MSTRG.15099.2.p1 (mRNA) -

Overview
NameMSTRG.15099.2.p1
Unique NameMSTRG.15099.2.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000131_pilon:229789..233477+

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.15099.2.p1 ID=MSTRG.15099.2.p1|Name=MSTRG.15099.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3689bp|location=Sequence derived from alignment at sc0000131_pilon:229789..233477+ (Clytia hemisphaerica_ch_hm2_pilon)
aattcttgatTTTAGTATAGATAAAATTGTAATCACTGTCAGCTATATTT
GGCATCAGAAAATTCATCATCAAATtcgaattgaaattgaaatccaGACT
TTCAAAGATATGGCCAATAATTACGCAAGAGGTAATATTTCCTaatgttt
ttggacctaccttaagaAGAGGTCCTATACATTAACCTATGCCCGTCCGT
TcatccgttcgtccgtccgacCGTCTGTTATTAGGTTTTCTggggattgg
ctcattcaatttttttgaatgagccaaaaaactgaaaaactgaATCTTTA
TCCCAAAGAATCCTTATTTATAAGCTTAGATCAATGTTCCTAACCAAATA
ACTCAAGTTTTAGATAATAAATAGTCTCTTCCTTCCAACCTCCTCCCTTA
ATTCCACCCAATGGGCACGGgggacaatcaatgatgaaaacacaccccct
tctcacagacccactgggaaacccttcccactgaaaaaattggccaaaat
aacATCCCctgtggaaaattatcctccaatttttgtccccattgaagata
atcaaataaacttatcctcactgcaaaacaatttaaatatttttgttatc
cCCATTGaatcttctgacttgaaaacaaaagagttGACATCCggccagcc
ataaaaaatataggTATATATCCCCACtgagttttagtccgttattttta
tccccactggctgaaaaaatcctaccgggtctgtgtgAAGGGGAATAACT
TTAATAAACTGTCACTTTTTATGCTCTGAATGACTGTAGAAAAATACAGG
ACTGGTTCTgttttttaaggattttagaaTAAGAATTTGATCTCCTGCtt
tttttCTCGTTCATTTGTTCAGGAGCTCCTGCCAATGTTCAAGAAGAGGA
ACATCAACAGCCTTTGGCAGCAGGTATTTTATATTGATTATAAATAAACT
CTTTATTCCATGAATAAAATTTTGACCCCTTAACTCGCATCAGTATTCTA
GGATATTCGAATTGCTCAAAAACAGTTTTATTAATGTAGATGCTTAACTT
TTATCACGCATAAGacaatcctaccgggtctgtgtgAAGGGGTTGTGAAC
GAACGAAGGATTTAAATAAATCGTCACTGTTTTTAtattctgaatgattg
ttttaacGGTCACGCttacgtagatatcaattatatattgGTTagatgca
taaccaggtaggtccataaaagtatcgcttatTAATATTTTTCGACATTG
ACTGTTTTGACTATGAAGAGACAAGACATACGCGAGAAAGTTATATTCTT
ATTAGTCAGCCACAAAAGGATTTTATCCACTCTTCAAAATGGCCGCTAAT
TAACTGTCCATATTGTTCTCTTGATTTGATAAAGAAAGCAGCAGGAGAAA
TTTTTCCCTTTAAATGGAGCTGTTCGCCTTTTTAAATTGCCTATCTGCAA
ATAATTTTAACAAATATCATGTTTCTTAGACTTGGACAGAGCCAATGACG
AATATTGGATGAATTTGTGGTCGAACAATAATAGTGAGATTTTTCAATAA
TATTCTTCACAGTGTTGTTCATTTTTTCTAATTCTTGAACAATTCCATTC
GTAATGATAAATCCTTTCTTAGTACAAACTAAACCTTGAAATCTATTACT
ATTTTTGTAGATCCATCAAACAaacttttatatattttaaatgTGTGGCC
AAATTGAAGcttgagaaaagtttttttcaatttcagattGCTATTGGAAA
CATTCAGATTTCTCCAATTTTCTATACATAGAAAAATACAAGACTGGTTC
tgatttttaaggattttagaaTAAGAATTTGATCTCCTGCtttttttCTC
