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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000130_pilon:616971..618970- Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.15064.1.p1 ID=MSTRG.15064.1.p1|Name=MSTRG.15064.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2000bp|location=Sequence derived from alignment at sc0000130_pilon:616971..618970- (Clytia hemisphaerica_ch_hm2_pilon)
CAAATAGTCTTACAGATCGCATACGTATAGTCACAATAAACGATGCTCCG
TATACTTTCGTTGATGGCAAATTTTACGACGCCGATAATGATATGTGTTC
CGATGGTTTCTTATGTCAAATTCCGATACAAACGGATAGTTCCGGGCAAC
TTAATTACCAAAAGTCTTGTTGTATCGGTTTCATACCGGATATTTTCCGC
ATGGTCATAAAGAACGTTGCTATACCGTTCGAAATGTACGTTGTTGCGGA
CGGGAAGTATGGCGGATTCAAGAACGGTACGTGGAATGGAATGATCGCGG
ATGTTGCTTACGGGAAAGCGGACATGGCGATGGCTGCCATCACCATCACG
AAAGAACGGTCAGATTCTGTATCATTTAGCGCCCCATTCATGTTCGACCA
AACGGGAATCATAACAAAACCAGCAGTGGTTGAACTGGATTTTTTGAATT
GGGAGTTTTTGGCGCCTCTTTCCAAAGAGCTTCAAATTTATCTAGTGATT
TTGGTTGTGGTTTGTATGCTGTTGCTTTACTTCTTTGAAAATACAATATA
CTTTTACATTTATCACCACCATGGGTTCAGTCATAAAGCGTATTACTCAT
TCCTCGAAGGACTTTCTCACATCTCTGGTGTAACTTTACAAAGAGATCTT
GGCGGGAAACATCCTTTATGCCCAGCCGCCCGTATCATGTGTTTGTTTTT
CGCTATTGGGATGGTAATCATTGTTTCGACTTACACAGCCGTTTTGGCAG
CACAAAGTTTGAAGAGTAAAGAGAGAGAGCCTTTGCAAGGAGGATCACAA
GATGTTAGAGTGAGTATTTTTATTCTAGTGAGATTTTGTCCTTTCTTTCC
ACTTTCAAGAAGTGGTGTAAAATTATTTTTCACTATGAGAGAAACCTATT
TGGTCAGCTTATTCAGCTTATCAGAGGTTTCAAAAATGAATGAAATTATG
AAAGTGGTCAAATTTACTGTATCATAAACTTATCGTTTGAACCGTCACCG
TGAATTTGTTCACTTAGCTAAATATAAGCTTTAGAGAAAATACGTATTTC
CATATTTTTCAGTTCCGGAATCCAACCAACGAATTCCGATTCGGTATATT
ACGTGATAGCTCATACGAATCTTTTTTCAAAAACGGGGAAACGGATTTAC
TAAAACGGATGAGTGTGTTCATGGAACCGTACAATTATGACACCCTTGCT
GAGGGTATGGATATGGTGCGAAATGGGTGTGTATACTAATATGAATAGCA
AATTTCCACTATATCTTTATAGTAGTAGTCGAGTTATGGAGTAAGATTTA
TAAGGTATGGTTAAGTGAAGTGAAGAGAAAATTTGTTCGAGTTAGGGAGA
CATTCGAGTTAAAGAGGTCGGCCTTAATTCAACCACAAAATCATGATGTG
TAAGTATTTTACTGTATTTACGACTAAAGCATTATCATTTTGAATTAAAA
CGTTCATCGATATTTCTTTCAGGACTTTGCAAGCTTCATTCAGTGATTTC
GCTTTCCTGCATTTCTATTTATCAAAAGATCGTTCATGTCAACTCAAATT
GGTCAAAGATAAACTCTACTCCTTTGGCCTTGGGTTCCCAATGGCGAAAG
ATTTTCCTTATCGAGAGCTGATTAATCAAGGCATTTTGAAATTTACCAGT
AAAGACATGATAGCAGAGTTACAGGCCAAATGGTTCGATAATATTTGCCA
ACCGAATTTTTTTGTGACAAGCAATACGCAACTTTCGATTAAATTTTTTG
GTGGTTTGGTATTCATACTAGCGATGACGATTATTGGAGCTTTGTTGTTT
CTGTACCCAGAACATTTGTGGTGGAAATATTTTCATGAGAAAGTCTTGAA
ACTGATGAAAAGGAAGATTTTGAAAAGTGAATTGAAAAGTCCGGTGACGT
AAAAATTGTCGTGGAAGATTTTAAACTGGAAATTTAATTTCTGAAAGACA
