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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000130_pilon:215906..218149- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.15040.1.p1 ID=MSTRG.15040.1.p1|Name=MSTRG.15040.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2244bp|location=Sequence derived from alignment at sc0000130_pilon:215906..218149- (Clytia hemisphaerica_ch_hm2_pilon)
AAAGTGTTATATTATTCCTTACAATACATTGTACATTTCTCATTTCTTTC
ACAATGTAATTTAATCTAATCTTATTTATCACGAAGGATGGTATCTTTTA
ACAAAAAAGAGTAGAAACTGGCTGATATCATTTGCTATTCACTCCAGTGC
AAGCTAGAAAGACGGGTCGACACGGTACACGAGAATATCAAAAAAGCATC
AAAATGAAAATCCACCTGAAACGTAGTATTTTAATCATCTTCTTTATCAA
CATTAATGTTTTGTTAGGGTGAGTATTTTTTTCATGGAAAGCTCACGCTG
CTAAAGCGAATTCAAACTAGAAATAAAATTTGCTGCTTTGTCGGGTCTTA
GCGACGTTATGTGTCTGCTACCTAACAGTTTTCTAAATAGAAGATTAAGG
GTTCACATATATAGCTTTGGATTAAGGCTTTTAGATATGTAAGAAAATAA
CAATGGGTTTGCCAAAAACATTTTGATAAGATAAACAGCACGTTGAAAAA
ATCATTATATCAATTTATATGAAGGCAAAGTACTACGACTACGACGACTG
CGGCTCCTACTACGACAACAACAGCGGTTCCCACTACGACCACTACAACG
GCTGCTCCTACTACGACCACAACAACTGCAGCTCCAACTACGACCACGAC
AACAGCGGCACCTACTACAACCACGACAACAGCGGTACCTACTACAACCA
CGACAACAGCGGCACCTACTACGACCACGACAACAGCGGCACCTACTACA
ACCACGACAACAGCGGTACCTACTACAACCACGACAACAGCGGCACCTAC
TACAACCACGACAACTACCGCTCCTACTACGACCACGACAACAGCGGCAC
CTACTACGACCACAACAACTACCGCTCCTACTACGACCACGACAACAGCG
GCACCTACTACGACCACGACAACTACCGCTCCTACTACGACCACGACAAC
AGCGGCACCTACTACGACCACGACAACGGCCGCTCCTACTACGACCACGA
CAACAGCGGCACCTACTACAACCACGACAACGACCGCTCCTACTACAACC
ACTACAACTGCCGCTCCTACTACGACCACGACTACAGCCCCTCCTACGAC
AACTGCGACGGGTCCAACGGTCAAACCAACAAAAAAACCATCACATAAAG
GAATCATAATCGCCTGTATTATTGGTGCAATTGTGCTTATTTTAATCATT
GCAGTGATCATTTACTGCTTAAAAAGGTAATATTACCATCTTTCTCAAAA
GAAGAACGCATTTTTATATGGTTTTTAGACGTCCATAATTTCGGTGTTTT
ATAATAGAAAAGAATCAATAACTTTTAATAACTTTTTCTGATGTGATGTT
TTTTCTTTCTTTGAATAGACGTCGATCAAGTGACAACGCGGACAAAATGA
AGTTGACAGAAAATGACGAAAACAAGAAACATTATGATGCAACTTACAGC
TCCAAAGCGGCTTATGAATAGACAACTGCAGTATTTAGGTAAGTTAAAGT
CCCTTGCAATGCAAAAGCTCTTTTGTCATAAACATAAAATATCTTCATGA
TATTTGAGGCAGTAATTCAAGGAGAAGGTTAGATAAGAACTTTTTTTTAC
GTAATATCTCAAATTAACCGCGACTCTGATTTCTTTCCATGTGATCTATA
TGAAATACGAAACAATTACGAAACAAAGTTAATCCTTGACAACATAATAC
GATTTGCAAGGCATTATTTGGTTCATTCTATATGTATTAATTTGTCGATT
GTCTATTCCGTAGGGATGAGCATCGGAGACCAAGCATGCATGCACTGAAT
GTATAAAACACAGAGTGTAAAAAGTTGAAGGAAACTCAGAGAGAAGCTCA
TCATTCGATGTCCAAACTTATGTATTCTATCTAAAATTGTTTTTCATGTC
TAAATTTACTTATTTTATTTAAAATAGCCATCTTTTTTAGGCAAAAACGA
ATGTATGATGCCGTAAGATACTTCAGTTAAAAAATATAATGATAAACATT
CCTCGGTTTCCAATTCTTTCTAGTTTGTGGTCAATGCAGTGATTTTGTGA
TAAAGCCTTTTATCTTTTCACTTGATGAACTCGTTTGTTTTGCAAACGTG
TTCAACCTGGCGTATTAAGCAATTTCAGAGAATGATTTTTTTTTTCATAT
CAGGATAACGTTTGATGTAGATAAATGACCAATTTGAAGTTTGACTCACT
CACTCAGTTTACTTTACCCTTTTCCATGGAACGTTGTTAAAAAA Coding sequence (CDS) from alignment at sc0000130_pilon:215906..218149- >MSTRG.15040.1.p1 ID=MSTRG.15040.1.p1|Name=MSTRG.15040.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2610bp|location=Sequence derived from alignment at sc0000130_pilon:215906..218149- (Clytia hemisphaerica_ch_hm2_pilon)
