MSTRG.15067.1.p1 (mRNA) -

Overview
NameMSTRG.15067.1.p1
Unique NameMSTRG.15067.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000130_pilon:644232..648696-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.15067.1.p1 ID=MSTRG.15067.1.p1|Name=MSTRG.15067.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4465bp|location=Sequence derived from alignment at sc0000130_pilon:644232..648696- (Clytia hemisphaerica_ch_hm2_pilon)
ATTGAGACTAACTTATCAACATATGAATAGTTCTACAACAAACTTACCTA
GATGTACAGGTGCAAATTTTTACCTTGATTGACCCAGTGGACTTAAAGAT
ATTGTCAATAATATAAATGTGGGTTTTGAGGTACGTATTCAAAAAAAGTG
AAAATTTTAAAAAGCAATGATATAAAAACAATCTAACATATAACATTGAA
AAATATCAGGAAGAACTCTTTTCATGGGACTCCTCGCACCATCAAACAAT
TTTCTTGATAAAGGCAGCCCAAAAAATAATTATTTAGGTCAGAAATTTAG
TGTGGGTTTTGCGGTACATATACCTGTACAAGTAAGTGATATTTATTAGC
TAGTAAAATGTCATGTATGTTTTAGTATCCCTAGTATGAATGTTTTTCAC
AATTATTTTTACAGGGTAGATCTGATATTCGAAATTAGATTTTCATTTTC
AGATTGATAGTAAATAGAATTATTGGAGAAAAAAATATGCCTTGGATTTT
GTAATTTTTCACCCCCTTTTCACAGACCCACTGGAAAAATGGCCAAAATA
TCGTCTCCAGTGGAAAATTATAGTTCAATTTTGTTCCCCCAGATAAACAA
ATCCTCACTGCGCTATTTTTTCCATCCCCACTGAATTTTTTAGCTCGAGA
TAAATGGAATTCAAATCCCCAGCCATTAGAAAACATGGGAGTTTTTATCC
GTTATTTTTACCCCCACTGGCTGAAAAAATCCTACTGGTTGCTGTGAGAA
GGGGTGTTATTATAGCTGATGCTACAAATATTCATATAGAATTTTGGTGT
ATACTTTGATCTACATAAATCTTTTAACTTTCTTTTTTCGATAACATAAT
AATTTTGTTGTTCTTTCAGGGTTTAGATTTAAGATATTGAAGGTAAAAAC
AATAAAAACGTCAAAATATTTTAAAAAACTAGATAAAAAATATTAGAATT
TAGTGATGACAACCCAAATTATCCCTGGAGCTCTGAGGGAGACGAATAAT
CCGTTACTTCTTAAGGTAAAATTGTTTTCATTAAGTTTGATATGAAAATG
GTATGTTACCTTAAAAGTGGATAAATTTTCGCGTGTAATAATTTTCGCGA
GACGAGAATTTAAAGATTTCGCGTGGATTAAATTTCGCGAAAATGGCCAA
AATTCGCGAAAACCGCGAAAATTAATCCACGCGAAAATTTATCCACTTAA
CGTATATTGTGAAAAAAGATCATCTGGTAGCATCCAATGCTCCCCAAATT
TCAAATGCAATTGACAGGAAGGCCATTTCATGAATGCTTGTTAGGGTTTA
AATAACGTCTTTTTATTGAACAGGTGCCTATCCTATTGATTTTGCAATAT
TCTGCTCATCAAGTTAACCTTTCTTATAGGCTGGCATAGGTAAACCTCAA
CCTCGCGGTTATTCCATACCTCCTGATAGTTTTGCTTATGGAAAGACGAA
CTGTGGTAAAAGTTATGGTGCCGGAGATAGTAAGTGATTCGATCGTATTT
