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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000007_pilon:953807..959905- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.1500.5.p1 ID=MSTRG.1500.5.p1|Name=MSTRG.1500.5.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6099bp|location=Sequence derived from alignment at sc0000007_pilon:953807..959905- (Clytia hemisphaerica_ch_hm2_pilon)
GGTTAGATAGAAAACTCAAAGCTTTCTTATTGTTGCACAATGCGCGGTTG
ATGATGGAACTTGTGCACAATCCGTAACTATGCAAGATGGCAAGATGCAC
CCATCAACTTCTGCCAAAGTAATCTCAATTCTCCAGAATGATCAAAGGTT
AGTTGTAACAAATGATTTTGCTCTTCTTATTCTTTTAAAAAAAATGTCTA
GAAATTGTTTTTGGAAGTCAGTCAGCCAGACTAACAATCATTTCTCTTTT
GATGAAAATTCTTTCTGCCGGGTACGAAATGGTAATTTACCCTTCTTTGC
TATTATTGAAAACAAAATCTTTAATTTTGAAAGGAGCTAAAGAGGGGTTA
AACATTTTTGAAACAATTTGGGCGTTACACAGAATAACTAATCCCCTTTT
CTTTCGCATGACTTAAAAAATGTTTTAAGCGACAGTCAGTATTTCGCTGA
CTAAAATTGGGACAACACTGTTAAAAATATTTCAGTTTTCAAAAATTAGT
TGATTTTTGGGATATTTGATATTAGACAGATAATTACTTGGAAAGGACTG
CCTACTTCTTATGATCATAAGAAGACAAGTTGAAGGGTAGACAGACATGT
AGACAGACGGACAGACAAAAGCATCCTTATATGGTGTTTCCAGAAGTTGA
ATAAGATTTCTTTGCTGACCAAGAATGACTCCTTTACCCGTTATCAATTG
ATTATGCTCTAAATTATGTAGTTAATGAATCCAGATCTACCTGACCCTGG
ATTTTTTTAAGTTCAGTCTGATTCCATATGCCTGTGATTCTCCAGTCAAG
AATAATGAGATTTCTTCTAAAGTCTAACTTATTGAGTTTAATTGTCCAAC
CTCGTGAAATCGACGGAAGACACGGCGTTGACAGGAAAGGACGTCAATGT
GCTCCGCGAAGGAGAGTTTGGTACAGACTATAACGATCTGCTCAGAGTCC
CATTCGATACCCACTGTTACTTATTTGCAATTTTTACTGGTGAATTACTT
TAGGCGTACAAACTTTTACGGGCAGAAAATTTATGACCGGATTTGAGGAA
AAAATGTTTTTCGTGAGCATAAACTTTCGCGAATCGTTGGATAAAAATGA
GAATTTTGGAATGAAAATTGCCTTAAAAGTGAAAAATATTCATTAAATTC
GATTAAGACGTATGCTCTTCGACTTAAAAAGGTGTTAAAGGATAACAATA
CGCCCAAAATTTGACATTTATTACGATTTCGAGGTTTTATAGATTTTTCG
CGAGTATAAACTTTCGCAAATTAAGAATTTTCAAAGACATTTACTTTCGC
GAAAAAGGCCAAAATTCGCGCAAATCGTGAAAGTTTCTGCTCGCGAAAGT
TTGTACGCCTAAGTACCTCTTTCATGATCGCTGTGATCGTCTTCCCAATA
TTTTCATTTGTTTCTTGCAAACCCTTCTCTTGCAGATATTTTACCACTGC
AGAGCAATGGAGGTCATTCGAAAGAAATTGGGAGGATTGAAATCGAAATT
AGACGAAGCAGAAAGGCAAGCAAATGCCACCGAAGATGAACTCAACTCTA
TTAACGAAAAAGCTGATGATGTGAGTGCATCATTCCGTAATTTCTTACGG
AATCTATCTTTATCGTGAATAATCAATAAAATTATACGATATCTATGAAG
AAGAAAAATCTAAAGCAACACAAGTGACACTTTGTGTCCATTTTGTGATT
CCCTAGAATTAAATGCAGGGCTTTTCGTCTTTTCGCGGGTGTGACCGTGT
TGACGATTTTCCTTATCCACTATTTTTTTAAATTTGGTGATTTATTTTAT
TGTCAGGGCCCACGCCATGAAATTGAAAGTTGCGGGGCAATGAATATAGA
