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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000131_pilon:228..3187+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.15089.1.p1 ID=MSTRG.15089.1.p1|Name=MSTRG.15089.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2960bp|location=Sequence derived from alignment at sc0000131_pilon:228..3187+ (Clytia hemisphaerica_ch_hm2_pilon)
tttttttACTCTTCAGATTTTATCCATGATCGAGGAAGCAGCCGGTACGA
GAATGTATGAAAGTAAAAAGCAACAAGCCATTAAAACTATGGAAAAGAAA
CAAAGCAAACTCAATGACATCGAAGCTGTAAGACATTTAGAATACCGTAG
AATCTCTAAACTTTCTCAATCCCGGCTGAACATCCCTGGGATTTTCCCGC
TCCTTTTCCGGGACATAatggcaaaaaagatttttttgctgCGTACAAAT
GCGTGGACCTTACAACCTGGCACTGATCGCCCAACACATTGAAGTCACTT
TTTACCTTCCCAGAGTCTTGGTCTCTTTCCATTGTAAAGTGGAAATAGAA
AAGTTTAGCCATCCTAAGGTTCTCTAACCTACTTTAAACTCTCTTATTAA
GGCATACGCCTTTTACCAAGCTTTCTACATAACAAAGTTTTCAAACCCtg
gtaaaatatttctttaatttagaTGTAGTTACATACCTTACATACACTAC
CTATCCGCTTGCATAGGTAGACTAATGTTTACTCTTTGTACATAAACAGG
TACTTAATGAGGAGATTACACCGACCatcaaaaagttgaaggaagaaCGT
TCGTCTTATTTAGAATACCAGAAAGTGATGAGGGTTATTGAGCATCTCAC
CAGACTTTATGTGGCTTACGAATTCACTAAAGCCGAGGTTAGTTCATGGA
TCTGTATGGattatttttacaaattctCTTCCGAGCACTAAAGGGCTTTC
GCTGATTCGAACTTCAGAAATTCGAAACTTTTTATACATAGTTCTAGACT
TAATCAGATCAAAGACTTTTTATCCAACCCCAATATccagttttttttat
tctagGGTAGTTATGCCAAATTCTTTAATCCCACCTAGGAAATTCTctta
aaaatactttctatgTTCGACAATTGTCCCTCTGTAAATCAAGCAGCCTT
TctcgaattagtgagagtcaGATTTGAGTATAGTATCCGGAAAAACTATA
TACAAACTGTCACTATATTCGGTCTCGAGCGCCGtagcaaatttttttcc
gtaagcgGCCCAAGCCCTCGTTTAGCGGCCCAAGACCTGAATTACCGGCC
CAAGACCTGGGAAACTTTGTAACTTTTGAGACTTGCTTTTTTGCCAtgat
tttagaatttatagTGGTCCCAGACCTGAATTATCGGCCTAAAGAGTTCT
AAAAAACTAGTAGAACACATTCATTAGAAGATCATCAAATTGAAGTACTT
TTCCATAAGAATATAACGGTTCGTTTAtcctctttttccaaaaaagcaag
tctcaaaaatttcaaagtttcccAGGTCTTGGGCCGGTAATTCAGGTCTT
AGGCAGCTAAATGAGGGCTTGGGccgcttacggaaaaaaaatttgcaacg
cCGTGATTCCTACTTCTTCATGGATAGGACCCATTCCGAACGCATTCGGA
GCACTCGTCATATCTTTATATTAGTTAATTTCGAAGACGTCTTGTTTTCA
AAGCTTTTGTCAAAACTCAACCTAATGAAGTGTATAGTGATGTCATTCTT
TTATGTTTCCTTGACTCCTTTATTTTAGACGGCGGACTTTCTGGCCTGCT
TATTCctattgttagagtaggcagttTGCATAAAATTGCctgtttgaaaa
aatatttgcttCGAAAAGGTTAGAAGAAGTTATTACATTGACGACGTCAA
ACGAGGGCAATTTGCATTGATTTTGGATGTCCGACTTTCTATTTTactca
caattagaatagacagggaAAGCATGGCTAAGTCTCCCATGCCCTAACGT
ACAACTGAACACGATCTTTTAATCATTTATTCAGGAATTCAAAGAGAAAG
CAGGTTCAGAACTCGAGAAAATGAACGAGGCTATTTCAACACTGAGTGCT
CGCAACCAAGAAGTATGTattatcaattttttcttttaaatcgaTCTCTG
AATATAGGTATACCAATATCTTTTAAAACTATTTctaaaagtatcaaaaa
atcaTTACATCAAAGCTGCCATATTTATTTCAAGTCTCTGAAGACTAACG
AAGTCAGTCAGTCTGTCACctgaaaactttggggcaggctggagacttca
aaaattatccgatttggctgaaatttgtaCACCtgatccttgggtgaatc
cctctgggtgatttttcaatttttgaaaattttgattttcagtggCGTGG
TCACGaattttagcctcaaaacgaggctaaaaactttggggcaggctgtg
agatttcaaaaattgtctgattcggctgaaatttttcacacttgttcctt