ATAGACCTTTTCATAAATTACGAACATCACTTGCCTCGCATTCAAACAAT
Coding sequence (CDS) from alignment at sc0000130_pilon:616971..618970- >MSTRG.15064.1.p1 ID=MSTRG.15064.1.p1|Name=MSTRG.15064.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4203bp|location=Sequence derived from alignment at sc0000130_pilon:616971..618970- (Clytia hemisphaerica_ch_hm2_pilon)
GACTTTGCAAGCTTCATTCAGTGATTTCGCTTTCCTGCATTTCTATTTAT
CAAAAGATCGTTCATGTCAACTCAAATTGGTCAAAGATAAACTCTACTCC
TTTGGCCTTGGGTTCCCAATGGCGAAAGATTTTCCTTATCGAGAGCTGAT
TAATCAAGGCATTTTGAAATTTACCAGTAAAGACATGATAGCAGAGTTAC
AGGCCAAATGGTTCGATAATATTTGCCAACCGAATTTTTTTGTGACAAGC
AATACGCAACTTTCGATTAAATTTTTTGGTGGTTTGGTATTCATACTAGC
GATGACGATTATTGGAGCTTTGTTGTTTCTGTACCCAGAACATTTGTGGT
GGAAATATTTTCATGAGAAAGTCTTGAAACTGATGAAAAGGAAGATTTTG
AAAAGTGAATTGAAAAGTCCGGTGACGTAATTCCGGAATCCAACCAACGA
ATTCCGATTCGGTATATTACGTGATAGCTCATACGAATCTTTTTTCAAAA
ACGGGGAAACGGATTTACTAAAACGGATGAGTGTGTTCATGGAACCGTAC
AATTATGACACCCTTGCTGAGGGTATGGATATGGTGCGAAATGGAATAGT
CTTACAGATCGCATACGTATAGTCACAATAAACGATGCTCCGTATACTTT
CGTTGATGGCAAATTTTACGACGCCGATAATGATATGTGTTCCGATGGTT
TCTTATGTCAAATTCCGATACAAACGGATAGTTCCGGGCAACTTAATTAC
CAAAAGTCTTGTTGTATCGGTTTCATACCGGATATTTTCCGCATGGTCAT
AAAGAACGTTGCTATACCGTTCGAAATGTACGTTGTTGCGGACGGGAAGT
ATGGCGGATTCAAGAACGGTACGTGGAATGGAATGATCGCGGATGTTGCT
TACGGGAAAGCGGACATGGCGATGGCTGCCATCACCATCACGAAAGAACG
GTCAGATTCTGTATCATTTAGCGCCCCATTCATGTTCGACCAAACGGGAA
TCATAACAAAACCAGCAGTGGTTGAACTGGATTTTTTGAATTGGGAGTTT
TTGGCGCCTCTTTCCAAAGAGCTTCAAATTTATCTAGTGATTTTGGTTGT
GGTTTGTATGCTGTTGCTTTACTTCTTTGAAAATACAATATACTTTTACA
TTTATCACCACCATGGGTTCAGTCATAAAGCGTATTACTCATTCCTCGAA
GGACTTTCTCACATCTCTGGTGTAACTTTACAAAGAGATCTTGGCGGGAA
ACATCCTTTATGCCCAGCCGCCCGTATCATGTGTTTGTTTTTCGCTATTG
GGATGGTAATCATTGTTTCGACTTACACAGCCGTTTTGGCAGCACAAAGT
TTGAAGAGTAAAGAGAGAGAGCCTTTGCAAGGAGGATCACAAGATGTTAG
AGACTTTGCAAGCTTCATTCAGTGATTTCGCTTTCCTGCATTTCTATTTA
TCAAAAGATCGTTCATGTCAACTCAAATTGGTCAAAGATAAACTCTACTC
CTTTGGCCTTGGGTTCCCAATGGCGAAAGATTTTCCTTATCGAGAGCTGA
TTAATCAAGGCATTTTGAAATTTACCAGTAAAGACATGATAGCAGAGTTA
CAGGCCAAATGGTTCGATAATATTTGCCAACCGAATTTTTTTGTGACAAG
CAATACGCAACTTTCGATTAAATTTTTTGGTGGTTTGGTATTCATACTAG
CGATGACGATTATTGGAGCTTTGTTGTTTCTGTACCCAGAACATTTGTGG
TGGAAATATTTTCATGAGAAAGTCTTGAAACTGATGAAAAGGAAGATTTT
GAAAAGTGAATTGAAAAGTCCGGTGACGTAATTCCGGAATCCAACCAACG
AATTCCGATTCGGTATATTACGTGATAGCTCATACGAATCTTTTTTCAAA
AACGGGGAAACGGATTTACTAAAACGGATGAGTGTGTTCATGGAACCGTA
CAATTATGACACCCTTGCTGAGGGTATGGATATGGTGCGAAATGGAATAG
