MSTRG.15045.2.p1 (mRNA) -

Overview
NameMSTRG.15045.2.p1
Unique NameMSTRG.15045.2.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000130_pilon:356819..359425-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.15045.2.p1 ID=MSTRG.15045.2.p1|Name=MSTRG.15045.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2607bp|location=Sequence derived from alignment at sc0000130_pilon:356819..359425- (Clytia hemisphaerica_ch_hm2_pilon)
GTAAACTGAATAAAATTTTAACCTTTTTTTTTATAAGCACGGAAAATTTG TTTTACAGCTCCTCAATATAGTTAAATGTAAGCTCAATATAAACCTATTT ACTGACGTGCGGATCATTTTGTGTCCAACTGAACCTGATAAAAGAGAGAA TCTCAGTCTTTTTTGAGGAAAATGAACATAATATGTATATCTTTGAAAGA ATCGGGAGAGTGCTAAATTTGTTGATTTTTACGCCGCACTTGGTATCTAG CAAAGACCGAAGATTGATAAATGTATACTTGAACCCTTTCGCGTCGATGT TGGCAGCTTAACAATGATCACTAAGTTATTGGGTCGGTATAAAGTTGGGT ACTGGCTGCGCATCAGCTCGATACAATTCCTTTGTCGAAAATGTCAGGTA CCCCCCTTTGTTTACTGCAAACTAGGTTAGTAGTAACAATAGCTTCGTTG AGAATAAGCCTACTTGTTTTGTAACCTTCAAGCTTCAAGAGAATTGATAA GTACAAGTTCTGAATGAAGCATTACTTTAGGTGTACAAACTTTCGCAGAA ACACAAGGTCGAAAAATCGCGAAATTTAGCGACAGACTTTTAAATTGAAA CCCTCTTTTGTAAAATATTGACTATCGAAGCTTTAAAAATACTTATTTGT AAACTAATATTGGTCAACAAAAATAAGGGTGTAAAACCAGCACTTGTCAA AGGTTTTACACTTAATATGTGACAGTTTTTAAAGTGCTTTTAACAAATTA TCGTATCATATGTTTCTTGGTTTTGGTGAAAGATAATAAGAATCAAGAGA AATAATGTTAAAAATGATAAATCTAAAAATCTTAAACTAGTATTATATTT TCTGGTCAGGGAAATTAGAATTTAATCAGTCGTTTGTGATGTTCTTTGGC GGTTTATTACCATGTTAGATTATCAAATCTGATATGGAGCGAAAAATGTC ACGACGACCAAGGAGATCTTTTGTCACGATTGACGATACTTCGCTTTATG AAGCTTCGTATTTAGGGAATAGTCATTTACTTGAAAGGCTTGTGGCTTTG AGTTATATCAAAGCACAAATTAGTAAACCTGATGAAGAATGGGGATTTCG AACGGCTTTACATATCGCTGCTTCAAGAGGTATTAACCTTTTAAAGCTTA CGGCTATAATGATGAAAAATTCGTAGGTTGAAATGGCGCCAAAAGACAGA TTTCACCAAAAAGCACCCCTTTACTATCTTCCGCTGTTAGATTAGCATTT TTTACCTACCTACAAAGAAGAAACATAATCCTAAATTTTCCATAAAACAT TCTCCTAAAATTTGCCTCTCCACTTTACCGCTTTACCGCAGTCGACCCAC TATGTTACTGCTTCAGCTGCTTGTGACACAAAGACAAAACTTTCCAAACT TAGATATTTACATTTGTCAGCGAAGACGAGAATTTGAAAAAAGGAGAGGA GCATGTTCCAATAAAGAGAAAACTTAAGGCTGTCTCATATTCAGTTAACC AGACACAGTTTTAAATGCATACCTCTGCTCTCTGTTGAAGGTCATATCGA ATGTTGTGAGATCCTTCTTGAAAATGGTGCGGACCCAACATTACGTATGT ATGACGGATGGACACCAGCCCATTGCGCCGCCGAAATTGGTAACATTGAG GTTTTGAAACTCTTGATCAGATATTCAGGTACTGTGGTAGCGAAAGATGA TGCTGGTGCAACTCCAAGACACATAGCAAAAACCTATGGACATAAGGACT GTGCAACCTTTCTGAAAGCGTAAGTTGATTTTATACCACAATACAACAAA GCATGCTAACAGACTCAAATCAAAAGTTTAGTTTAGCTAATGTATCTTAT CATCGAAAGATTATCAGGGTATTTAAAAATTTCACGTATAATTTTCTAAA AAGACTATAAGTGAAACTAGCAAGGCAGCTGGCATCCACTAACGGATTCG TGCTCCTTATAGGTGTAATACTACCTGGGGTTTTGTAGAGGTCTGCGATT CAGACTAGGATGAAACAGAAGACTGAAAAGCCGAAATTTCTTACATAAGA ACAAATCATTTTTCCCGGGGGGGGGGGGGGTACTAGGGCAAGATGGGTTA CGGGGATGCTCCGCTGGTCAGGGTACCTTTTTTGACCTCCACGAGTCCCA GGTAGGGTCGCAAAAACACCAAAATAGAAAAATCAGTCCCCCGTAGGGTG CCTATTTTTGGAAAATTTGGGGAAAAAGTAGAAAATTTGAGAAAATTTTG GAATTTCAGTCCCATTCAGGGTCACTTTTTTCGCAAATTTCGAGTCCCAC GTAGGGTCCATTTTTCGAACGTCAGCGGAGCACCCCCGTCGGTCGACAAG GGTAGTACCCCCCCCGGGTCATTTTTTCTTTCAGAGTTGAGGAGCATCCA TCACAGAAGCAAGAAATTATTCGAGACCGAATACAAAATGCAGCACGAAG AACGTTACTCAAAATACAAAAGGAATAACACACTGTGTTTGGCTGAGAAG TTGTGTTAAAAAAATTTAACCATCGATACTTTAAAGAGATTTGTAAATAT ATTTATAACTTTTAATAATTAGTGGGAAAAATTATTAAAATTTTTAGTTC GTAAAAA