ACGTCGATCAAGTGACAACGCGGACAAAATGAAGTTGACAGAAAATGACG
AAAACAAGAAACATTATGATGCAACTTACAGCTCCAAAGCGGCTTATGAA
TAGGCAAAGTACTACGACTACGACGACTGCGGCTCCTACTACGACAACAA
CAGCGGTTCCCACTACGACCACTACAACGGCTGCTCCTACTACGACCACA
ACAACTGCAGCTCCAACTACGACCACGACAACAGCGGCACCTACTACAAC
CACGACAACAGCGGTACCTACTACAACCACGACAACAGCGGCACCTACTA
CGACCACGACAACAGCGGCACCTACTACAACCACGACAACAGCGGTACCT
ACTACAACCACGACAACAGCGGCACCTACTACAACCACGACAACTACCGC
TCCTACTACGACCACGACAACAGCGGCACCTACTACGACCACAACAACTA
CCGCTCCTACTACGACCACGACAACAGCGGCACCTACTACGACCACGACA
ACTACCGCTCCTACTACGACCACGACAACAGCGGCACCTACTACGACCAC
GACAACGGCCGCTCCTACTACGACCACGACAACAGCGGCACCTACTACAA
CCACGACAACGACCGCTCCTACTACAACCACTACAACTGCCGCTCCTACT
ACGACCACGACTACAGCCCCTCCTACGACAACTGCGACGGGTCCAACGGT
CAAACCAACAAAAAAACCATCACATAAAGGAATCATAATCGCCTGTATTA
TTGGTGCAATTGTGCTTATTTTAATCATTGCAGTGATCATTTACTGCTTA
AAAAGATGAAAATCCACCTGAAACGTAGTATTTTAATCATCTTCTTTATC
AACATTAATGTTTTGTTAGGACGTCGATCAAGTGACAACGCGGACAAAAT
GAAGTTGACAGAAAATGACGAAAACAAGAAACATTATGATGCAACTTACA
GCTCCAAAGCGGCTTATGAATAGGCAAAGTACTACGACTACGACGACTGC
GGCTCCTACTACGACAACAACAGCGGTTCCCACTACGACCACTACAACGG
CTGCTCCTACTACGACCACAACAACTGCAGCTCCAACTACGACCACGACA
ACAGCGGCACCTACTACAACCACGACAACAGCGGTACCTACTACAACCAC
GACAACAGCGGCACCTACTACGACCACGACAACAGCGGCACCTACTACAA
CCACGACAACAGCGGTACCTACTACAACCACGACAACAGCGGCACCTACT
ACAACCACGACAACTACCGCTCCTACTACGACCACGACAACAGCGGCACC
TACTACGACCACAACAACTACCGCTCCTACTACGACCACGACAACAGCGG
CACCTACTACGACCACGACAACTACCGCTCCTACTACGACCACGACAACA
GCGGCACCTACTACGACCACGACAACGGCCGCTCCTACTACGACCACGAC
AACAGCGGCACCTACTACAACCACGACAACGACCGCTCCTACTACAACCA
CTACAACTGCCGCTCCTACTACGACCACGACTACAGCCCCTCCTACGACA
ACTGCGACGGGTCCAACGGTCAAACCAACAAAAAAACCATCACATAAAGG
AATCATAATCGCCTGTATTATTGGTGCAATTGTGCTTATTTTAATCATTG
CAGTGATCATTTACTGCTTAAAAAGATGAAAATCCACCTGAAACGTAGTA
TTTTAATCATCTTCTTTATCAACATTAATGTTTTGTTAGGACGTCGATCA
AGTGACAACGCGGACAAAATGAAGTTGACAGAAAATGACGAAAACAAGAA
ACATTATGATGCAACTTACAGCTCCAAAGCGGCTTATGAATAGGCAAAGT
ACTACGACTACGACGACTGCGGCTCCTACTACGACAACAACAGCGGTTCC
CACTACGACCACTACAACGGCTGCTCCTACTACGACCACAACAACTGCAG
CTCCAACTACGACCACGACAACAGCGGCACCTACTACAACCACGACAACA
GCGGTACCTACTACAACCACGACAACAGCGGCACCTACTACGACCACGAC
AACAGCGGCACCTACTACAACCACGACAACAGCGGTACCTACTACAACCA
CGACAACAGCGGCACCTACTACAACCACGACAACTACCGCTCCTACTACG
ACCACGACAACAGCGGCACCTACTACGACCACAACAACTACCGCTCCTAC
TACGACCACGACAACAGCGGCACCTACTACGACCACGACAACTACCGCTC
CTACTACGACCACGACAACAGCGGCACCTACTACGACCACGACAACGGCC
GCTCCTACTACGACCACGACAACAGCGGCACCTACTACAACCACGACAAC
GACCGCTCCTACTACAACCACTACAACTGCCGCTCCTACTACGACCACGA
CTACAGCCCCTCCTACGACAACTGCGACGGGTCCAACGGTCAAACCAACA
AAAAAACCATCACATAAAGGAATCATAATCGCCTGTATTATTGGTGCAAT
TGTGCTTATTTTAATCATTGCAGTGATCATTTACTGCTTAAAAAGATGAA
AATCCACCTGAAACGTAGTATTTTAATCATCTTCTTTATCAACATTAATG
TTTTGTTAGG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000130_pilon | genome | sc0000130_pilon:215906..218149 - |
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