MSTRG.15034.1.p1 (mRNA) -

Overview
NameMSTRG.15034.1.p1
Unique NameMSTRG.15034.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000130_pilon:127897..129917-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.15034.1.p1 ID=MSTRG.15034.1.p1|Name=MSTRG.15034.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2021bp|location=Sequence derived from alignment at sc0000130_pilon:127897..129917- (Clytia hemisphaerica_ch_hm2_pilon)
CCGGACACACAAGAAGAAAGTGATACAAGCTACACTCCGGCGTTTTTGTA
GACATCTACAATTCAGTCTAGCTTTGACGCGGATGGTTCCCGCCCACGAA
AGTCTATGATGCGTCACAAAGGGAGGAACATGTATAAATAGTGCAGTTTG
AAACCGACTAAAGACATCATCCAGTCAATATCGAAGAAGGACTTCAATGC
AAATTAATTCAAGATGAACTTTTTCATGTTTTCATTAGCCTTTTTGGTAA
CTTTAAACGGTGAGATTTTCTTTCAAACTTTATAGCTTATAAGTTAATCG
AAGGTAGATTGCAGTTTCTTCAATAAGGGAGTACTGTGAGCTTTACATGC
ATTAAATAGTGTACAAAGCGTGATGTTTCGCCATAACAATTTTTAAAAAG
TCAAAACGTGTGACTATATGAGGTACGGTTATTATTTTACATAAGAATTA
GAGTGTACGTATTTAATTTGCACTTTCAAGAACGGTGGAGGGATTGGAAG
CGATAAATTTTTTTTTTTACTTTGAAAAAATGTGGTCGGGCTCAAGGCCC
GGGTGCTTCCCCCGGGTGCCGCGGTCCCTGCAACTTTAGGACTTATACAG
TTTATTCTTCTTTTTTAGTTATTGGAACAGCCCTAGGTGAATACCCACCA
GCGGTAGGACAAAAAGCAGGAGAAGATCCTTGCAAATATCATTATAAATA
TTGTAATGGAGTTGATCCTGGGCAATACGAAACTTACGACGCTCACGTTG
CTGTTCAATGTGGTGCTAATTACCAATTAGAATATTGTTATTATTGTCCT
TACGGTGAACAGATCAAGCTTATATCATCAACTGAAAACCCAATCTGTCT
ACCTGGCTATACCACATATACCGCACACATAGAAGAAGTCCACTATGAAT
ATTGTAAAAACAAATACTGCGAAGGTAAAAGTAAAGGCCGATATACAATT
GACAACAGCTATCTTGCACCATTCATTATTGAATGTGAAGGGAATTGCCG
AGCCAAACATTGTTATTTTTGTAAAGGGGAAGATGAAATTAGTGATCCTG
CTGTCAATCCTGAAAAACCACCGACATGTAATGCTCCTCAAACATTCGGC
GATTTCATTTAAATAAAGGTAGTTATATTTATATAACTGTTTAGGGCGAT
TTTCACTTTTATGTGACCTGAGATCAGATCGACATTGTTTTCTGCACACC
ACACTAAAAGTTTGAAGGGATGTGTGAAAAGAAGCGATCTGACAAATAAG
TTATCTCGAATTTGTTAAGACTGTGCTACACTAAAATGGGAATGCCAACA
AAGTAGGAATTGCGTTAAAAATTATAACAATATGTTATCAAGTTCATTTT
TATAAGAACAAACAATATAAGAACATAAGGCTTAGGTAGCCAAAATATCA
TGAACATACCCAATTTCTTAGAAAGTTGCATAAAAATACTCACAAAATAG
TGATAATATTTTCAGGCTTTAAACTCAAAAAGTTCAGTCCGAAATCTTCA
AAAATGCTACATATACCCTCCTATATATATCCCTATATGCCCATCATCCC
ATCAAGGATATCGAATAATTACGAATTTTTGTATTTCCCTCATAGGTGTG
GTAAATACGTAATTTGAGGTGATGATGGCACAACAGTATTATCAATTTTT
TTTTACAAAGGAATCTTTTTTAATTTAAACCTTTATTACTCGAAGGTCTC
CTTTTTCTTAACTCGAACAAATTTTGTTGTCCCCTTAATGACGATACGTT
ATAAACGCTATATTACTCCATAGCTCGAAATTTCGTTAACTAGAACAGGT
TTGTATTCTTCGTGCGTGTTCGAGTTATAGAGATTCCACTTTATAAACTT
TATTTATTTGTACTAACTATTAATGAAAGAAAAGTTCTTACTTACAGCCC
GTTGTCATGTTCTGGGTCGGTCCCCTTCTATCTACTGGAGATATTGCCTG
TAAAATTGTTACAAATGATATTTTTTTCATAATCTACAATGAAACATGTA
AAGATTTGTATTATTTGGCTA

