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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000129_pilon:488753..491436+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.15000.1.p2 ID=MSTRG.15000.1.p2|Name=MSTRG.15000.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2684bp|location=Sequence derived from alignment at sc0000129_pilon:488753..491436+ (Clytia hemisphaerica_ch_hm2_pilon)
AAGAAGTGACTTATTAACGCAAAAAAGACTTCAAAATGGCTGATCGAAGA
TTGGCTGCTTCTATTCATGAGAATAATTCAATAAAAGACGATGATTGCTG
TTCAAATCACTTCCGAGTAGCTACAAAGCAAGatgtcGGTTGCAGAATTA
TGGACGGCAAAAATAAGTATCAAATTAATTCCATGCGACACGTCACAGAT
ATGAGTGAAGGGTTCTCTGCAAGAGCTCAAAGATATGAGGGCAAGTGTTC
TTTCATTATAAGTGAAACAACTACAGCTACAAATTTCTTTCAGTCAAAGA
TTTGTGCTCGAATTTTGTTCAATTTCGAATAATTCTCGATTGCTTTTGAT
AAACAACTGACGCACGActtgcaaaataattttcctataTTTCATTTTCC
AGTGACATACGTGTCTCCACGTAAACAAAACATCCTTCAACGATTATGGC
GCAGGTTGAAACGCGACAAATTGCGAAAACTCGCCAAGAAGTTAACGAAT
GCAGAGGAGACGATTGCTATTGATCGAAGGTGGTATCATAAATTGATTTG
GTGCAGAGGAGAGGCAGATCCAGACGATTTCTTGATAGAAGATTCTTTTT
CACTGCCTGCAGATGTTCGAGAAAGCGAAAGTCTCATAATTGGTGAGTCT
TTTACTTTTTCTCTGATTctaatttttctgtttgtttgttgaacataaaa
caataaaatgaaacCCGCCCAAACTGGCTTACATTTTCGCGGAATCGATT
GGAATAGTAGAACTTCTGAGAAAATTTCAGAACATTGGGTTTTAAGAACT
CAACTTTTCTAAATCCTTAATACTACATTGAAACTCTTATTTTAGCTGAC
ACGACCTTGTTTGTTGTTGGCAAACAAATTCCCACCAATCAAACCAATGA
GGAATGTGAATCACTCAGAATCATTTCTTCGCTTTCTGACAGTTCATCTG
AAGAAACAACCTCCATACAAAATGCTGTTCACCAGAAATTGATTCTTCAA
GACTCCGTACACCAGCCCAGATAAATAATAGTAATGAATTGGAAACAGTC
GGGATTGGAAGTGTGGTGGATTTCCCACCAGTCGAAAATACTATTTTCGC
AAAAAGGAGACCTCTTCCAAAAATCGCCAATAAAGGACCACACCCTTGGT
CTCATCAATTAACTGGCGGAGAAAAGGAACAACCTGCTCCAGTTATTTCA
AAACAACTCACCTCACGTCCTTTACCTAAGATCAAAGACTGTTGTTCAAA
TGTCACATTGGatgaaacaaataaaagttCTTTCGACAGTGGCATAGACG
AGTTCGCGGATGAAGTGAATGAGGAGATTGAACGCGCGATGCGCGCGGCC
TGTGCAAGGAACGTTCCCGCgaagaaagaaaataagaaacgtGAAGAGCT
GCTACTTTGCCAAACACCAAATTTGGAAAAAGGTCAATCTGGTTTCTCTT
GGCAATTAGATCATAAGTTGACTGGTCCCTGCAATAGAGCCAGTACCCCA
CGTCCACAACTGTCCAGCAGTACATTAAGATCAATGAGACGTCGTACAGC
AGTAGAGATATCTCTTGGACAACAATTGGCCAAGAAAAAACGCGATGAAC
TGATCGAAGAGAGGAATGCAAAAATCAATCAGCGTAAAGAACGCTTTCAA
GATTCTCAAGAAACGAAAGAACTTGATCATGAAGTACacaaacaaaaatt
gataaatgatCAACGAGAAAAAGATAGGAATCTCAGAGAACGACTTGATA
TggtgaaacaaaagaaacaacaaaaaggtTCAACTGATGTCAAATTGGCC
TTGGCAAGACAAAGACGTCAACAACAAGCTAAACTGGAGAACCAGGTAAT
AATTATTAATTAtctcaaaacattgaaaaagtaATCGCAGGTTCCCTCCT
TGAGGCTAAATATCGAATGCATTCTCCTAATCTTATTTATGTATAAACAA
AAactcatcttcttcttcttcagggACAGAAATCCTCAGTCGTCAACGCC
CAAGTCTCATCCACAAAAGCCGCTGGCTTCCGTTCAAGCgctcaaaaatc
aaagaaaggCTTTGTATCTTTCCAAGATTACGAGGATACGCCTGTCAATC
TCTCACTAACTCAGAAAGCTCAGAAAGATGACCTTTCTACCGGACCCAAA
AACGCCTTAGGATCAAACATGAAGGTCCATGCACCAGGACCTGTAAACGC
ACGcctgatgaaaatgatcacaaACCCAAAACTAAGACAAACGTCAACTG
AAAAAGAAATGTCAATCAAGAAAGCTCCATCCCTTACATCAGCTAATCGT
