MSTRG.15005.1.p1 (mRNA) -

Overview
NameMSTRG.15005.1.p1
Unique NameMSTRG.15005.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000129_pilon:639734..641273+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.15005.1.p1 ID=MSTRG.15005.1.p1|Name=MSTRG.15005.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1540bp|location=Sequence derived from alignment at sc0000129_pilon:639734..641273+ (Clytia hemisphaerica_ch_hm2_pilon)
ttaaaaataaaatgtttggttGCAGGAATTGATTAATTTACAGAGGTAat
gaaaaccaattttttttttgattacatatttttttaatctattataaaaa
caattttataagaaaatgaggGTCGAAAAGTGGCCGAAACCTTAGAACAA
ATTGAGAACAATCACATCCCTATACAGTTTAGAAATGGTTGAAAAAAGTC
AGTAAGTGAATATAGTAAGCATATtgagaacatcttaagaacatctAAGC
CTGAAATTCACGAAGGAATAAGAAAAGCCGAGACTAGGTCAAAATttaat
ggttcttataaaaaattgtttaatatATCATCAGGAATATCCGTCAGTAT
AATTAGCCAGAcgaataataaaaacaaacgtCAAGATTAAGATATTGATC
ATCCTGATCTGGCGTCACTTTGTACAATGCAAAAAATCTCGCAGTGACCA
AccaaattgataaaatatttgattttccagATTGTTTATTCAAGAGAAAT
CCCAATTTTTCTAGATCGGAAATTAAAATTGACACGGATAATTTCTCTTC
GCTGAATTTCTTTCCTTAAAATATATGAGATCCCTTCCAGTGGTTTATGT
GATGGTGTGATTGGACCtttttttGGCGCGATGACTTGTTCTGTATTTTC
GAAAAACGTGATTgataaaaggatttttttttgtggtttgatggCACGAT
GAGAGAATTAATTATTTAGACGGCGTAATCAGAGACTCCACTGGGGGGAG
GGTGTGGCTCTACAATCTgaatagactagtaaactagtctgctaattgat
catttaagagggcgggaacataagaGGCTGTTGATTAACAGGTTTCAGCT
CCTTCCGccgacaaattttcttcctaCGCTTGCCTCACTCCTactctaga
ctggagtcgttcatAATGCGCGTAATACAgaagtataggcgttatatgat
aatacgattattgttacgggatttagtttgtataactaaaattgttccct
ccattactttatgctttatttctactatgtctgaattagttcgtctagct
tgctagactactcCTACTCCTACTCTTCCCGCATGACATCGTTCCAGCct
gactggcgtgccagtctataaTCATAAAGAACAAGCTACAGAACAGAATG
AAAATTGACATCTAAactaaaagatgaaatttcttCCTTTCAGTATTACA
TCATCATCATGTTTATCGTTCGATTATTCGTCTTCAATCTTCTTTACAAT
GAAGTACTCAGTCAAGCTTTAAGTCGATACCTCCGTAAACAACAAGCAAC
ATTCAGCCAAAACGCACTCACTGGACAATGTTTAAAGAAATCACTTCATG
AAGCGCTGACGTCAGTCAACAATATTGCGTACGATTCTTTATGTGCACAA
CACTGTCTAGCGCATGCGCAATGTTTATCAGTGTGTTATGAAATGGATAC
CGATATTTGTTATTTGCATGATGTTGATATGAAGACTTTACGCAGAGAAG
ATTTTGTTTATCGATATGATTGTCTTTATATGGATACGGT

Coding sequence (CDS) from alignment at sc0000129_pilon:639734..641273+

>MSTRG.15005.1.p1 ID=MSTRG.15005.1.p1|Name=MSTRG.15005.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=330bp|location=Sequence derived from alignment at sc0000129_pilon:639734..641273+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTTATCGTTCGATTATTCGTCTTCAATCTTCTTTACAATGAAGTACT
CAGTCAAGCTTTAAGTCGATACCTCCGTAAACAACAAGCAACATTCAGCC
AAAACGCACTCACTGGACAATGTTTAAAGAAATCACTTCATGAAGCGCTG
ACGTCAGTCAACAATATTGCGTACGATTCTTTATGTGCACAACACTGTCT
AGCGCATGCGCAATGTTTATCAGTGTGTTATGAAATGGATACCGATATTT
GTTATTTGCATGATGTTGATATGAAGACTTTACGCAGAGAAGATTTTGTT
TATCGATATGATTGTCTTTATATGGATACG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.15005MSTRG.15005Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.15005.1.p1.exon1MSTRG.15005.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.15005.1.p1.exon2MSTRG.15005.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.15005.1.p1MSTRG.15005.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000129_pilongenomesc0000129_pilon:639734..641273 +