Coding sequence (CDS) from alignment at sc0000130_pilon:127897..129917-

>MSTRG.15034.1.p1 ID=MSTRG.15034.1.p1|Name=MSTRG.15034.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1107bp|location=Sequence derived from alignment at sc0000130_pilon:127897..129917- (Clytia hemisphaerica_ch_hm2_pilon)
GTGTGGTAAATACGTAATTATTGGAACAGCCCTAGGTGAATACCCACCAG
CGGTAGGACAAAAAGCAGGAGAAGATCCTTGCAAATATCATTATAAATAT
TGTAATGGAGTTGATCCTGGGCAATACGAAACTTACGACGCTCACGTTGC
TGTTCAATGTGGTGCTAATTACCAATTAGAATATTGTTATTATTGTCCTT
ACGGTGAACAGATCAAGCTTATATCATCAACTGAAAACCCAATCTGTCTA
CCTGGCTATACCACATATACCGCACACATAGAAGAAGTCCACTATGAATA
TTGTAAAAACAAATACTGCGAAGATGAACTTTTTCATGTTTTCATTAGCC
TTTTTGGTAACTTTAAACGGTGTGGTAAATACGTAATTATTGGAACAGCC
CTAGGTGAATACCCACCAGCGGTAGGACAAAAAGCAGGAGAAGATCCTTG
CAAATATCATTATAAATATTGTAATGGAGTTGATCCTGGGCAATACGAAA
CTTACGACGCTCACGTTGCTGTTCAATGTGGTGCTAATTACCAATTAGAA
TATTGTTATTATTGTCCTTACGGTGAACAGATCAAGCTTATATCATCAAC
TGAAAACCCAATCTGTCTACCTGGCTATACCACATATACCGCACACATAG
AAGAAGTCCACTATGAATATTGTAAAAACAAATACTGCGAAGATGAACTT
TTTCATGTTTTCATTAGCCTTTTTGGTAACTTTAAACGGTGTGGTAAATA
CGTAATTATTGGAACAGCCCTAGGTGAATACCCACCAGCGGTAGGACAAA
AAGCAGGAGAAGATCCTTGCAAATATCATTATAAATATTGTAATGGAGTT
GATCCTGGGCAATACGAAACTTACGACGCTCACGTTGCTGTTCAATGTGG
TGCTAATTACCAATTAGAATATTGTTATTATTGTCCTTACGGTGAACAGA
TCAAGCTTATATCATCAACTGAAAACCCAATCTGTCTACCTGGCTATACC
ACATATACCGCACACATAGAAGAAGTCCACTATGAATATTGTAAAAACAA
ATACTGCGAAGATGAACTTTTTCATGTTTTCATTAGCCTTTTTGGTAACT
TTAAACG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.15034MSTRG.15034Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.15034.1.p1MSTRG.15034.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.15034.1.p1.exon3MSTRG.15034.1.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.15034.1.p1.exon2MSTRG.15034.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.15034.1.p1.exon1MSTRG.15034.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000130_pilongenomesc0000130_pilon:127897..129917 -