ATATTAAGTCAAAATTCATCATTTTCAGTGCTATTTGGAGTAACCATTGT
GCACTTTGTTCTATGTCTTGAAAGATGATTTTAAATTCAAATGAGTTTTG
CAGGAATGGAGAAATTTAGTAAATAAGTACTTAAAGTTTTTCATCTTGTA
AAAATTATTTTTTCACTTCAGTTTTATAAAAAAGGTTTCTGAAAATTACG
AAATTTTACTATTTAGCATTCATTTGGCAGACCAAAATCAGGCCATTGAA
ATCTAGTGAAAAATCTGGAGAAAGAAGAGATTTTATCACGTTGAATAAAG
CAGCCACACAAGCCGGATTGGTCACCGCTCAAGAGCATTTCCAATACCGA
GCAACACATTCTAATGGTAATAAGCGCGGAGATAGTCGCCAAAAAACTGG
TGGTTTAGATTCAACCAAATTACCATTACTCTCTGATAGGGTGTTCGGTC
TTCCAACAAAGTGAGTTGTTTTTGCTTTTATATTTATGAGTTGAGAACTT
AAATTCAAAAATTCAAATTCATTTTAATAAGTGAGAAATTAAATTTAAAT
TCTTCCTGTCGCCATTCCATTCTACGCATAAATCATTTTCTCTAATTCAA
TTTTTTTATTTCCCACACTGTTAAAAAATATTTTTGAGATTAATAAATAC
ATTCGTAATACAAGACAGTAATCCAGTGTCTCGTGTATGCGATCGTTCTA
GCGGATAGAAGCGTAAACAAACCTAGGTATCTTACTCAGAAATTCGTATT
ATACCCTACTATCCCTCAGGTCTTAGATATTTATACATTAATGTCTATAA
GAATTTATATTTGCAGTTGTTTAACTTTGTGACTTTTCATATTTCTAAAG
ACATGGGCCGGCTTATGACTTTCTTGAACATAAATATCAAGACGACTGGC
TGTGTGAAAATCACCGTAATCAGTTGTCTGAAAAAAGAAAAGAACGAGAG
TTAAAGAAATGTGCCAGCCGAACTTACTCCGAAACATGTGCATCAAGATT
GAGAAGATATTCCCCCAAAGTTGATGAACGTCCACTCTGGCAAATGCCAA
GATTCAAAAATCACGTGAGTATCCTTCATTTGATTTAAGGTCCGCTGGGT
CGCTTTGCCTTTATTCCCTGTTCACTTCAATCTGAAGTTGGCCTGTGGTA
GCTACCTAGGAGATTTTGTGAGAAAGTAAAAATAAATGAAATAAGGATGC
AATGAAGGAGCTCCAAAAACAAAATGAAGTAAAAAAACTTCTTGCTTTTG
ACGGGTGGAGGTTCTAAATTTTAAAGTTTACAAATTCCTAAAATTCCTGA
AAACTCCAGAATTCATCATACTGGTGATAAAGGATCATCGTAGTTTCCAA
AAAGGTTTTATCCTTTTTTTTCTGGGAACGAATTCTCACCAAATTTTCTA
ACGGGTCTTTGACATAAAGTTTGTTTTAAGACAGAGAACTGAAATATTTG
ATTACAGGGGTGTAAGTATACGTAATAGTTATCGGGCAGTTGCGAGTACG
ATATGAAAAAATGTTTTACGAGCTCCGAGATTTTTCCGTACAATATTTAC
GTTAAAATACACGGAAAATCCGGAATGAGTGAAATATTTCCATATTGTAC
GAGCAAATGTCTGAACTGGTTTATCCGTGACCCAAAAAAATGCACTTTTT
GGAAAAAAAGCGCGGGACACTTTTGTAGAAAAGTGACGTTAGATTGCTTC
TACCGCTACAATGCAACAACATATTTTCGTCAATTTATATTTTGTACATG
TAAAATAAAAGATATATTGTACTCTTTTTAACCAATCAGATTGCTGATAT
TTTTTGGATCGCCGATACATGAAATTCTCATTTAACTACGTTTTATTTCA
ATCAGGCTAAACCCAAACTTCAAACATTTCGAAGTGAAGAAGCACGCACG
