MSTRG.15082.2.p1 (mRNA) -

Overview
NameMSTRG.15082.2.p1
Unique NameMSTRG.15082.2.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000130_pilon:880940..882368+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.15082.2.p1 ID=MSTRG.15082.2.p1|Name=MSTRG.15082.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1429bp|location=Sequence derived from alignment at sc0000130_pilon:880940..882368+ (Clytia hemisphaerica_ch_hm2_pilon)
gagaattaaaaaaagtaaaacttgaTGAACATGGCTGATTCTTTATCTCA
ACTTTTCGAGTAAGTTTTGTTTACTATTGTTATAAACAactgattttttt
atcaaagaaaagGTCAAATTGGATTGATgaaccaacattttttaaagtcC
AGCTGGTATAGGAATATTGATAATAATAAACTATTAAATGAATCAAATAA
TTGGTAACAATGCCTTTCATCGATAATTTCAATTGACACTACCTTAGTTT
AGACATTTGGCATGATCTAAACATTTAAACTAGATTCTTGAAACAAAGAT
TCTCCTGAAATTAATGCTTAATCTTTGTATCTAATTTGATTTTAGATTTG
TCGACAACAACAAGGTATGCATTCAAAATTTACTTTCGATCTGTTAGTtt
gaaagtcaaaataaaagaaataaactcTCAAATCTGATTGGAATATTAGA
AATGAGacacttttttaataagatGCCCTTTTAGTGTCCAGTTATTGGGT
GCAGCCCCTCCTGGACTCTTTTTGGACTCTTACAGAGACtcgattttctt
tttaatggttttttcaAAGGGGTTAAAAAGAGACTtttgagggtgtgaaa
aagggactcttatggctcgcacatacccgacatccattttgcctaagtac
ccccccccccccacaggAATGGACGCTACCGTGCCCGGCTGAGGTTATAA
ATACACCACATCTGACACTTTCAATTCTATGATCCTGATAatgaatattt
tcattattttctgtAGAAAAGCTACATTGAAGGGCTGAGAACATGggttg
aaatcgaaagtgtttcTGCAGAACCTGCTCGCAGACCCTATGTTTTCCAA
ATGATGGAGCAATGCAAAAAGGTAATGATAGGATTTCGAACTGTTTCagt
tctttttgaatttcattaccttctttttcatcattattttcaaattaaca
ATCCTTTAGCATTTGAGTTTGACTTAATAACATATAGTGGACAATCGTCA
GAGCTGCATAAATAAATTTAGATAAACTCTGCACAAAATATAAACTTCAG
AATCAATTTTGAACGTCGACTTCTCTTTATCATCACTTTAGCAACTCGAG
GATTTAGGTGCTAAAATCGAGTTAGCTGAAAACCCTCTCAACAAAGGAAA
GAAGGAAGGTGATCTCATGTTACCACGTATCATCTTGGGGAATCTCGGTG
ATGATccaaaaaagaagacactaTTAGTCTACGGGCATCTTGATGTTCAG
CCAGCAAACAGATCTGACGGTTGGGATTATGAGCCTTTCAAATTGACAGA
GACAGAGGATGGCAAACTTTACGGACGAGGGTCAACCGATGATAAGGGAC
CTGTTCTCGGTTGGATTAATGTTTTATCAGCATACCAAGCTCTGAAGATG
GAAATCCCTGTTAATCTAAAGGTTTATTA

Coding sequence (CDS) from alignment at sc0000130_pilon:880940..882368+

>MSTRG.15082.2.p1 ID=MSTRG.15082.2.p1|Name=MSTRG.15082.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=714bp|location=Sequence derived from alignment at sc0000130_pilon:880940..882368+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGGAGCAATGCAAAAAGCAACTCGAGGATTTAGGTGCTAAAATCGA
GTTAGCTGAAAACCCTCTCAACAAAGGAAAGAAGGAAGGTGATCTCATGT
TACCACGTATCATCTTGGGGAATCTCGGTGATGATccaaaaaagaagaca
ctaTTAGTCTACGGGCATCTTGATGTTCAGCCAGCAAACAGATCTGACGG
TTGGGATTATGAGCCTTTCAAATTGACAGAGACAGAGGATGGCAAACTTT
ACGGACGAGGGTCAACCGATGATAAGGGACCTGTTCTCGGTTGGATTAAT
GTTTTATCAGCATACCAAGCTCTGAAGATGGAAATCCCTGTTAATCTAAA
GGTTTATATGATGGAGCAATGCAAAAAGCAACTCGAGGATTTAGGTGCTA
AAATCGAGTTAGCTGAAAACCCTCTCAACAAAGGAAAGAAGGAAGGTGAT
CTCATGTTACCACGTATCATCTTGGGGAATCTCGGTGATGATccaaaaaa
gaagacactaTTAGTCTACGGGCATCTTGATGTTCAGCCAGCAAACAGAT
CTGACGGTTGGGATTATGAGCCTTTCAAATTGACAGAGACAGAGGATGGC
AAACTTTACGGACGAGGGTCAACCGATGATAAGGGACCTGTTCTCGGTTG
GATTAATGTTTTATCAGCATACCAAGCTCTGAAGATGGAAATCCCTGTTA
ATCTAAAGGTTTAT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.15082MSTRG.15082Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.15082.2.p1MSTRG.15082.2.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.15082.2.p1.exon1MSTRG.15082.2.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.15082.2.p1.exon2MSTRG.15082.2.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.15082.2.p1.exon3MSTRG.15082.2.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000130_pilongenomesc0000130_pilon:880940..882368 +