MSTRG.15029.8.p1 (mRNA) -

Overview
NameMSTRG.15029.8.p1
Unique NameMSTRG.15029.8.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000130_pilon:89147..91246+

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.15029.8.p1 ID=MSTRG.15029.8.p1|Name=MSTRG.15029.8.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2100bp|location=Sequence derived from alignment at sc0000130_pilon:89147..91246+ (Clytia hemisphaerica_ch_hm2_pilon)
ACACCCTCTCTTTACTCCCTCTTAAAACACTCACAAAAGGTTTGTATTGA AAATAATAGAATAGGTTGATGCTTCATGATATCTTTGGTCTACCATCTTG GGCTAACCACTGTGACCTATTTGTGGGTGAAAGATTGTTTCTATAAAGGA CTCTTCCTATCTTTAAACTTGGCTCTTTATTTATACACCTACTATAAGGA CATTCGATTTTTACTACATTTACTTCACTACAAGCTTTCTTTACCCGCAA ATTAAAAGAAGATGGTACtgcaaaaaataaacaaaataattgtACGGCAG CCGAGAGTATCTGAAGCGGCCTATGATGGGCACGATCGGGATATTTCGGG AGTTTGATTGTTACCATGGAGAAAACAAGCTCATTTTAATCCCTCAAGAT CTGTCGTTAGcgacttttaaatttttagataaGGGATATGCTTGTCTGGG AATCACAAAAATCTACATTGAGAATTGGTTCGGCCAAGACCGTCCCAAGG GAAGGGTGCACTAATGTTGGGGAATGTCGTCGAGTATGTGCGGACCTCAG AAAACCGACAAGATTTCCTATAAATctgaaagtgttttttttaacttcat GGTTTGGATACTCTTTAGTCCAAAACTCTTACCGTTTGCATTTACCCAGT ACCTATTTTTTGCTAATTACCACCCCACCCTAATCCCCGGGACCCTGACA CTGTCTCTGTCTCCATTTATGATATTTATTAGaacaatgttgtttttttt tgtctttagaTGAAATTGGAATCGATTCCATTATTTTTGCAAGTGGTTGA AAATCTTTCGCTTCACTGCCCGAAAACATTTTCACAAGTATTTTTTGATT ACTTCATTTGTTTTATCGCATGACAGCCACACacttatttaaaggtttta tttttacataagtgttcccgtttcatatcaaacacatatttcatatcagg acagtgtctgttaTATTATGCTGTTATAAACAACGtaattcttatttaaa aacaaaacctttaattcgtAGAAAAACACTTTACAACCTTTGAAAAGATC GTCAGTACACATTATAGTTTTAACGAGGGACTCTTCTTTAGACAGCTGAA ATTGTAAGGCTtggtgtttgtaaaaaatcgaaaaatcaacAAACGCGGGC CGTTTATGAGGCACTTTAGATTAGCAAGTTAGAGTGCAAACTTTTTGCTC AAGACTGTTCTCAAATTGTTTATCTCCTTTGCAGCTTTATCCGATGTGGA AACCACTCCTTGAAATCTACAGTAATGAGGTAAGatgattttatttgaaa ttaaagCGGCCACTatgatgagatggagttttgcGGAGACTTTTAACAtt aaaatccgccaaatttaatccccgcgaaaatttatcccatcaAAGTAATC TCAGATCAAAGCTTCTCTTTCTTGCATTTTCAATATCAGGTTTCAATAGC TAATATAAGTAAAGCGGAAGGGTCTCGGGTGATTTTACGGGTGTTTTTAT ATTACGACAAATGTTCTCTTCCTTGTAGGTGCCATCGTCAGCTCGGCAGC GCATAAAGGAGTTTGACAACCTACCGTCCGAAAGGAGCAATGTTCCACGT GGCGATTCATTATCTTACTGGGTGTCCGATATCCGTAAAAAGTTATGGAA TGCTGAACGTCTTACTAAAGGGAAACTGGCCCAAGTCGTCAATGTTTGAT CCTTCAGTTGATTATACagtgacctttatatatccctggaccaagttact caatcctgtccaaccaaaaatctttgatcggagctttttttttaaattgg taccctaaagaaggcactactcaatagcggggTGAATGCATCGAGAGAGC TAGATCAACTTTTCCTCGAATAGTTTTGATGATGTAGAGctgttagacgt taattttaaCATTGCAATAGCTTCTCCTCGgactcgggtaccaattccaa aaaaactcagatcaaagatagcggatatagcttggtccagggatgtATAA AGATCAGTGGAATTATACAGTTTACAAAGTTCTttcgattttatagcgat tttaccgaACGAAGAGGAAAATTACGGggttttgtgaaaatctggtacgt