AAAGCCTTTGAACATCACATTAGTGATTCTACATCTCGCACTGGTGTCAT
AGGACATGGTATCTATGAAGATGCAAAAAGCTAGTAATTCCTTCATCCTT
CCAATTTTTGTCGTAAATGTAGTATAGAAGATTCTTATTTTCATATTAGT
GATTTGACAGTTTTTTTTAAATGAATATATTTTTTAAGTATAATTATAAT
TTTGGGGATAATTTTTTTAATAACCAAGGTGAGAATATCTCTAGTCAAAA
GAGCTTTTTTGTGCGAGTTGGTTTGTCTCAGAAAAATCAGTTTGTACAAA
ATGATTAATCAATTGGCCGGTTACAGCCGACCAGGCGATCATGTATGGTA
AAAATAATGAAAACGGGCATACCAAATTTCGCACCAGGGTAACTTCCATC
ATTTTATATAAGTTTACAGCTGGATATGGTAAAATCCTTCGTGGACACCA
CATACTAGCTAATAAATCTAAAAGATTTCTAGAAGCGAATTTTAAAGCGA
CTGGACACGAGTTTGATCGGTTGTCAAACAACCCAAACGATCTTGGTAAA
ATACCGTAATATTGTGTGATCTGAGGTGTGATCGTTAACAATCCATCATA
CCTACCATAAAAGCCGGTCTCCACCTGCGCGCGCTGCGCTTGCATCTTTT
GTCTTCAATCATTATTGCTTGGAAAAAAGATTATGTCATAAAAATGTAGC
GTGCGCTCGAAAAAATTTGAACACATTTCAACTCTTTTCAACCGTTACGT
CAGATTGCGCCAATGGAATGCTTCACTTTTCTTCTGACCAATAGCGTGGG
GGCTTTGCTCAAACAAGTGCGATCGCAACGCGCGCAAGTGGAGACCGGCC
TTAAATTACTTGGCTCAGACAAGTCTCTTCATCAACAACGATCCTCTCAG
AGCTTTTCTCGAACCTTTGACAGTATAACCTCAATAATATTTCAAATAAT
AATATTATTTTTGTATTTTTATATTTTGTACATATGATTAAATTGAATGA
TCCTAAAGATAATATATGATTTGATAACAATTTAGAATCGTTTCTGTTCA
ATTTTTAGTTTGAAT

Coding sequence (CDS) from alignment at sc0000130_pilon:644232..648696-

>MSTRG.15067.1.p1 ID=MSTRG.15067.1.p1|Name=MSTRG.15067.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3735bp|location=Sequence derived from alignment at sc0000130_pilon:644232..648696- (Clytia hemisphaerica_ch_hm2_pilon)
GCTAAACCCAAACTTCAAACATTTCGAAGTGAAGAAGCACGCACGAAAGC
CTTTGAACATCACATTAGTGATTCTACATCTCGCACTGGTGTCATAGGAC
ATGGTATCTATGAAGATGCAAAAAGCTAGACATGGGCCGGCTTATGACTT
TCTTGAACATAAATATCAAGACGACTGGCTGTGTGAAAATCACCGTAATC
AGTTGTCTGAAAAAAGAAAAGAACGAGAGTTAAAGAAATGTGCCAGCCGA
ACTTACTCCGAAACATGTGCATCAAGATTGAGAAGATATTCCCCCAAAGT
TGATGAACGTCCACTCTGGCAAATGCCAAGATTCAAAAATCACCATTCAT
TTGGCAGACCAAAATCAGGCCATTGAAATCTAGTGAAAAATCTGGAGAAA
GAAGAGATTTTATCACGTTGAATAAAGCAGCCACACAAGCCGGATTGGTC
ACCGCTCAAGAGCATTTCCAATACCGAGCAACACATTCTAATGGTAATAA
GCGCGGAGATAGTCGCCAAAAAACTGGTGGTTTAGATTCAACCAAATTAC