GTTCATTTGTTCAGGAGCTCCTGCCAATGTTCAAGAAGAGGAACATCAAC
AGCCTTTGGCAGCAGGTATTTTATATTGATTATAAATAAACTCTTTATTC
CATGAATAAAATTTTGACCCCTTAACTCGCATCAGTATTCTAGGATATTC
GAATTGCTCAAAAACAGTTTTATTAATGTAAATGCTTAAGTTTTATCACG
CATAAGacaatcctaccgggtctgtgtgAAGGGGTTGTGAACGAACGAAG
GATTTAAATAAATCGTCACTGTTTTTAtattctgaatgattgttttaacg
gtcacgctcacgtatatatcaattatatattgGTTagatgcataaccagg
taggtccataaaagtatcgcttattaatattttttcgaCATTGACTGTTT
TGACTATGAAGAGACAAGACATACACGAGAAAGTTATATTCTTATTAGTC
AGCCACAAAAGGATTTTATCCGCTCTTCAAAATGTCCATTTTTAGGCAAT
CTTATTTTTCTCTGGATTTGATTAAGAAAGCAGCAGGAGAAACTTTTCCC
TTTAAATGGAGCTGTTCGCCTTTTTAAATTGCCTATCTGCAAataatttt
aacaaatattaTGTTTCTTAGACTTGGACAGAGCTAATGACGAATATTGG
ATGAATTTGTGGTCGAACAATAATAGTGAGATTTTTCAATAATATTCTTC
ACAGTGTTGTTCATTTTTTCTAATTCTTGAATAATTCCATTCGTAATGAT
AAATCCTTTCTTAGTACAAACTAAACCTTGAAATCTAATACTATTTTTGT
AGGTCCATCAAACAaacttttatatattttaaatgTGTGGCCAAATTGAA
GcttgagaaaagttttttttcaatttcagattGCTATTGGAAACATtcaa
atttctccaattttctaTACATAGAAAAATACAGGACTGGTCCtgttttt
ttaaggattttagaaTAAGAATTTGATCTCCTGCtttttttCTCGTTCAT
TTGTTCAGGAGCTCCTGCCAATGTTCAAGAAGAGGAACATCAGCAGCCTT
TGGCAGCAGGTATTTTATATTGATTATAAATAAACTCTTTATGCCATGAA
TAAAATTTTGACCCCTTAACTCGCATCAGTATTCTAGGATATTCGAATTG
CTCAAAAACAGTTTTATTAATGTAGATGCTTAACTTTTATCACGCATAAG
acaatcctaccgggtctgtgtgAAGGGGTTGTGAACGAACGATGGATTTA
AATAAATCGTCACTGTTTTTAtattctgaatgattgttttaacGGTCACG
CTCACGcatatatcaattatatattgGTTagatgcataaccaggtaggtc
cataaaagtatcgcttattaatattttttcgaCATTGACTGTTTTGACTA
TGAAGAGACAAGACATACGCGAGAAAGTTATATTCTTATTAGTCAGCCAC
AAAAGGATTTTATCCACTCTTCAAAATGGCCGCTAACTAAATATCCATTt
tagagaattttatttttctcttgatTTGATAAAGAAAGCAGCAAGAGAAA
CTTTTCCCTTTAAATGGAGCTGTCCGCCTTTTTAAATTGCCTATCTGCAA
ATAATTTTAACTAATATCATGTTTCTTAGACTTGGACAGAGCTAATGACG
AATATTGGATGAATTTGTGGTCGAACAATAATAGTGAGATTTTTCAATAA
TATTCTTCACAGTGTTGTTCATTTTTTCTAATTCTTGAATATTTCCATTC
GTAATGATAaatcctttctttctttctgtatttatttatttatttattaa
ttaaaGGATTGAGGTTCAAGGCACGCCGTTGGATCTAAG

Coding sequence (CDS) from alignment at sc0000131_pilon:229789..233477+

>MSTRG.15099.2.p1 ID=MSTRG.15099.2.p1|Name=MSTRG.15099.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1785bp|location=Sequence derived from alignment at sc0000131_pilon:229789..233477+ (Clytia hemisphaerica_ch_hm2_pilon)
attcttgatTTTAGTATAGATAAAATTGTAATCACTGTCAGCTATATTTG
GCATCAGAAAATTCATCATCAAATtcgaattgaaattgaaatccaGACTT
TCAAAGATATGGCCAATAATTACGCAAGAGGAGCTCCTGCCAATGTTCAA
