MSTRG.1500.1.p1 (mRNA) -

Overview
NameMSTRG.1500.1.p1
Unique NameMSTRG.1500.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000007_pilon:944753..947677-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.1500.1.p1 ID=MSTRG.1500.1.p1|Name=MSTRG.1500.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2925bp|location=Sequence derived from alignment at sc0000007_pilon:944753..947677- (Clytia hemisphaerica_ch_hm2_pilon)
TTTTTGTACTGTATGTTGTTCAAATAAAGTTTAAAGAGATGTTGTGTTGT TTTGATATGTTTTAGTTGGATTGCAAGTTTGCACAAAAGTTTGCATGACG AGTGTTTTAAAATAAAAAGAACAGGTTGAAAGGTAGGGGTTTCTTTCTTT AGCTTCAAATCGTGATCTTAAAATCTTGAAATTCTACCATCATCGGAAGG GTTAACATTCTATTCTCATTCCTCTGTTAAGAAAGGTAAAAATTTAAATC GTCCCTATTGCACCTATCAAATGTAATTCTCACCGGGTCACTGAGACAGG GATGGGTGGTTTGAATTTTCTCTGTTTATGACTTCTATTATTTCCATTAT TAATCCTAGAAAACTTGCATTTCACGAACAACCTCGTCATTATAGATGAA AGCTACGCTTGGTCAAATGTCCTAGTCCCCTAAGTTTTCTCATAGCCTGT GTCACTTTAATCCACTTTATACAATTTTCAGAGGACATTTTGGTATCGAA CGTGTTTGACGAAAGCGAGGATGGCAGACATCGTTCCCAAAGGACTATCT GATCTTTTAAATCTGAAGATTGTATTGACACCATCTGATCCTTCCATCAA CACTGGCAAACCTTTACCTGTTCTTGATCTGGATTCGTTGCACAAATACA GTCTGCATTGGGTGTCCTCTGACGGTAACAATAATTCGGCTGCTGCTCCT TCTTCATCACTCCCTGGTCAAAGAAACTTAGCAACTAATGCTCCACCGAC CGGAAGCCCTGCTCAAAGGGGTCTGGCTACAAATATCCCTACAGCTCAAG CTGCCATCTCTGGTCAGAGGAATCTAGCAAGTAACAGACCTTCGGATAGC AATCCTGGTCAATCGAATGCCAGTGGAGATATCACTTTGACGGTGAAAAC TCTCACCGGAAAATCAACAATGGTGAAAGTGAAACCTGACAGTCAAATCT CAGACGTCAAAGATTCGATTCGATCATCTGACGGACTTGGATTATCACAA GGCCTTAAACTTTTGCATCTCAACAAAAATTTGAAGGATGAAGCCACCCT TAAGGATAGTTTTATTACTGAGAATGCCACACTGTTCATGATCATCAGTG CTGAAACTGTTGCCCCTGCTTTTTACATGAACGCCGAAACTTTCCTTCAT CCGAAGTATGATTACCAATACGGTGCAGCTGACAAAACGCAATTCTCAAG GGGAAATCGACGATTCATTCGACCATGTGGATGGATGAAAAAAGCATTGA GAGTGCTTGGAAAGTATGAAAACAACACGTGGCTTGGAGTCGCAGGGCGC CAATCAGAAACGCAATCCGCCGGTGGTGAATGGCCAGTAGCATACCATGG CACTAAGAAAGGAGACGTTGAGAAACTTTGCAGGGAAAGAAGCAGAAACC CAGTGCACCAGGGCCAAAATTTCACTCCAGGAAAAGGGATCTATACAACG TCTTCACCACACTTGGCCGAACAGCAAACAGAGAGTTTTGATTTTGAAGG ACACAAATACAAAATGATTTTCATGGATCGTGTAGATATGAGTTACACAG CAGAGTACAAAGTTCCTAGTGGTGGTCAAGACACTTATTCTATCACATCA GAAGAACGAGTTCGACCTTATTGCATTCTTTTCAAGAAAGTATAATTCTA AAGGATGACAACCGACCTTGAGTGATCAAAATGTTATTGAAATGAAGTGG GACTTTGTAATTTTATGATTGAATGGAGGGACTGTTTTTCTAACTCAGGG GTTCAGAACGGCAGCCTTTAAAGGAAGATCTGCGCATCCTCCTTTGCGTG ACAAGAGCAGACATTTCCTTTACATGTAAGCTTTTGTCTCATTTTTCTTT AACCTAGAGCTGACTCTATAATTTAGAAATTTACAATTTGAATTTATAAA AATGCCTTTAAATTCTTGTATCAAAAATTTGTTTTATCATTCTTAGAAGA CTTGTATTCGGTTATTGCTGAGGTCTGACACAATGATATATCCATTCTGT GTGACGGAAACACTCTCGGGGAAGGAGAGTTGACCATCCCCATTCCCCTC AGAACCAATACACTTAATCATTTTCCCTGAGTAAGTCAACACTTGGAGTC TATGATTTCCCATGTCAGACACAATAATGTTATTTGCAATATCCATAGAT AAACCACGCGGGTGATTGAATTGTCCATCTAATTGTCCTTGTACTCCAAA AAGTTGGATGAATTTCCCACGTTTGTCGAATATTTGAATCCTGTGGTTTT TCGAATCTGACACTAGAATATGTTCTTTATCCGGGTTGACTGCCACATAA CATGGGGAATTAAATTGTCCTGCGCGATCCCCTTGGGAACCAAATTTCAT GATAAATTTTCCCTCGGCACTGAAAATTTGTATTCTGTGATTGTCAGTAT CAGCCACAATAATTTCACGAGACGTTTGGGAGATTGTAATTCCCCATGGG GATTTAAAAAGTCCGTTTTTAGTTCCTTCACGACCGAATTTAGCGATAAA ACTTCCGCGTTTTGAAAACACTTGCACTCGGTTGTTTCCGTTATCACAAA CAGCAATCCGATTGTTAGGGGAAACTGCGACGTCTGTAGGGCAGTTGAAT TCCCCTTTTCTCTCCCCATGGGACCCGAACATGTTAATAAATTCCCCTCT TGGTCCGAAGGTTTGAATCCTGTGGTTATAACTATCTGCAACAAACATGA AGCCCTCTGAGTCACTCGCAACACCGAAAGGAGATTTGAATTCTCGCTTT TTAGACCCGTATTGCCCGAACTTGAATAAAGATAACCCGACTTCATTGTA TTCTCGTCGATTAGTGACGATGATTGGAAAAGGGCTTCCCCGAATCGGTT TTTCTTTGATGGTGACTTCCAGCATGTGTTTCCCACTAATATCAGGTGTG AAGCGGATGGAATACGTGCCATCAT

