MSTRG.15008.7.p1 (mRNA) -

Overview
NameMSTRG.15008.7.p1
Unique NameMSTRG.15008.7.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000129_pilon:699506..701264+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.15008.7.p1 ID=MSTRG.15008.7.p1|Name=MSTRG.15008.7.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1759bp|location=Sequence derived from alignment at sc0000129_pilon:699506..701264+ (Clytia hemisphaerica_ch_hm2_pilon)
GGAGTCGACGTCGACGATTAAACAATGTGTGATGCTACGGCGGTAAACTT
AAAGTTGTTGGAAACTTGGTGTCACCATAGCAACTGAAAACAATCAGATA
ATTTGTAAACGaatgaaatcaattttaagcaaAGCGAAAGTTGGACCACG
ATTGGTTATTCAAGATTCAACTATCAAGAAAGGAATTTTAAATCATTCCC
CTATGGAAAATAGAGCTTAATTTCGAAAAGAGTCATCTACTTGACATTGG
GTAAACAGCCCCTTGTCTGGGGCACCCAAGGGTCACCCTTTAGTGAAGTT
GTGCTTCGAAACATACAATTCTCAACTTTGATCTTTCAGACTTTTTTACC
GTTGTTCTTAATCCAGAGCGCTGGATTTTATTTTTCCGGTTGTTGGTTGG
TTGTACTGGATATAGTGTTATCACTGGTTCTTAGTAGTATGAAAACTTGT
TCTATCGAATGAAGTATTTTGTTCATTTGATCCAATGGGAATTTTGGGCA
AGAAAAGGAGTTATGAAGTTTACGAATTTTGCAAAGAATCCATATTTTGT
ACGGGGTCCAGCTTCTGCACTTCACCAAGTGATACAGACAACTTATTGTT
AACTTATTTTATATTGGCCGAAACGGCAGCCAGCTCTAACATCCCGACGA
ACGACATTGGCGGACACTCGCCCGCACCGTCCCTTCCTGCTTCACAATCT
GTTTTTGATTGTACACCGAACTGTGCGCTGATTTGGATAATTCTGGcgtt
taaagcttttttttgtTTCCATTGCCATTATTCTCTTAAGTCACAACTTA
CGGTCTCCCAAATCCTTTGGTGAGAATGGTGAATGAAATGTTTTGCTCCT
ATCTCCAGTGGCAAACATTTCGAAAACTATCCTGCATCATTGCACTGGTC
TACTAAAATTCATATTCTCATCCAAATTCGTCTTTTTGAATTCATCAAAG
TTGCTATATGGTGAGTTGGGTCAGCTTCAACCATCATATAACTTGAAAGG
AAATATTTCTAACAAAATCAAATGTTGACTTCAATCTTATTTCAGTATAA
TTGTCTTATATTGGTTTTCGGCTTCCAAAGGGCACTTTCTGATTTCacgt
tttgttttgatagaCAGCCTTTTTTGCGAATacttactttaatgggataa
atttcgcagattttgcggatttgggtgtcatccgcgaaatcccaatgaaa
aatttggaaaggtcttatccgcgaaatttttttgaacaCTACTCAAATAA
TGACAGATGATTTCTTTTAAATGTTAACTTGCATAAAaaagcgctaataa
tgtgtattttgaCAACTagcaaaatcatgaaaatattgaCTCCTAATaat
gccatccgcgaaattaagccccgcgaaaattaatcccattaataTAGCTG
GATGTAGCCCCACgaacgaaaattaaaaaaaagtgacgATTTAAAGGTGT
CACAAACAGCACGAAAAGTCCAAAAGTTTGTCgattctcataaaaaagac
aTTTTCTACAAAATTGAGTCTGGTCACACTCTTCTGATTTCCCTTCTtat
atatgatttttttttacttttaagtgTTATAAACTCGTCGTTAAAGCAGC
AAAAAGTAGTTAAAAAGTTGCTTAAAGGTGAAGTACGCACTCCAGATTGA
TCCAGAAGTTCCGAAAATTGTGAAGAAACGTCCAAAAATGAACAATTATT
TAAACTGACGTTAtttttggccttcttcttaccttttcttttcttttcat
tcacGAAAG

Coding sequence (CDS) from alignment at sc0000129_pilon:699506..701264+

>MSTRG.15008.7.p1 ID=MSTRG.15008.7.p1|Name=MSTRG.15008.7.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=339bp|location=Sequence derived from alignment at sc0000129_pilon:699506..701264+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGAATTTTGGGCAAGAAAAGGAGTTATGAAGTTTACGAATTTTGCAA
AGAATCCATATTTTGTACGGGGTCCAGCTTCTGCACTTCACCAAGTGATA
CAGACAACTTATTGTTAACTTATTTTATATTGGCCGAAACGGCAGCCAGC
TCTAACATCCCGACGAACGACATTGGCGGACACTCGCCCGCACCGTCCCT
TCCTGCTTCACAATCTGTTTTTGATTGTACACCGAACTGTGCGCTGATTT
GGATAATTCTGGcgtttaaagcttttttttgtTTCCATTGCCATTATTCT
CTTAAGTCACAACTTACGGTCTCCCAAATCCTTTGGTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.15008MSTRG.15008Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.15008.7.p1MSTRG.15008.7.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.15008.7.p1.exon1MSTRG.15008.7.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.15008.7.p1.exon2MSTRG.15008.7.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000129_pilongenomesc0000129_pilon:699506..701264 +