TCTTACAGATCGCATACGTATAGTCACAATAAACGATGCTCCGTATACTT
TCGTTGATGGCAAATTTTACGACGCCGATAATGATATGTGTTCCGATGGT
TTCTTATGTCAAATTCCGATACAAACGGATAGTTCCGGGCAACTTAATTA
CCAAAAGTCTTGTTGTATCGGTTTCATACCGGATATTTTCCGCATGGTCA
TAAAGAACGTTGCTATACCGTTCGAAATGTACGTTGTTGCGGACGGGAAG
TATGGCGGATTCAAGAACGGTACGTGGAATGGAATGATCGCGGATGTTGC
TTACGGGAAAGCGGACATGGCGATGGCTGCCATCACCATCACGAAAGAAC
GGTCAGATTCTGTATCATTTAGCGCCCCATTCATGTTCGACCAAACGGGA
ATCATAACAAAACCAGCAGTGGTTGAACTGGATTTTTTGAATTGGGAGTT
TTTGGCGCCTCTTTCCAAAGAGCTTCAAATTTATCTAGTGATTTTGGTTG
TGGTTTGTATGCTGTTGCTTTACTTCTTTGAAAATACAATATACTTTTAC
ATTTATCACCACCATGGGTTCAGTCATAAAGCGTATTACTCATTCCTCGA
AGGACTTTCTCACATCTCTGGTGTAACTTTACAAAGAGATCTTGGCGGGA
AACATCCTTTATGCCCAGCCGCCCGTATCATGTGTTTGTTTTTCGCTATT
GGGATGGTAATCATTGTTTCGACTTACACAGCCGTTTTGGCAGCACAAAG
TTTGAAGAGTAAAGAGAGAGAGCCTTTGCAAGGAGGATCACAAGATGTTA
GAGACTTTGCAAGCTTCATTCAGTGATTTCGCTTTCCTGCATTTCTATTT
ATCAAAAGATCGTTCATGTCAACTCAAATTGGTCAAAGATAAACTCTACT
CCTTTGGCCTTGGGTTCCCAATGGCGAAAGATTTTCCTTATCGAGAGCTG
ATTAATCAAGGCATTTTGAAATTTACCAGTAAAGACATGATAGCAGAGTT
ACAGGCCAAATGGTTCGATAATATTTGCCAACCGAATTTTTTTGTGACAA
GCAATACGCAACTTTCGATTAAATTTTTTGGTGGTTTGGTATTCATACTA
GCGATGACGATTATTGGAGCTTTGTTGTTTCTGTACCCAGAACATTTGTG
GTGGAAATATTTTCATGAGAAAGTCTTGAAACTGATGAAAAGGAAGATTT
TGAAAAGTGAATTGAAAAGTCCGGTGACGTAATTCCGGAATCCAACCAAC
GAATTCCGATTCGGTATATTACGTGATAGCTCATACGAATCTTTTTTCAA
AAACGGGGAAACGGATTTACTAAAACGGATGAGTGTGTTCATGGAACCGT
ACAATTATGACACCCTTGCTGAGGGTATGGATATGGTGCGAAATGGAATA
GTCTTACAGATCGCATACGTATAGTCACAATAAACGATGCTCCGTATACT
TTCGTTGATGGCAAATTTTACGACGCCGATAATGATATGTGTTCCGATGG
TTTCTTATGTCAAATTCCGATACAAACGGATAGTTCCGGGCAACTTAATT
ACCAAAAGTCTTGTTGTATCGGTTTCATACCGGATATTTTCCGCATGGTC
ATAAAGAACGTTGCTATACCGTTCGAAATGTACGTTGTTGCGGACGGGAA
GTATGGCGGATTCAAGAACGGTACGTGGAATGGAATGATCGCGGATGTTG
CTTACGGGAAAGCGGACATGGCGATGGCTGCCATCACCATCACGAAAGAA
CGGTCAGATTCTGTATCATTTAGCGCCCCATTCATGTTCGACCAAACGGG
AATCATAACAAAACCAGCAGTGGTTGAACTGGATTTTTTGAATTGGGAGT
TTTTGGCGCCTCTTTCCAAAGAGCTTCAAATTTATCTAGTGATTTTGGTT
GTGGTTTGTATGCTGTTGCTTTACTTCTTTGAAAATACAATATACTTTTA
CATTTATCACCACCATGGGTTCAGTCATAAAGCGTATTACTCATTCCTCG
AAGGACTTTCTCACATCTCTGGTGTAACTTTACAAAGAGATCTTGGCGGG
AAACATCCTTTATGCCCAGCCGCCCGTATCATGTGTTTGTTTTTCGCTAT
TGGGATGGTAATCATTGTTTCGACTTACACAGCCGTTTTGGCAGCACAAA
GTTTGAAGAGTAAAGAGAGAGAGCCTTTGCAAGGAGGATCACAAGATGTT
AGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000130_pilon | genome | sc0000130_pilon:616971..618970 - |
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