTTAGGTTATGTATTGTGTGAGGATAACATTCC
TGGAAAACTAGATGTCACTATCTTGAAGAAGAAAGGTGTCCCAGCAGGTC
CACTTTATGGGAAAATCAAAAATGGTGAATCAATCACCCTCGACGATGGA
ACTGTCATTTCACCCAATGATTGTTTAGGTCCCGACAGACCAGGAAGGAA
AATCGTCCATCTCGGTGATACTCACGATCCTTCGGCTATCGGTGATTTAG
CACGTGGTGCTACCATTTTGATTCACGAGGCAACCAATGAAAATGCAGAT
TTTGAAAAATGTCTTGCTCATGGGCATTCGACTGCAGATGGAAATACATT
TTCTTGGCACTGGTTCTGCATTTCCCTCACCGAAGAGATGTTCTTCGTGC
ACTGCAATCCGGATGGATTCTGGTTCTGTTTGGTTGTTTGATTGCGGTGA
AGGTGGTCAAATACAAATACAGAAAAGCAAAATTCGGCCAGCCAAGATTA
GCTCTGTGTTTATCACTCATTTGCATGGTGATCACATGTTTGGGTTGCCA
GGCATGATGTGCACCATCAGTCAAGCCGTGGAGGGACAACATTTAGATGT
TTATGGTCCCATGGGATTGAAAAACTTCTTGAGATGTTCATTAAGTCTGT
CTTTCTCAAATCTCTCTTATTCTTTCACGGTGCATGAAATAAAATTGCCA
GATATTCAAGGTATGGCGGGTAAATTTGCGTGCACCATCGAAGCGCAGAA
GTTGATCTTGACACATTTCAGTCAGCGATACAGTGAAGAAGAGACCAACA
CCATTCTGGTGCAAGAAGCCAAGGAGACTTTTGGTTCGGATAATGTACTT
GCTGCCGCTGATCTCATGGTTGTACCTGTGTTGTTACCTCGATGAAATTT
ATGGAGAATTGTGACATTGAAATAGACAGTGAATACTGGCAGAAACTGTC
TGATTTTTCGAAACGCGAATTCCCACCCCACCCTAACGAAGTTGACACGA
ACCACATCATTGAGAAAAACGAAGAAGGTTTCTATCATGTTTGTTATATG
GACAGATTCAATGTTTATGCAGCTGATATAAAACACACTGTGCCTTGCTT
AGGTTATGTATTGTGTGAGGATAACATTCCTGGAAAACTAGATGTCACTA
TCTTGAAGAAGAAAGGTGTCCCAGCAGGTCCACTTTATGGGAAAATCAAA
AATGGTGAATCAATCACCCTCGACGATGGAACTGTCATTTCACCCAATGA
TTGTTTAGGTCCCGACAGACCAGGAAGGAAAATCGTCCATCTCGGTGATA
CTCACGATCCTTCGGCTATCGGTGATTTAGCACGTGGTGCTACCATTTTG
ATTCACGAGGCAACCAATGAAAATGCAGATTTTGAAAAATGTCTTGCTCA
TGGGCATTCGACTGCAGATGGAAATACATTTTCTTGGCACTGGTTCTGCA
TTTCCCTCACCGAAGAGATGTTCTTCGTGCACTGCAATCCGGATGGATTC
TGGTTCTGTTTGGTTGTTTGATTGCGGTGAAGGTGGTCAAATACAAATAC
AGAAAAGCAAAATTCGGCCAGCCAAGATTAGCTCTGTGTTTATCACTCAT
TTGCATGGTGATCACATGTTTGGGTTGCCAGGCATGATGTGCACCATCAG
TCAAGCCGTGGAGGGACAACATTTAGATGTTTATGGTCCCATGGGATTGA
AAAACTTCTTGAGATGTTCATTAAGTCTGTCTTTCTCAAATCTCTCTTAT
TCTTTCACGGTGCATGAAATAAAATTGCCAGATATTCAAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.15156MSTRG.15156Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.15156.1.p1MSTRG.15156.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.15156.1.p1.exon6MSTRG.15156.1.p1.exon6Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.15156.1.p1.exon5MSTRG.15156.1.p1.exon5Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.15156.1.p1.exon4MSTRG.15156.1.p1.exon4Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.15156.1.p1.exon3MSTRG.15156.1.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.15156.1.p1.exon2MSTRG.15156.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.15156.1.p1.exon1MSTRG.15156.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000132_pilongenomesc0000132_pilon:104436..109685 -