CATTACTCTCTGATAGGGTGTTCGGTCTTCCAACAAAGCTGGCATAGGTA
AACCTCAACCTCGCGGTTATTCCATACCTCCTGATAGTTTTGCTTATGGA
AAGACGAACTGTGGTAAAAGTTATGGTGCCGGAGATAATGACAACCCAAA
TTATCCCTGGAGCTCTGAGGGAGACGAATAATCCGTTACTTCTTAAGGCT
AAACCCAAACTTCAAACATTTCGAAGTGAAGAAGCACGCACGAAAGCCTT
TGAACATCACATTAGTGATTCTACATCTCGCACTGGTGTCATAGGACATG
GTATCTATGAAGATGCAAAAAGCTAGACATGGGCCGGCTTATGACTTTCT
TGAACATAAATATCAAGACGACTGGCTGTGTGAAAATCACCGTAATCAGT
TGTCTGAAAAAAGAAAAGAACGAGAGTTAAAGAAATGTGCCAGCCGAACT
TACTCCGAAACATGTGCATCAAGATTGAGAAGATATTCCCCCAAAGTTGA
TGAACGTCCACTCTGGCAAATGCCAAGATTCAAAAATCACCATTCATTTG
GCAGACCAAAATCAGGCCATTGAAATCTAGTGAAAAATCTGGAGAAAGAA
GAGATTTTATCACGTTGAATAAAGCAGCCACACAAGCCGGATTGGTCACC
GCTCAAGAGCATTTCCAATACCGAGCAACACATTCTAATGGTAATAAGCG
CGGAGATAGTCGCCAAAAAACTGGTGGTTTAGATTCAACCAAATTACCAT
TACTCTCTGATAGGGTGTTCGGTCTTCCAACAAAGCTGGCATAGGTAAAC
CTCAACCTCGCGGTTATTCCATACCTCCTGATAGTTTTGCTTATGGAAAG
ACGAACTGTGGTAAAAGTTATGGTGCCGGAGATAATGACAACCCAAATTA
TCCCTGGAGCTCTGAGGGAGACGAATAATCCGTTACTTCTTAAGGCTAAA
CCCAAACTTCAAACATTTCGAAGTGAAGAAGCACGCACGAAAGCCTTTGA
ACATCACATTAGTGATTCTACATCTCGCACTGGTGTCATAGGACATGGTA
TCTATGAAGATGCAAAAAGCTAGACATGGGCCGGCTTATGACTTTCTTGA
ACATAAATATCAAGACGACTGGCTGTGTGAAAATCACCGTAATCAGTTGT
CTGAAAAAAGAAAAGAACGAGAGTTAAAGAAATGTGCCAGCCGAACTTAC
TCCGAAACATGTGCATCAAGATTGAGAAGATATTCCCCCAAAGTTGATGA
ACGTCCACTCTGGCAAATGCCAAGATTCAAAAATCACCATTCATTTGGCA
GACCAAAATCAGGCCATTGAAATCTAGTGAAAAATCTGGAGAAAGAAGAG
ATTTTATCACGTTGAATAAAGCAGCCACACAAGCCGGATTGGTCACCGCT
CAAGAGCATTTCCAATACCGAGCAACACATTCTAATGGTAATAAGCGCGG
AGATAGTCGCCAAAAAACTGGTGGTTTAGATTCAACCAAATTACCATTAC
TCTCTGATAGGGTGTTCGGTCTTCCAACAAAGCTGGCATAGGTAAACCTC
AACCTCGCGGTTATTCCATACCTCCTGATAGTTTTGCTTATGGAAAGACG
AACTGTGGTAAAAGTTATGGTGCCGGAGATAATGACAACCCAAATTATCC
CTGGAGCTCTGAGGGAGACGAATAATCCGTTACTTCTTAAGGCTAAACCC
AAACTTCAAACATTTCGAAGTGAAGAAGCACGCACGAAAGCCTTTGAACA
TCACATTAGTGATTCTACATCTCGCACTGGTGTCATAGGACATGGTATCT
ATGAAGATGCAAAAAGCTAGACATGGGCCGGCTTATGACTTTCTTGAACA
TAAATATCAAGACGACTGGCTGTGTGAAAATCACCGTAATCAGTTGTCTG
AAAAAAGAAAAGAACGAGAGTTAAAGAAATGTGCCAGCCGAACTTACTCC