GAAGAGGAACATCAACAGCCTTTGGCAGCAGACTTGGACAGAGCCAATGA
CGAATATTGGATGAATTTGTGGTCGAACAATAATAGAGCTCCTGCCAATG
TTCAAGAAGAGGAACATCAGCAGCCTTTGGCAGCAGACTTGGACAGAGCT
AATGACGAATATTGGATGAATTTGTGGTCGAACAATAATAGTGAGATTTT
TCAATAAattcttgatTTTAGTATAGATAAAATTGTAATCACTGTCAGCT
ATATTTGGCATCAGAAAATTCATCATCAAATtcgaattgaaattgaaatc
caGACTTTCAAAGATATGGCCAATAATTACGCAAGAGGAGCTCCTGCCAA
TGTTCAAGAAGAGGAACATCAACAGCCTTTGGCAGCAGACTTGGACAGAG
CCAATGACGAATATTGGATGAATTTGTGGTCGAACAATAATAGAGCTCCT
GCCAATGTTCAAGAAGAGGAACATCAGCAGCCTTTGGCAGCAGACTTGGA
CAGAGCTAATGACGAATATTGGATGAATTTGTGGTCGAACAATAATAGTG
AGATTTTTCAATAAattcttgatTTTAGTATAGATAAAATTGTAATCACT
GTCAGCTATATTTGGCATCAGAAAATTCATCATCAAATtcgaattgaaat
tgaaatccaGACTTTCAAAGATATGGCCAATAATTACGCAAGAGGAGCTC
CTGCCAATGTTCAAGAAGAGGAACATCAACAGCCTTTGGCAGCAGACTTG
GACAGAGCCAATGACGAATATTGGATGAATTTGTGGTCGAACAATAATAG
AGCTCCTGCCAATGTTCAAGAAGAGGAACATCAGCAGCCTTTGGCAGCAG
ACTTGGACAGAGCTAATGACGAATATTGGATGAATTTGTGGTCGAACAAT
AATAGTGAGATTTTTCAATAAattcttgatTTTAGTATAGATAAAATTGT
AATCACTGTCAGCTATATTTGGCATCAGAAAATTCATCATCAAATtcgaa
ttgaaattgaaatccaGACTTTCAAAGATATGGCCAATAATTACGCAAGA
GGAGCTCCTGCCAATGTTCAAGAAGAGGAACATCAACAGCCTTTGGCAGC
AGACTTGGACAGAGCCAATGACGAATATTGGATGAATTTGTGGTCGAACA
ATAATAGAGCTCCTGCCAATGTTCAAGAAGAGGAACATCAGCAGCCTTTG
GCAGCAGACTTGGACAGAGCTAATGACGAATATTGGATGAATTTGTGGTC
GAACAATAATAGTGAGATTTTTCAATAAattcttgatTTTAGTATAGATA
AAATTGTAATCACTGTCAGCTATATTTGGCATCAGAAAATTCATCATCAA
ATtcgaattgaaattgaaatccaGACTTTCAAAGATATGGCCAATAATTA
CGCAAGAGGAGCTCCTGCCAATGTTCAAGAAGAGGAACATCAACAGCCTT
TGGCAGCAGACTTGGACAGAGCCAATGACGAATATTGGATGAATTTGTGG
TCGAACAATAATAGAGCTCCTGCCAATGTTCAAGAAGAGGAACATCAGCA
GCCTTTGGCAGCAGACTTGGACAGAGCTAATGACGAATATTGGATGAATT
TGTGGTCGAACAATAATAGTGAGATTTTTCAATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.15099MSTRG.15099Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.15099.2.p1MSTRG.15099.2.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.15099.2.p1.exon1MSTRG.15099.2.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.15099.2.p1.exon2MSTRG.15099.2.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.15099.2.p1.exon3MSTRG.15099.2.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.15099.2.p1.exon4MSTRG.15099.2.p1.exon4Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.15099.2.p1.exon5MSTRG.15099.2.p1.exon5Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000131_pilongenomesc0000131_pilon:229789..233477 +