Coding sequence (CDS) from alignment at sc0000007_pilon:944753..947677-

>MSTRG.1500.1.p1 ID=MSTRG.1500.1.p1|Name=MSTRG.1500.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1125bp|location=Sequence derived from alignment at sc0000007_pilon:944753..947677- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCAGACATCGTTCCCAAAGGACTATCTGATCTTTTAAATCTGAAGAT
TGTATTGACACCATCTGATCCTTCCATCAACACTGGCAAACCTTTACCTG
TTCTTGATCTGGATTCGTTGCACAAATACAGTCTGCATTGGGTGTCCTCT
GACGGTAACAATAATTCGGCTGCTGCTCCTTCTTCATCACTCCCTGGTCA
AAGAAACTTAGCAACTAATGCTCCACCGACCGGAAGCCCTGCTCAAAGGG
GTCTGGCTACAAATATCCCTACAGCTCAAGCTGCCATCTCTGGTCAGAGG
AATCTAGCAAGTAACAGACCTTCGGATAGCAATCCTGGTCAATCGAATGC
CAGTGGAGATATCACTTTGACGGTGAAAACTCTCACCGGAAAATCAACAA
TGGTGAAAGTGAAACCTGACAGTCAAATCTCAGACGTCAAAGATTCGATT
CGATCATCTGACGGACTTGGATTATCACAAGGCCTTAAACTTTTGCATCT
CAACAAAAATTTGAAGGATGAAGCCACCCTTAAGGATAGTTTTATTACTG
AGAATGCCACACTGTTCATGATCATCAGTGCTGAAACTGTTGCCCCTGCT
TTTTACATGAACGCCGAAACTTTCCTTCATCCGAAGTATGATTACCAATA
CGGTGCAGCTGACAAAACGCAATTCTCAAGGGGAAATCGACGATTCATTC
GACCATGTGGATGGATGAAAAAAGCATTGAGAGTGCTTGGAAAGTATGAA
AACAACACGTGGCTTGGAGTCGCAGGGCGCCAATCAGAAACGCAATCCGC
CGGTGGTGAATGGCCAGTAGCATACCATGGCACTAAGAAAGGAGACGTTG
AGAAACTTTGCAGGGAAAGAAGCAGAAACCCAGTGCACCAGGGCCAAAAT
TTCACTCCAGGAAAAGGGATCTATACAACGTCTTCACCACACTTGGCCGA
ACAGCAAACAGAGAGTTTTGATTTTGAAGGACACAAATACAAAATGATTT
TCATGGATCGTGTAGATATGAGTTACACAGCAGAGTACAAAGTTCCTAGT
GGTGGTCAAGACACTTATTCTATCACATCAGAAGAACGAGTTCGACCTTA
TTGCATTCTTTTCAAGAAAGTATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.1500MSTRG.1500Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.1500.1.p1MSTRG.1500.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.1500.1.p1.exon2MSTRG.1500.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.1500.1.p1.exon1MSTRG.1500.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000007_pilongenomesc0000007_pilon:944753..947677 -