GTCTAAGGAGGCGCAACCAAAAATTTTTACTTCGCAAAATAGTTGGCGAT
GGCGTGGGCTCTGCTTGTAAGATAGCTAAACGTTGTTTTTGAGGTTTTGT
CAGTCTGTTTGTTTGCATATCGTCCATTTTACAGACGGAAGAGCAAGTGA
AATTGGTTCAAGATAAACTGTCAAGCATCGAAGAAGAGCTAGACGATACA
GAACGACGTCACGAGACGGTCTCACAGAAGTTGGTGGAACTGGAAGTACG
AGGTGACGAAGTGCAAAGACAGTACGGTGAACTGACCGCCAGAAGCGAAA
CGGACCAAATAAAGATTGATGCGCTGGAAGAACAATTAAGTGAAGTCAAA
AGTAAAGATGAAGAACTCAGTGCAAATTATGAAACGGTAAGAACTATTCG
CCCGTGTTTACTCTAGAAAGATCTTTATATTAGATCTATACATAAAAATT
TCCTAATTTTTTTAATATTATTCTAGAAATAAATTTCTTAAATTTCAGAT
TGTAGGCGGATGGAAGGCCAAGTTTGTGGAAATTTAGGTAAAAATACCAA
AAGCATAATTTTTGGAAATTGAACAAAGTTCTTACCCTGAGTATCAGAGG
TTGAGAGAATATTTCAACCTCTGAAGACCAATAATAGAAATTTTATCGCG
CATGTATCAATCTAATCACTGTAGAAAGAATCAAAGATGAAGAGCAAATA
TTACCTTATTAATGTCTAGCATATTGTATCAGGATGCAGTTTACTATTTA
CGAATTCCCCAGAAACTTCCAAGTGTAATTGAAATGAGTTTCTTCCAAAA
TAAATCTTTTACATGATCCCCAAATGTATAACCAGTAATTACTAAACTTT
TAATTATGGAAATGTCACTTTAATTGAATCAAAATTATAGACAGACTTTA
TGTTATGATTCTCTATGAGCCCCCCCAGCAGTTTGCATGATGGCATGATT
GGGAATTTTTTCTTGCGTGATGGCGTGATTAGAGATTTTTTTGGCGTGAT
GGCAAAAATTTGAGGCGTGATCTGGGCTATTTTTCGCTATTTTTAGCGTC
ATGACAGATTTTAGCAATTTTCGTGATGCGTGATGGAGAAAATCTTTTTG
CGCGATGGCGTGATCAGGGGTGCCGCTGGGGGGGCCTCCTCTATCACTGA
CTCTTTTTAAAAAGCATTAATGACATTTTTGAGTTGTGTTTTCAACGACG
GGAATAAAGATATCAACTTTGAAATTCATCCAAGATCTTGGATGGTCGTC
ATGGTTACTTTTCTCTGCGTTGATTGCGCGCTGAATAGAATCTGGATTGG
TCGGCACAGCGTCGATATATGATTTCGACCTGTGCTTTTCACGGTACAAA
TTTTGGTTTTCCCAAAAACAGTTTCCTTCAACTCAGCAATTTCGTACCCA
GTAAAATATAATCTTTCAAAGGCACGGGAAGATGTTCAATTTAAGCAAAA
CTAGTAAGATCTAGCTGCAGCAGATTTTTTTTCCGTACATGGACGGAAGT
ATCATCGACGGTCGGGAGTATCTCATCTTTGTTGTTTGGTTTTGTTGTTT
GGAATTGCTTAGGTCACGGTTGGTAGTAACGGCTTGTCACTGTGCCGGGT
GCATACTCGGCGCCTTGGGCCCCGCAGGGTTGCTAGTAACGGCTCGAATT
TCAGTCAGGTTTAAAAAGGGGCAATTTTACCCATATTATAATAACATTAC
CCCCGTCTTTTTTGTCATCTTATAAGTATTTCCTAATTTTGTGTTGCTGT
GCGAGTGTGGCTCAACGGATAGCGCTGTGTTTCTGATCAGAAACTCTTTC
ATTTGGTGGGTTCGAACCCCGGTCGGGTCGATATTTCAAGGTTTCAGATA
AGTTTAAGATACTTCCGTCCGTCGATGATACTCCTGACCGTCAAGATGAG
ATACTTCCGACCGTCGATGATACTCCTGACCGTCAAGATGAGATACTCCC
GACCGTCGATGATACTTCCGTCCATGTACGGAAAAAAAATTTGCCTAGCT
GCAAGTATACTTTCATTAACGATTTGATTGCAATCACGTCGGTCTTTTTG
TTTTTCAGATCAGTCAAGAGTTATCTGAAATAGAAGCCACTTATGATGAA
GAAGAAGAACGATGTCAGGAAGCTGATGTGTAAGAATGAATCTCTTCCCA
TGTTTGAATTTCTTCAAAATAATTCGAACCCTGTCTCATGGCCTCGGTGA
AACTCTTCAGAAAGCTTGGGAAATCATTTTGTCTCCGCTTAAGGGCTCTG
ACCATAGTGAATTTTTTCATAATTGACGTGTTTAAAATGTGTTTTCTGAC
