MSTRG.15062.1.p1 (mRNA) -

Overview
NameMSTRG.15062.1.p1
Unique NameMSTRG.15062.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000130_pilon:586847..589551-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.15062.1.p1 ID=MSTRG.15062.1.p1|Name=MSTRG.15062.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2705bp|location=Sequence derived from alignment at sc0000130_pilon:586847..589551- (Clytia hemisphaerica_ch_hm2_pilon)
ATTTTGTATATGTTAGAGAAGTGGGTCCAGATCTGATAAGAAATTTCATA
GACAATTTGAAACGACAGAGTCTAATTTTACAAGAAAAAATTATTGGAGT
GAATATTTTATTTGGCCTCCGATCAAAGCTTGCGTAATATTTCTGATTAA
ATGACTTTCAAAAAATGAATTTTTTGCAGGAGTTATTGTTTCTAATTATC
GCTTATAAGCTATTTCCAGTCGTTCAAACGGTGATTGATGATGGTGTATC
ATTAGCTGATAAGACCACGTACGCACATAACAAGGTCCGTTATTTACACG
CTGTCCAGGATATGGTATGGGATCAAGAATTAGCAGATAATTCGAAAGCG
TGGGCTGATTTATTAGCTTCAGAAAACAGTCTTCATCACTCTGAAGGCTC
CAAAATGGGAATGTATGGGGAAAATCTTTACAAAGGTTTCGATGGTTTCA
AAAATGAGAAAACTGTCGCAGATGCCGTTTATAATTGGTAAGGATTGTGT
TCCATGACTTTTGCAAGCACCCCTGTCTCAGTGATCCGTTGAGCGGCACA
AATCTGTGTGAAAAACCTTTTCTCAGGAGATATGCAAAATTGTCTTTCCC
AGTGACAGAGGAAGTGAATTCGCATTCTCTATCAAAATTTACAACCAATA
TTCCCACTGCATACTATTTTGAGAAAGACTTAAGATCATTTCAACTTCTT
TAAAGGTACATAGAAATCGAAGGGTACAATTTCAACGATCCAGCACCAGA
TTTGGATATCCATGGACATTTTACAGCGGTAAGTTTTTAAGATTGCAAAC
ATCCTAAACATCTCAGATACGTAAGGGGAAGACTATTCCAGTTGAAAATT
TTGAAAAAGATTAAATCGGCTCATAAAAAGAATTTTAGCTTTATCTTAGA
CGATCCTATCGTCTACACAAAATCACAATTGATTCAAATTGAGATATGGC
TGAGCATGATTTTTATTTAACATATATGTTGATAGCTTGTATGGAGGACA
ACAATACGAGTTGGTTGTGCCATCACTTCCAGGGAACTATATGGTGGCTT
ATTCACTTTCATTGTATGTCAGTATCTACCCTCTGGTAACGTTAATGGCT
TCTTCTTGTCCAATGTTATGCAGTTGAGGTTTGGAGGTAAGTAAGATCAA
CGGTTAGGAGGAACTTGATTCATAATTTTGTAGTTTGGCTAAGACATTCT
TATTTAAAGCTGAATATGTGAGAATTTCCATTGGACATAAAGAAAAAAAG
TTTTTGTTCAAAAAGTGTGTAGAGTGAAGACTTCTCAGCCTCCTCATTTT
TGAGCAAATCAGACTTCCTTACTTTTCCTGAACTGAAGCGAAAAATTTTT
ATTGAGAAAAAATGTGGTAATGTCGGCTTAGCTTTCATTGGCCGAAAGTA
TCAAAATAAGTAAACTACGTAAGTTTTTTAACAAATCAATCAAAAATCTT
ATTTTTTGACAAGTTGACAAACAATAAATGAAAACTCGGGTGAAACAAGG
CATGTCCCAAATATATTTTGCGTGACGCACACCGCTTCCCATTATCCATT
AATTTTCATATATAGCTCAAAAGAATCGTATCAACGAGAGGATTTCGAAA
AGTGCTGGGTCAAAAATTTACATCAAGCCAATCTCAAGATATCGGCCAAA
AACTGATTTTGACGTTATAAAATACATCGCAAAAACACGTCAAAAAGACA
ATTTAAATGACGTCATTATAGAAAAAAGGCGATAATTCCGATTAACTTAC
TACAATCAAAGCAAAATTTTGACTGGAGATGTAAATTAACGATTCTAAAA
TATTTCATGAAAAAAAATTTGAAAATTTATGATGACGTCAGCATTTTTTG
