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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000129_pilon:800687..805250+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.15015.1.p1 ID=MSTRG.15015.1.p1|Name=MSTRG.15015.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4564bp|location=Sequence derived from alignment at sc0000129_pilon:800687..805250+ (Clytia hemisphaerica_ch_hm2_pilon)
cGGCGTTGATGCTTCCATTGCTTACTTGATTAATGTAATGAGAGTGCGAA
GAAAATGAAACCCAAAGCGTAAAGAAAACCACGAGATGTGAACCAAGTAT
TCCAGAGCTTAGAACAAATTCGAATGAAGCTCATTCTCTCCTTActcaaa
taacaataataataacatgTTAATATAAACATTGCTATATATATCAAACC
TTTCACATGGTGTTATTGTAAAAAtgtactcactttctgtagtgtcactc
actttctgtagtgtcactcactttctgtagtgtcactcactttcggcATT
GCTGGAGGTGTTAAAAATGTGCCAGCTCTCTCCATATCTTACTACTATTG
GTGGATAGACTTTTTTAAAGATATGATTGATGATGGATTGTATGATCCTA
GTTTGAATTATCATTTGCAGTGTGCAAGGTTTTGTTTTACTGGAGTTATA
CAGCAAGAGTTAGATGAATTTCGAAAGATTTGGAACACTCATAGAATTCG
ACATGTGAATAATTCAGAGTGCCCGGCGGGAAAACCAGATCTTTTATACG
ACTTATCCGCGCGATATGGTGGAAGAGACTGTAGGTTTGATATTTTAGGT
CAAGATTTAGATGCATTGACGGATGACATGATCAAACAACCTTTAATGTT
CGGCTGCTCACAGGAATGTGTACAGTTTGCAAGAATCATTATGGGAGAAC
ATGGTTTAACTTATCCCCAAACAGTTGCACAAGCCAAAAATCTTTTCGAA
ATCCTAGTTGGTacatttgaccattttgtgcAATAAGTTCTCTAAATTTG
TTGTTCTAGTATATACTATATATTACCGTGATATTATTCAAATACATGAA
ACTTTTCaagcttttctttttttcatcttttcaaaAGTGGCAAAGTTCTT
ATGAGAAAAATCGCTCATCTTGACCATTTAATTTGCTGCTAATGATAAGC
AAGTATGCTTTGTACTAATAATCTAATAGGAAAATATCGAAAACTGATTA
GCTCATTTCCCATCCTCTTTTCACAAACCCTGGTCTAATGTTACTAATGT
AACGTTTCTtccttttaaccctttaagtgccgagcCCTTTTTTCTtctaa
gtttttaaaaaaaattaacaagttcAAAGCAGTTCAAAGTCAAACTTTAA
ACGGCCTATGGGACCACTAGTCTAATAAATACTGCAGGAAcaaattttga
ggtttttgGTTCACTTGTTAACCAAATATGGTGTCAATAAAaggtcaaaa
tttcagaaaataacTAGAACAAAATAGTTAGAATTGCAAAGTTTTAGTAT
AAGTCTACTGTGTATATAACATATGTCAATTTTAGCTTTCAGTTTTCTTG
TCTTGAAGGATGCTACAGTTCGAAAAtatttcgaatgtttatgtcACGTG
ATACGCAATCTGTAACGCaaaaaaaaTCGACCcacgtgaaaaaaaatttg
gacccACGCACAAAAAgctttgacccacgcacccacacTGGTTTACAACC
CACGCACCCatgcaatttagcagactcgtatTTATCCAAGGAGCAAGTAT
CCAGGAGGCAAAATGAGAATCTTTGCTTTTAGCGCCCGCTAATTAGTCTA
TTTTGCGCCCCTTCCATTAAAAACTACGATGTCGTTATGTtgcttatttt
ttgttttgatataagACAATGAATGCgagcgaaatttaaaaaaaaattct
ttactgTTGAGATcactttaaccctatttttatcaggggggtgttttcca
ccaggctggcactcttttgctaatagctcactgaaaattttttttaacac
tctgaaagtttttgacttttaatataattctattagcagcatgtatacca
aattttacaattatacaccgaccagatcaggttttatgacttttttgtgc
aggcataaatcataaaatccagctaaaaccctgtaaaatcccataatctt
aaatttagcataatttttgatctaggcatccaactgacttcaaattttga
caggttttaggtatcaataataaattttaaaaaatcatttaaaatttttc
aaaaactgctgacgtcatcaacaatgatgtcattgttttttgaaaaaatt
tactcattttctgcatggattttaaacctcaattttattagtatgttaaa
aaccggcaaatatgataaagatattctttttggcttttagaaattcaaaa
cagaatggaaaaatctccattcgttcaactttaattgctattttattgaa
tagtactttttcattggtcagcgataattgtgaaactttgtgatgacgtc
atcacctttatgatgacgtcatcaaccaaaattttttcctatgaactcct
tttatggtagagaacatttctgccaaatttcaagtccatatcttttctag
atcaaaagttatgcaaggctggtggaaaacacccccccttgagaatacaa
aatccgaaaaagcctgataataatagggttaaagctTTAAGATGAAATAT