Coding sequence (CDS) from alignment at sc0000130_pilon:356819..359425-

>MSTRG.15045.2.p1 ID=MSTRG.15045.2.p1|Name=MSTRG.15045.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=990bp|location=Sequence derived from alignment at sc0000130_pilon:356819..359425- (Clytia hemisphaerica_ch_hm2_pilon)
AGTTGAGGAGCATCCATCACAGAAGCAAGAAATTATTCGAGACCGAATAC
AAAATGCAGCACGAAGAACGTTACTCAAAATACAAAAGGAATAAGTCATA
TCGAATGTTGTGAGATCCTTCTTGAAAATGGTGCGGACCCAACATTACGT
ATGTATGACGGATGGACACCAGCCCATTGCGCCGCCGAAATTGGTAACAT
TGAGGTTTTGAAACTCTTGATCAGATATTCAGGTACTGTGGTAGCGAAAG
ATGATGCTGGTGCAACTCCAAGACACATAGCAAAAACCTATGGACATAAG
GACTGTGCAACCTTTCTGAAAGCATGTCAGAGTTGAGGAGCATCCATCAC
AGAAGCAAGAAATTATTCGAGACCGAATACAAAATGCAGCACGAAGAACG
TTACTCAAAATACAAAAGGAATAAGTCATATCGAATGTTGTGAGATCCTT
CTTGAAAATGGTGCGGACCCAACATTACGTATGTATGACGGATGGACACC
AGCCCATTGCGCCGCCGAAATTGGTAACATTGAGGTTTTGAAACTCTTGA
TCAGATATTCAGGTACTGTGGTAGCGAAAGATGATGCTGGTGCAACTCCA
AGACACATAGCAAAAACCTATGGACATAAGGACTGTGCAACCTTTCTGAA
AGCATGTCAGAGTTGAGGAGCATCCATCACAGAAGCAAGAAATTATTCGA
GACCGAATACAAAATGCAGCACGAAGAACGTTACTCAAAATACAAAAGGA
ATAAGTCATATCGAATGTTGTGAGATCCTTCTTGAAAATGGTGCGGACCC
AACATTACGTATGTATGACGGATGGACACCAGCCCATTGCGCCGCCGAAA
TTGGTAACATTGAGGTTTTGAAACTCTTGATCAGATATTCAGGTACTGTG
GTAGCGAAAGATGATGCTGGTGCAACTCCAAGACACATAGCAAAAACCTA
TGGACATAAGGACTGTGCAACCTTTCTGAAAGCATGTCAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.15045MSTRG.15045Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.15045.2.p1MSTRG.15045.2.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.15045.2.p1.exon3MSTRG.15045.2.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.15045.2.p1.exon2MSTRG.15045.2.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.15045.2.p1.exon1MSTRG.15045.2.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000130_pilongenomesc0000130_pilon:356819..359425 -