ACGTATTTAAATTTTTCCCGACAACAAATGACGTCATTGAAATTTTCTGA
AAATTTTTGAACAAATATTTCAGAATCATTAATTTACAACTCCAGTCAAA
ATTTGGTGTTGATTGCATTAATAAAATTGAAGTTATCGCTGTTTTTCAAT
AATGACGTCATTTGAATCTTACTTATGACGTGTTTTTTCGTTGTATTTTA
TAACGTCAAAATCGATTTTTGACCGATATCTTGAGATTGGCTTAATGCAA
ATTTTTGACCCAGCATTTTTCGAAATCCGCTCGTCGATATGATTCTTTTG
AGCTATATATGAGCGTTAAGGAATCATTGGAAGCGGTGCGCGTCATGCAA
AATATATTTGGGACATGCCTTGTTTCACCCGAGAATGAATGAAGGCAGAA
AAAATATCAAGAAACGCCTCTTTTCACTTTTAGCGACCATCCCAAGACAT
CCACGAGAACTAGAAGCACCAATAGGATGCATTGACCGTTTTGAGAATTG
TAACATGTGGACCGGCGTCTGTGGACAAACAACATTTCGAACAATGATGG
TACAATATTGCAAGAAAACCTGTCAAATATGCTAATATAAGAAGAATTTC
TGTACAAGCCTGTACCAGACCCAAACTTTTGAAATAATATTGTCATTGAG
GGATAGAAGTGAGACAAACAGATATTAATAGTGGTACGATGAAAGGAATA
GTTTTATATGAAGTTACATTAGAATTCGAAGGTTGTGAACATTGAGTTTA
AAACCCGAAGGGCTAGAGTAGAATCTCTTACCTTTCCCTTATCTGATATT
CCGATGGCGTATTGGCGGCCGCCCACGCTAAAGCTCTAAAGGAGCGGGCC
AATAT

Coding sequence (CDS) from alignment at sc0000130_pilon:586847..589551-

>MSTRG.15062.1.p1 ID=MSTRG.15062.1.p1|Name=MSTRG.15062.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2796bp|location=Sequence derived from alignment at sc0000130_pilon:586847..589551- (Clytia hemisphaerica_ch_hm2_pilon)
CGACCATCCCAAGACATCCACGAGAACTAGAAGCACCAATAGGATGCATT
GACCGTTTTGAGAATTGTAACATGTGGACCGGCGTCTGTGGACAAACAAC
ATTTCGAACAATGATGGTACAATATTGCAAGAAAACCTGTCAAATATGCT
AACTTGTATGGAGGACAACAATACGAGTTGGTTGTGCCATCACTTCCAGG
GAACTATATGGTGGCTTATTCACTTTCATTGTATGTCAGTATCTACCCTC
TGGTAACGTTAATGGCTTCTTCTTGTCCAATGTTATGCAGTTGAGGTTTG
GAGGTACATAGAAATCGAAGGGTACAATTTCAACGATCCAGCACCAGATT
TGGATATCCATGGACATTTTACAGCGATGAATTTTTTGCAGGAGTTATTG
TTTCTAATTATCGCTTATAAGCTATTTCCAGTCGTTCAAACGGTGATTGA
TGATGGTGTATCATTAGCTGATAAGACCACGTACGCACATAACAAGGTCC
GTTATTTACACGCTGTCCAGGATATGGTATGGGATCAAGAATTAGCAGAT
AATTCGAAAGCGTGGGCTGATTTATTAGCTTCAGAAAACAGTCTTCATCA
CTCTGAAGGCTCCAAAATGGGAATGTATGGGGAAAATCTTTACAAAGGTT
TCGATGGTTTCAAAAATGAGAAAACTGTCGCAGATGCCGTTTATAATTGC
GACCATCCCAAGACATCCACGAGAACTAGAAGCACCAATAGGATGCATTG
ACCGTTTTGAGAATTGTAACATGTGGACCGGCGTCTGTGGACAAACAACA
TTTCGAACAATGATGGTACAATATTGCAAGAAAACCTGTCAAATATGCTA
ACTTGTATGGAGGACAACAATACGAGTTGGTTGTGCCATCACTTCCAGGG
AACTATATGGTGGCTTATTCACTTTCATTGTATGTCAGTATCTACCCTCT
GGTAACGTTAATGGCTTCTTCTTGTCCAATGTTATGCAGTTGAGGTTTGG
AGGTACATAGAAATCGAAGGGTACAATTTCAACGATCCAGCACCAGATTT
GGATATCCATGGACATTTTACAGCGATGAATTTTTTGCAGGAGTTATTGT