CCAAAAATCTCACGAGTCGTTTCACAGGAGCGAGTTTCATCTCCAGTTCA
CTTAAACGCATTCGATGAAACAGACACAAAAACAGTTCCATCATTATTGA
AAGTAACTCCTGTTCAAAAGCGATTTCCAATTGCCATGACAATGAAAGAA
GCGATTCACAAAGCAGAGGAGGCGAGAAAGGAACGAAAACAAAGAGAGAA
AGAGGAAAATGAAGAATACTGCAAAGAGTTCGATAAAGATTGGAATGACT
TTTACTCCGTTGATGATAAACACGACAAAATCGAAAGTCCTTCTTCAGGC
TATACTGAATATGaattttaaactcatttaaaaaattttctactaaaata
cttaaaaactaatcgaaatattttaactcctaac Coding sequence (CDS) from alignment at sc0000129_pilon:488753..491436+ >MSTRG.15000.1.p2 ID=MSTRG.15000.1.p2|Name=MSTRG.15000.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1872bp|location=Sequence derived from alignment at sc0000129_pilon:488753..491436+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTGATCGAAGATTGGCTGCTTCTATTCATGAGAATAATTCAATAAA
AGACGATGATTGCTGTTCAAATCACTTCCGAGTAGCTACAAAGCAAGatg
tcGGTTGCAGAATTATGGACGGCAAAAATAAGTATCAAATTAATTCCATG
CGACACGTCACAGATATGAGTGAAGGGTTCTCTGCAAGAGCTCAAAGATA
TGAGGTGACATACGTGTCTCCACGTAAACAAAACATCCTTCAACGATTAT
GGCGCAGGTTGAAACGCGACAAATTGCGAAAACTCGCCAAGAAGTTAACG
AATGCAGAGGAGACGATTGCTATTGATCGAAGGTGGTATCATAAATTGAT
TTGGTGCAGAGGAGAGGCAGATCCAGACGATTTCTTGATAGAAGATTCTT
TTTCACTGCCTGCAGATGTTCGAGAAAGCGAAAGTCTCATAATTGCTGAC
ACGACCTTGTTTGTTGTTGGCAAACAAATTCCCACCAATCAAACCAATGA
GGAATGTGAATCACTCAGAATCATTTCTTCGCTTTCTGACAGTTCATCTG
AAGAAACAACCTCCATACAAAATGCTGTTCACCAGAAATTGATTCTTCAA
GACTCCGTACACCAGCCCAGATAAATGGCTGATCGAAGATTGGCTGCTTC
TATTCATGAGAATAATTCAATAAAAGACGATGATTGCTGTTCAAATCACT
TCCGAGTAGCTACAAAGCAAGatgtcGGTTGCAGAATTATGGACGGCAAA
AATAAGTATCAAATTAATTCCATGCGACACGTCACAGATATGAGTGAAGG
GTTCTCTGCAAGAGCTCAAAGATATGAGGTGACATACGTGTCTCCACGTA
AACAAAACATCCTTCAACGATTATGGCGCAGGTTGAAACGCGACAAATTG
CGAAAACTCGCCAAGAAGTTAACGAATGCAGAGGAGACGATTGCTATTGA
TCGAAGGTGGTATCATAAATTGATTTGGTGCAGAGGAGAGGCAGATCCAG
ACGATTTCTTGATAGAAGATTCTTTTTCACTGCCTGCAGATGTTCGAGAA
AGCGAAAGTCTCATAATTGCTGACACGACCTTGTTTGTTGTTGGCAAACA
AATTCCCACCAATCAAACCAATGAGGAATGTGAATCACTCAGAATCATTT
CTTCGCTTTCTGACAGTTCATCTGAAGAAACAACCTCCATACAAAATGCT
GTTCACCAGAAATTGATTCTTCAAGACTCCGTACACCAGCCCAGATAAAT
GGCTGATCGAAGATTGGCTGCTTCTATTCATGAGAATAATTCAATAAAAG
ACGATGATTGCTGTTCAAATCACTTCCGAGTAGCTACAAAGCAAGatgtc
GGTTGCAGAATTATGGACGGCAAAAATAAGTATCAAATTAATTCCATGCG
ACACGTCACAGATATGAGTGAAGGGTTCTCTGCAAGAGCTCAAAGATATG
AGGTGACATACGTGTCTCCACGTAAACAAAACATCCTTCAACGATTATGG
CGCAGGTTGAAACGCGACAAATTGCGAAAACTCGCCAAGAAGTTAACGAA
TGCAGAGGAGACGATTGCTATTGATCGAAGGTGGTATCATAAATTGATTT
GGTGCAGAGGAGAGGCAGATCCAGACGATTTCTTGATAGAAGATTCTTTT
TCACTGCCTGCAGATGTTCGAGAAAGCGAAAGTCTCATAATTGCTGACAC
GACCTTGTTTGTTGTTGGCAAACAAATTCCCACCAATCAAACCAATGAGG
AATGTGAATCACTCAGAATCATTTCTTCGCTTTCTGACAGTTCATCTGAA
GAAACAACCTCCATACAAAATGCTGTTCACCAGAAATTGATTCTTCAAGA
CTCCGTACACCAGCCCAGATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000129_pilon | genome | sc0000129_pilon:488753..491436 + |
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