TGATGTAACCAACAAAACTATGGCATGTTATACATTTTCTGTTAGACAAA
CTATTCCTGAATCTGAAAATTCAAAAATTGCATTGAAAAAGTTTGATGAA
GAAGAAAATGAAGACTTTTGCGAGGAAGAGTATCTCAACTTTGAAGAGCT
TAGTTTCGGCGAAGAAAAAACATTTTGAAACAATTTTTGCAGTAGATGGT
GTATCTTTTACCGAACAATAAAAATTTTTGCGGAAAATTTTTGTAAATGC
TTCTTTGTCTCGAAATCTTCAAAATAGTGGTTTTTCATCAATTTTTCATC
CAAATTTTGCTTAAAAAAACAGTAATAACTTTTGACACACCTTTTTAGAA
AAATTTTCCGCAAAATTTAAAATAGTTCAATTCTTTGCGGACAGTGTAAA
GAAATTTTGAAACAAAAAAGTTAATTACCCATTAAAACTAAGCACTTTTT
GTAAAAGAGGGTGATGCAACATATTATTAACATCTTTTTAAAGTTCATAA
CGTCATTTTTGCAATTAAATTCTTAATTACTCTTAAGGGGTTCGATTAAA
AAGCAATTTATAAAGGCAATTCTTTGTTAAAAGTGTTAAGGAACCTGAAA
TATAACTTTTATGTTCAAATACCAAAATCAATTTTTGGACTATGGTCAGA
GCCCTTAACTCTCAATATATCCTTGATCCGTCCGACTCTGAACTAAATTT
TTGTGAACTGAATTTCTACCAACAGTATATAACTCTATTTAGTCGCGTCA
AAACATTGGAAGAAAAATTCATTCAACTTGGCAATAATAGACGATATCAG
CTTTCGATAAATGCAATGCATTCTGGTTTCTAGGGACTCTCAAAGGAATT
ATAATCTATTATAATTGATCTATTATAATTCCTTCGAGAGTCCCTAGAAA
CCAGAATGCATTGCATTTATCGAAAGCCGATATCGTCTATTTGAGAAGCA
TGGAACGATATGAAATGAAATCCAACGAACGAGGAACAGAAATTCAAGAG
AAAATTGAAGAACTTGAAGCAAAATGCGCGGAGGTAAAGATAAGAAAAGT
TAAAAAAATCCTTCCACCTATGCTAACCGGTCTCTCTAACTGAAATAAAT
GACTGTTCCCCATGATGTTTTACTTACTTGATTATTTCTATTTCGTCAGG
CGAAAGAGAAAGCAGAGCAATACGAAGCAAAGTCCAAAGAAATGGAAGAT
GAACTCGAATCTTTAGAACGTAAGTTTTTTGATTTTTATAGACATTGGAC
TATAACAACTACAGTAAGACACTTGTACCAATTTTTTATGGCAAGAATCT
ATTTGAGGAAAATTATAGATATCAACTCCTCCTTGGGCAACAAATCAAAC
TTGGCTTTAGAACACAATCCTTTTCCGAGGACGACTTTGCCCAAATACAC
CAGTGAAACATTTTCACTTACTGAGGATTAAAACCTCAGCGTATGAAAGT
ATTTTTCTGACGGGGATGACTTAACTTTATCACCAAATTTTCTTTTTTTG
AGAAGTGTCGAGCATGTGGCATACTAGTGGGTATTAGACAATTTCAAATA
TTTTGTTTAGCTATTGTTGAAAACAACACAACCTTTTGTCTTTCCAGACC
ATTTTCTTCAAATCATTGACATTGACGAGTATTATTGAATAACTTTTTGT
TTGTTTTATCTTTCTTAGAACAATGCCACGACGAAAAAGAGCGTTACTTT
TCATGCAAGGGTGACTTAGAAAGAATATTGGAAGAAGTTCAAGGAATCTA
AAAAAAACAAAGTGATTTTTTTTGGTTTGTAGCACGTTAGCACAGATTTG
TACATTGAGAATTATTACTGTATTTTGTATAATAGATATCCGAAACATAT
TTCATTTCACAAATCAATCTAATCTTAATCATTCCCTTGTTACCAAGGAT
GATTGCGAACTCCTATCAAGATGTCATCTTCTTCACTACATAATGTTTC Coding sequence (CDS) from alignment at sc0000007_pilon:953807..959905- >MSTRG.1500.5.p1 ID=MSTRG.1500.5.p1|Name=MSTRG.1500.5.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2112bp|location=Sequence derived from alignment at sc0000007_pilon:953807..959905- (Clytia hemisphaerica_ch_hm2_pilon)