GAAACATGTGCATCAAGATTGAGAAGATATTCCCCCAAAGTTGATGAACG
TCCACTCTGGCAAATGCCAAGATTCAAAAATCACCATTCATTTGGCAGAC
CAAAATCAGGCCATTGAAATCTAGTGAAAAATCTGGAGAAAGAAGAGATT
TTATCACGTTGAATAAAGCAGCCACACAAGCCGGATTGGTCACCGCTCAA
GAGCATTTCCAATACCGAGCAACACATTCTAATGGTAATAAGCGCGGAGA
TAGTCGCCAAAAAACTGGTGGTTTAGATTCAACCAAATTACCATTACTCT
CTGATAGGGTGTTCGGTCTTCCAACAAAGCTGGCATAGGTAAACCTCAAC
CTCGCGGTTATTCCATACCTCCTGATAGTTTTGCTTATGGAAAGACGAAC
TGTGGTAAAAGTTATGGTGCCGGAGATAATGACAACCCAAATTATCCCTG
GAGCTCTGAGGGAGACGAATAATCCGTTACTTCTTAAGGCTAAACCCAAA
CTTCAAACATTTCGAAGTGAAGAAGCACGCACGAAAGCCTTTGAACATCA
CATTAGTGATTCTACATCTCGCACTGGTGTCATAGGACATGGTATCTATG
AAGATGCAAAAAGCTAGACATGGGCCGGCTTATGACTTTCTTGAACATAA
ATATCAAGACGACTGGCTGTGTGAAAATCACCGTAATCAGTTGTCTGAAA
AAAGAAAAGAACGAGAGTTAAAGAAATGTGCCAGCCGAACTTACTCCGAA
ACATGTGCATCAAGATTGAGAAGATATTCCCCCAAAGTTGATGAACGTCC
ACTCTGGCAAATGCCAAGATTCAAAAATCACCATTCATTTGGCAGACCAA
AATCAGGCCATTGAAATCTAGTGAAAAATCTGGAGAAAGAAGAGATTTTA
TCACGTTGAATAAAGCAGCCACACAAGCCGGATTGGTCACCGCTCAAGAG
CATTTCCAATACCGAGCAACACATTCTAATGGTAATAAGCGCGGAGATAG
TCGCCAAAAAACTGGTGGTTTAGATTCAACCAAATTACCATTACTCTCTG
ATAGGGTGTTCGGTCTTCCAACAAAGCTGGCATAGGTAAACCTCAACCTC
GCGGTTATTCCATACCTCCTGATAGTTTTGCTTATGGAAAGACGAACTGT
GGTAAAAGTTATGGTGCCGGAGATAATGACAACCCAAATTATCCCTGGAG
CTCTGAGGGAGACGAATAATCCGTTACTTCTTAAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.15067MSTRG.15067Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.15067.1.p1MSTRG.15067.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.15067.1.p1.exon5MSTRG.15067.1.p1.exon5Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.15067.1.p1.exon4MSTRG.15067.1.p1.exon4Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.15067.1.p1.exon3MSTRG.15067.1.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.15067.1.p1.exon2MSTRG.15067.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.15067.1.p1.exon1MSTRG.15067.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000130_pilongenomesc0000130_pilon:644232..648696 -