Coding sequence (CDS) from alignment at sc0000130_pilon:89147..91246+

>MSTRG.15029.8.p1 ID=MSTRG.15029.8.p1|Name=MSTRG.15029.8.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1332bp|location=Sequence derived from alignment at sc0000130_pilon:89147..91246+ (Clytia hemisphaerica_ch_hm2_pilon)
ACACCCTCTCTTTACTCCCTCTTAAAACACTCACAAAAGaTGAAATTGGA
ATCGATTCCATTATTTTTGCAAGTGGTTGAAAATCTTTCGCTTCACTGCC
CGAAAACATTTTCACAACTTTATCCGATGTGGAAACCACTCCTTGAAATC
TACAGTAATGAGGTGCCATCGTCAGCTCGGCAGCGCATAAAGGAGTTTGA
CAACCTACCGTCCGAAAGGAGCAATGTTCCACGTGGCGATTCATTATCTT
ACTGGGTGTCCGATATCCGTAAAAAGTTATGGAATGCTGAACGTCTTACT
AAAGGGAAACTGGCCCAAGTCGTCAATGTTTGAACACCCTCTCTTTACTC
CCTCTTAAAACACTCACAAAAGaTGAAATTGGAATCGATTCCATTATTTT
TGCAAGTGGTTGAAAATCTTTCGCTTCACTGCCCGAAAACATTTTCACAA
CTTTATCCGATGTGGAAACCACTCCTTGAAATCTACAGTAATGAGGTGCC
ATCGTCAGCTCGGCAGCGCATAAAGGAGTTTGACAACCTACCGTCCGAAA
GGAGCAATGTTCCACGTGGCGATTCATTATCTTACTGGGTGTCCGATATC
CGTAAAAAGTTATGGAATGCTGAACGTCTTACTAAAGGGAAACTGGCCCA
AGTCGTCAATGTTTGAACACCCTCTCTTTACTCCCTCTTAAAACACTCAC
AAAAGaTGAAATTGGAATCGATTCCATTATTTTTGCAAGTGGTTGAAAAT
CTTTCGCTTCACTGCCCGAAAACATTTTCACAACTTTATCCGATGTGGAA
ACCACTCCTTGAAATCTACAGTAATGAGGTGCCATCGTCAGCTCGGCAGC
GCATAAAGGAGTTTGACAACCTACCGTCCGAAAGGAGCAATGTTCCACGT
GGCGATTCATTATCTTACTGGGTGTCCGATATCCGTAAAAAGTTATGGAA
TGCTGAACGTCTTACTAAAGGGAAACTGGCCCAAGTCGTCAATGTTTGAA
CACCCTCTCTTTACTCCCTCTTAAAACACTCACAAAAGaTGAAATTGGAA
TCGATTCCATTATTTTTGCAAGTGGTTGAAAATCTTTCGCTTCACTGCCC
GAAAACATTTTCACAACTTTATCCGATGTGGAAACCACTCCTTGAAATCT
ACAGTAATGAGGTGCCATCGTCAGCTCGGCAGCGCATAAAGGAGTTTGAC
AACCTACCGTCCGAAAGGAGCAATGTTCCACGTGGCGATTCATTATCTTA
CTGGGTGTCCGATATCCGTAAAAAGTTATGGAATGCTGAACGTCTTACTA
AAGGGAAACTGGCCCAAGTCGTCAATGTTTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.15029MSTRG.15029Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.15029.8.p1MSTRG.15029.8.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.15029.8.p1.exon1MSTRG.15029.8.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.15029.8.p1.exon2MSTRG.15029.8.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.15029.8.p1.exon3MSTRG.15029.8.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.15029.8.p1.exon4MSTRG.15029.8.p1.exon4Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000130_pilongenomesc0000130_pilon:89147..91246 +