TCGCGTCAAAACATTGGAAGAAAAATTCATTCAACTTGGCAATAATAGAC
GATATCAGCTTTCGATAAATGCAATGCATTCTGGTTTCTAGATCAGTCAA
GAGTTATCTGAAATAGAAGCCACTTATGATGAAGAAGAAGAACGATGTCA
GGAAGCTGATGTACGGAAGAGCAAGTGAAATTGGTTCAAGATAAACTGTC
AAGCATCGAAGAAGAGCTAGACGATACAGAACGACGTCACGAGACGGTCT
CACAGAAGTTGGTGGAACTGGAAGTACGAGGTGACGAAGTGCAAAGACAG
TACGGTGAACTGACCGCCAGAAGCGAAACGGACCAAATAAAGATTGATGC
GCTGGAAGAACAATTAAGTGAAGTCAAAAGTAAAGATGAAGAACTCAGTG
CAAATTATGAAACGATGGAGGTCATTCGAAAGAAATTGGGAGGATTGAAA
TCGAAATTAGACGAAGCAGAAAGGCAAGCAAATGCCACCGAAGATGAACT
CAACTCTATTAACGAAAAAGCTGATGATTCGCGTCAAAACATTGGAAGAA
AAATTCATTCAACTTGGCAATAATAGACGATATCAGCTTTCGATAAATGC
AATGCATTCTGGTTTCTAGATCAGTCAAGAGTTATCTGAAATAGAAGCCA
CTTATGATGAAGAAGAAGAACGATGTCAGGAAGCTGATGTACGGAAGAGC
AAGTGAAATTGGTTCAAGATAAACTGTCAAGCATCGAAGAAGAGCTAGAC
GATACAGAACGACGTCACGAGACGGTCTCACAGAAGTTGGTGGAACTGGA
AGTACGAGGTGACGAAGTGCAAAGACAGTACGGTGAACTGACCGCCAGAA
GCGAAACGGACCAAATAAAGATTGATGCGCTGGAAGAACAATTAAGTGAA
GTCAAAAGTAAAGATGAAGAACTCAGTGCAAATTATGAAACGATGGAGGT
CATTCGAAAGAAATTGGGAGGATTGAAATCGAAATTAGACGAAGCAGAAA
GGCAAGCAAATGCCACCGAAGATGAACTCAACTCTATTAACGAAAAAGCT
GATGATTCGCGTCAAAACATTGGAAGAAAAATTCATTCAACTTGGCAATA
ATAGACGATATCAGCTTTCGATAAATGCAATGCATTCTGGTTTCTAGATC
AGTCAAGAGTTATCTGAAATAGAAGCCACTTATGATGAAGAAGAAGAACG
ATGTCAGGAAGCTGATGTACGGAAGAGCAAGTGAAATTGGTTCAAGATAA
ACTGTCAAGCATCGAAGAAGAGCTAGACGATACAGAACGACGTCACGAGA
CGGTCTCACAGAAGTTGGTGGAACTGGAAGTACGAGGTGACGAAGTGCAA
AGACAGTACGGTGAACTGACCGCCAGAAGCGAAACGGACCAAATAAAGAT
TGATGCGCTGGAAGAACAATTAAGTGAAGTCAAAAGTAAAGATGAAGAAC
TCAGTGCAAATTATGAAACGATGGAGGTCATTCGAAAGAAATTGGGAGGA
TTGAAATCGAAATTAGACGAAGCAGAAAGGCAAGCAAATGCCACCGAAGA
TGAACTCAACTCTATTAACGAAAAAGCTGATGATTCGCGTCAAAACATTG
GAAGAAAAATTCATTCAACTTGGCAATAATAGACGATATCAGCTTTCGAT
AAATGCAATGCATTCTGGTTTCTAGATCAGTCAAGAGTTATCTGAAATAG
AAGCCACTTATGATGAAGAAGAAGAACGATGTCAGGAAGCTGATGTACGG
AAGAGCAAGTGAAATTGGTTCAAGATAAACTGTCAAGCATCGAAGAAGAG
CTAGACGATACAGAACGACGTCACGAGACGGTCTCACAGAAGTTGGTGGA
ACTGGAAGTACGAGGTGACGAAGTGCAAAGACAGTACGGTGAACTGACCG
CCAGAAGCGAAACGGACCAAATAAAGATTGATGCGCTGGAAGAACAATTA
AGTGAAGTCAAAAGTAAAGATGAAGAACTCAGTGCAAATTATGAAACGAT
GGAGGTCATTCGAAAGAAATTGGGAGGATTGAAATCGAAATTAGACGAAG
CAGAAAGGCAAGCAAATGCCACCGAAGATGAACTCAACTCTATTAACGAA
AAAGCTGATGAT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000007_pilon | genome | sc0000007_pilon:953807..959905 - |
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