TTCTAATTATCGCTTATAAGCTATTTCCAGTCGTTCAAACGGTGATTGAT
GATGGTGTATCATTAGCTGATAAGACCACGTACGCACATAACAAGGTCCG
TTATTTACACGCTGTCCAGGATATGGTATGGGATCAAGAATTAGCAGATA
ATTCGAAAGCGTGGGCTGATTTATTAGCTTCAGAAAACAGTCTTCATCAC
TCTGAAGGCTCCAAAATGGGAATGTATGGGGAAAATCTTTACAAAGGTTT
CGATGGTTTCAAAAATGAGAAAACTGTCGCAGATGCCGTTTATAATTGCG
ACCATCCCAAGACATCCACGAGAACTAGAAGCACCAATAGGATGCATTGA
CCGTTTTGAGAATTGTAACATGTGGACCGGCGTCTGTGGACAAACAACAT
TTCGAACAATGATGGTACAATATTGCAAGAAAACCTGTCAAATATGCTAA
CTTGTATGGAGGACAACAATACGAGTTGGTTGTGCCATCACTTCCAGGGA
ACTATATGGTGGCTTATTCACTTTCATTGTATGTCAGTATCTACCCTCTG
GTAACGTTAATGGCTTCTTCTTGTCCAATGTTATGCAGTTGAGGTTTGGA
GGTACATAGAAATCGAAGGGTACAATTTCAACGATCCAGCACCAGATTTG
GATATCCATGGACATTTTACAGCGATGAATTTTTTGCAGGAGTTATTGTT
TCTAATTATCGCTTATAAGCTATTTCCAGTCGTTCAAACGGTGATTGATG
ATGGTGTATCATTAGCTGATAAGACCACGTACGCACATAACAAGGTCCGT
TATTTACACGCTGTCCAGGATATGGTATGGGATCAAGAATTAGCAGATAA
TTCGAAAGCGTGGGCTGATTTATTAGCTTCAGAAAACAGTCTTCATCACT
CTGAAGGCTCCAAAATGGGAATGTATGGGGAAAATCTTTACAAAGGTTTC
GATGGTTTCAAAAATGAGAAAACTGTCGCAGATGCCGTTTATAATTGCGA
CCATCCCAAGACATCCACGAGAACTAGAAGCACCAATAGGATGCATTGAC
CGTTTTGAGAATTGTAACATGTGGACCGGCGTCTGTGGACAAACAACATT
TCGAACAATGATGGTACAATATTGCAAGAAAACCTGTCAAATATGCTAAC
TTGTATGGAGGACAACAATACGAGTTGGTTGTGCCATCACTTCCAGGGAA
CTATATGGTGGCTTATTCACTTTCATTGTATGTCAGTATCTACCCTCTGG
TAACGTTAATGGCTTCTTCTTGTCCAATGTTATGCAGTTGAGGTTTGGAG
GTACATAGAAATCGAAGGGTACAATTTCAACGATCCAGCACCAGATTTGG
ATATCCATGGACATTTTACAGCGATGAATTTTTTGCAGGAGTTATTGTTT
CTAATTATCGCTTATAAGCTATTTCCAGTCGTTCAAACGGTGATTGATGA
TGGTGTATCATTAGCTGATAAGACCACGTACGCACATAACAAGGTCCGTT
ATTTACACGCTGTCCAGGATATGGTATGGGATCAAGAATTAGCAGATAAT
TCGAAAGCGTGGGCTGATTTATTAGCTTCAGAAAACAGTCTTCATCACTC
TGAAGGCTCCAAAATGGGAATGTATGGGGAAAATCTTTACAAAGGTTTCG
ATGGTTTCAAAAATGAGAAAACTGTCGCAGATGCCGTTTATAATTG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.15062MSTRG.15062Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.15062.1.p1MSTRG.15062.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.15062.1.p1.exon4MSTRG.15062.1.p1.exon4Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.15062.1.p1.exon3MSTRG.15062.1.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.15062.1.p1.exon2MSTRG.15062.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.15062.1.p1.exon1MSTRG.15062.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000130_pilongenomesc0000130_pilon:586847..589551 -