TTCAGTGCGAGTGCAACCAGCGAACACTCAACGACCCTAAGGAAggtttt
ttacgtttttttaaaACGGCAtgaactttttccatataaacaTCGCTGTT
TTTGGGCCTAAACGAAGCGTATCTATGTATGAGTGAAGGTTCTGCCCAGG
CAGatggtacaaaatgcataaaactcgaaaaatgatgacgtcagcaaaaa
attgcaaaaaaagctttttcgactaaaaaatgctgacatctgcaaaaaat
tgaatgttttcaaGTTTAATAGATTGAAGTATTTAGATACCGTATGTGGT
CGGAATTTGAGACCTCTAACATGTTTATACATAAAGTTATATTCTgtcta
tgacgtcatcaaaatggctgattttttaattttttgagttttatgcattt
tCTACCATCTGCCTGGCCAGAGCCTTCACTGATACATAGATACGCTCCGT
TTAAGCCCAAAAACAGCGAtgtttatatggaaaaagttcatgctgtttta
aaaaaacgtaaaaaaccTTCCTTACGGTCGTTGAGCAGGAAaattcaaag
caatttttagCCGGATTAAAGAATTCGATTCTGAAAGCGATATACCGGAG
TTGTAACCCTAGCTAAACTGCTTCAAGGTCAAGTCATCAGTAAGGAACTC
AATATGAATCAATACATTGAAAAGCTTGGCAAAACTTTGGAGATTAAAGA
GTTTGATTCTCAAAGTAAGCTGAAGTATTCTTACTCCATCTATCTTCTTG
GCGAGTTGAATATACTTTATGATTTTGTGGAGATTGAACGATCAATGCAC
ATTGTGTTGAGGCGAAATAATGGTGTTGTAACTCTGGTCAAACTGGTTGA
AGGTCAAGTCATCAGTAAGGAACTCAATGTGGAGCAATACTAAAAAGCTT
GTCGAAACTCTGATAATTAAAGAATTCGATTCTGAAAACGATGTACTGGA
GTTGTAACTCTGGCTAAACTGCTTCAAGGTCAAGTCATCAGTATCAAGGA
ACTCAATATGAATCAATACATTGAAAAGCTTGGCAAAACTTTGGAGATTA
AAGAGTTTGATTCTCAAAGTAAGCTGAAGTATTCTTACTCCATCTATCTT
CTTGGCGAGTTGAATATACTTTATGATTTTGTGGAGATTGAACGATCAAT
GCACATTGTGTTGAGGCGAAATAATGGTGTTGTAACTCTGGTCAAACTGG
TTGAAGGTCAAGTCATCAGTAAGGAACTCAATGTGGAGCAATACTAAAAA
GCTTGGCTATAACCGGATTCCTTTACCCTATGAATAGATTCGATCATCTT
TTATTACCAATTTTCCAGAAGATGAACAAAATTCTTCTCAACATGGTTTT
AGAAAGGGGAGATCTTGTTTTAGCCAACTTCTTACACATTTTGATAGTGT
CTTGAAAGAACTGGAGGATGGCAAGGATGTTGACGTGATTTACATTGACT
TCAGTAAAGCTTTCGATAAAGTAGACCATGTCATTTTATTGAATAAACTG
AAAGCTGATGGGGAAAGTGAAAAAACTTCTGACATGGATAAAGTCTTTCT
TAACCAAACGCAACAAGTAGTTGACGGTGAAACCTCTAAAGCAGCTGAGA
CAATTTCTGGTGTCCCTCAAGGCTCAGTTTTGGGCCCTTTATTGTTTATT
ATCATGATCGGTGACATCGATGAAAATGTGGAGTATTCAACACTCAAGCT
TTGCAGATGACACAAGAAGGAAAAAGGCTATCCAGAACCTGCTAGACACC
TTCAAACTTCAAGAAGACTGAGTTTACAAATGGGCATTAGATAACAACAT
AATGTTAATGATAAGAAATTTATTTGAACACACTCATTATGGCAAACAGA
TGGCATTGGCTATAGCTATATTACTGATCACTCGAAAATTATCGACGAGG
AATCTGCAGTGAAAGACCTTGGTGTAGTGTAGAGGATACAACTTCAAGCA
GCATATTAATggtataataaaaaaatcaacagaACTTGTCGGCTGGGTTT
TAATAACTTTTAAATCCAGAAGTAAAGAAGTGATGACAACACCATGGAAG
TCGTTAATCATCcc Coding sequence (CDS) from alignment at sc0000129_pilon:800687..805250+ >MSTRG.15015.1.p1 ID=MSTRG.15015.1.p1|Name=MSTRG.15015.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=414bp|location=Sequence derived from alignment at sc0000129_pilon:800687..805250+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGATTGATGATGGATTGTATGATCCTAGTTTGAATTATCATTTGCAGTG
TGCAAGGTTTTGTTTTACTGGAGTTATACAGCAAGAGTTAGATGAATTTC
GAAAGATTTGGAACACTCATAGAATTCGACATGTGAATAATTCAGAGTGC
CCGGCGGGAAAACCAGATCTTTTATACGACTTATCCGCGCGATATGGTGG
AAGAGACTGTAGGTTTGATATTTTAGGTCAAGATTTAGATGCATTGACGG
ATGACATGATCAAACAACCTTTAATGTTCGGCTGCTCACAGGAATGTGTA
CAGTTTGCAAGAATCATTATGGGAGAACATGGTTTAACTTATCCCCAAAC
AGTTGCACAAGCCAAAAATCTTTTCGAAATCCTAGTTGGTacatttgacc
attttgtgcAATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000129_pilon | genome | sc0000129_pilon:800687..805250 + |
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