gggtgaatatcctggggtgttatttttttcattttttaaaaattttgatt
tttgggggcGTGGTAGAGTCGATATttaacgtggatagcccagtaatcta
ggacttttaggcagTCTTTAGATTGTTTTCatggggtccacggccagcca
gCTCGGCTATCTATTAAGGAAGGAGCGGGTATTAGAACCGCAAATCCCTG
GTTTGatacgctgacgcctttgaccacttggccgtCGCTCAcgagtttta
gcctcaaaacaAAGCTAGAAACTTCGGGGCAGGCTGCAGACTTCACAAAT
TGTctgattgggctgaaattttgcacttgttccttgggtaaatatcgggg
ggtaattttttcatttatttcaaaattttgaatttttgaggcGTGGCCAC
AACtttttcgccaaaacaagactaaaactgttcttttatcaaaaatttca
tttttcaatttatttttcaatttatttttttatttttacaattggACCTT
CGAGTAATTTaaaaaatactgaagttgagccagtgcagttagcacgttcg
acagttaaACTACAGTTCACTGTAttcatttttgtgtttttagatCAGTA
AAGAAATTGCAAGGATTGACGGAGAAATCGACGAATTGCAACGGAAGAAA
GACGAGGTAA Coding sequence (CDS) from alignment at sc0000131_pilon:228..3187+ >MSTRG.15089.1.p1 ID=MSTRG.15089.1.p1|Name=MSTRG.15089.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1632bp|location=Sequence derived from alignment at sc0000131_pilon:228..3187+ (Clytia hemisphaerica_ch_hm2_pilon)
ttttttACTCTTCAGATTTTATCCATGATCGAGGAAGCAGCCGGTACGAG
AATGTATGAAAGTAAAAAGCAACAAGCCATTAAAACTATGGAAAAGAAAC
AAAGCAAACTCAATGACATCGAAGCTGTACTTAATGAGGAGATTACACCG
ACCatcaaaaagttgaaggaagaaCGTTCGTCTTATTTAGAATACCAGAA
AGTGATGAGGGTTATTGAGCATCTCACCAGACTTTATGTGGCTTACGAAT
TCACTAAAGCCGAGGAATTCAAAGAGAAAGCAGGTTCAGAACTCGAGAAA
ATGAACGAGGCTATTTCAACACTGAGTGCTCGCAACCAAGAAatCAGTAA
AGAAATTGCAAGGATTGACGGAGAAATCGACGAATTGCAACGGAAGAAAG
ACGAGGTAttttttACTCTTCAGATTTTATCCATGATCGAGGAAGCAGCC
GGTACGAGAATGTATGAAAGTAAAAAGCAACAAGCCATTAAAACTATGGA
AAAGAAACAAAGCAAACTCAATGACATCGAAGCTGTACTTAATGAGGAGA
TTACACCGACCatcaaaaagttgaaggaagaaCGTTCGTCTTATTTAGAA
TACCAGAAAGTGATGAGGGTTATTGAGCATCTCACCAGACTTTATGTGGC
TTACGAATTCACTAAAGCCGAGGAATTCAAAGAGAAAGCAGGTTCAGAAC
TCGAGAAAATGAACGAGGCTATTTCAACACTGAGTGCTCGCAACCAAGAA
atCAGTAAAGAAATTGCAAGGATTGACGGAGAAATCGACGAATTGCAACG
GAAGAAAGACGAGGTAttttttACTCTTCAGATTTTATCCATGATCGAGG
AAGCAGCCGGTACGAGAATGTATGAAAGTAAAAAGCAACAAGCCATTAAA
ACTATGGAAAAGAAACAAAGCAAACTCAATGACATCGAAGCTGTACTTAA
TGAGGAGATTACACCGACCatcaaaaagttgaaggaagaaCGTTCGTCTT
ATTTAGAATACCAGAAAGTGATGAGGGTTATTGAGCATCTCACCAGACTT
TATGTGGCTTACGAATTCACTAAAGCCGAGGAATTCAAAGAGAAAGCAGG
TTCAGAACTCGAGAAAATGAACGAGGCTATTTCAACACTGAGTGCTCGCA
ACCAAGAAatCAGTAAAGAAATTGCAAGGATTGACGGAGAAATCGACGAA
TTGCAACGGAAGAAAGACGAGGTAttttttACTCTTCAGATTTTATCCAT
GATCGAGGAAGCAGCCGGTACGAGAATGTATGAAAGTAAAAAGCAACAAG
CCATTAAAACTATGGAAAAGAAACAAAGCAAACTCAATGACATCGAAGCT
GTACTTAATGAGGAGATTACACCGACCatcaaaaagttgaaggaagaaCG
TTCGTCTTATTTAGAATACCAGAAAGTGATGAGGGTTATTGAGCATCTCA
CCAGACTTTATGTGGCTTACGAATTCACTAAAGCCGAGGAATTCAAAGAG
AAAGCAGGTTCAGAACTCGAGAAAATGAACGAGGCTATTTCAACACTGAG
TGCTCGCAACCAAGAAatCAGTAAAGAAATTGCAAGGATTGACGGAGAAA
TCGACGAATTGCAACGGAAGAAAGACGAGGTA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000131_pilon | genome | sc0000131_pilon:228..3187 + |
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