MSTRG.14997.2.p1 (mRNA) -

Overview
NameMSTRG.14997.2.p1
Unique NameMSTRG.14997.2.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000129_pilon:448074..449834+

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.14997.2.p1 ID=MSTRG.14997.2.p1|Name=MSTRG.14997.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1761bp|location=Sequence derived from alignment at sc0000129_pilon:448074..449834+ (Clytia hemisphaerica_ch_hm2_pilon)
AAGAAATGGAATAAGCCACAGCTGCTGCCTTTAACCGAGGATTTAAagaa gctgaaaaatcacctcCTCGACATCCGCCAGGAGTCGTTTGATGCGCTGG CCCGCGACAACTCGGATACAAAAGCTTGGCGAAACCTGGCCACTGCAACC CTGACAGCTATCATTCTACTTAACAGAAGACGAAGTGGGGAAGCTGCAAA ACTTAAAACTGCCAATTTCGAGGAAGcactaaaaaatcaaaaagtaaaag TTCATCCAGATATAGAAAAATCCCTATCTCCTTTTGAACTCGAGTTGTGC AAGATATTTAAGCGTCTGGAAATCCGAGGAAAATTTGGTCGAAAGGTTCC AGTCCTCCTAAGCAAAAAGTTAGCCGAATCAATGGATATTTTAGCTAATA CTCGAAAATCAGTTGGAATATTTGAGGATAACAGATACTTTTTTGCTGTA CCCCACTCACTACATTATCTCCGTGGCAGCGATTCTATACGCAAGCATGT TAGATTGTGTGAATTATCTTGCCCCGTGGCGATTACGTCAACAAAGTTGC GAAAGCATGTTGCGACTCTAAGTCAAGTCTTGAATCTTCAAGAAAGCGAG GTCGAAATGCTTGCGTCATTTCTAGGGCACGACGTCAAAATCCACAAAGA GTACTACCGTCTTCAGGAATCTACCCTACAAGTTGCAAAGTGTGGCAAAA TCTTAATGTTGTTGGAGCAGGGAAAGATGGCGGATTTCGCAGGAAAATCA TTGAGTGAAATTGATTTGGATATCAATGGTAGGTGAATTAATGTTTATAA ACgtccaaaaatttaaattcaaattttacgaGGAATCAatgggctctgac catagtgagtTTTCGTAATTTGGCATGCACTAAATGCTAATTTGTGCATA TTATATAGACCGTTAAAGTATATGATGTTATGCATTTTCTGTTAGACCAA TCATTTGTGAATCCAggtgaatctaaaaatatagaaatcgcaaggaaaaa gtttcatgaaaaagaaatggaagaCTTTGGCGAAGAAtagtattttaaga aaaatgttGGCTTAAATGTCTACTAAGgaactaaaaatagattttcgaaa aatatttgttaTCGCTTCTTTGTTTCAAAATCTTCAGAAGagtgcttttt gaaaaattttcaatagtgcatttttctgtgaaaaaaaatccaattaaAAA AGTATGAAGGGTAcgcattttttgtaaaaagtataTGATTAACTTCGTAC CACACTTATATATCAGTTAAACTTAATATTTCTAAAGCAGTTTGTTCCTA CAcatgtcaaaaatttttcaatttcacataaggttttttattcaaattag aaaattgattCTTCACTATGatgatcagagcccttaaggaaaAAACTTAT TTCGTGTGCAtctcatttgattttttcaattttaaatggcAATTTTTCAC AGTATTGTTAGGCTTCGGaaactgattctaaaaatttatctcaaagctgg tgaaatttgtttaatTGCTGTAACATTTATCTCGATTGATACTACTGTTT GCCATGGTATATCCTTCCGTTGAAAGATTTACCCAAAGAAATTGGttaat gactttttttcttctagAAATTCACTCTGACTTGGAGGATGGTGACGACG ACGATgaggtcgagagcgatagtgaggacgaggagaacgaagaggaagag gaagaggaagagaaagagaaagagaaagaaaaagacgaaaacctaccaaa atctataaaag

Coding sequence (CDS) from alignment at sc0000129_pilon:448074..449834+

>MSTRG.14997.2.p1 ID=MSTRG.14997.2.p1|Name=MSTRG.14997.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=648bp|location=Sequence derived from alignment at sc0000129_pilon:448074..449834+ (Clytia hemisphaerica_ch_hm2_pilon)
AAGAAATGGAATAAGCCACAGCTGCTGCCTTTAACCGAGGATTTAAagaa
gctgaaaaatcacctcCTCGACATCCGCCAGGAGTCGTTTGATGCGCTGG
CCCGCGACAACTCGGATACAAAAGCTTGGCGAAACCTGGCCACTGCAACC
CTGACAGCTATCATTCTACTTAACAGAAGACGAAGTGGGGAAGCTGCAAA
ACTTAAAACTGCCAATTTCGAGGAAGcactaaaaaatcaaaaaGGCACGA
CGTCAAAATCCACAAAGAGTACTACCGTCTTCAGGAATCTACCCTACAAG
TTGCAAAGTGTGGCAAAATCTTAAAAGAAATGGAATAAGCCACAGCTGCT
GCCTTTAACCGAGGATTTAAagaagctgaaaaatcacctcCTCGACATCC
GCCAGGAGTCGTTTGATGCGCTGGCCCGCGACAACTCGGATACAAAAGCT
TGGCGAAACCTGGCCACTGCAACCCTGACAGCTATCATTCTACTTAACAG
AAGACGAAGTGGGGAAGCTGCAAAACTTAAAACTGCCAATTTCGAGGAAG
cactaaaaaatcaaaaaGGCACGACGTCAAAATCCACAAAGAGTACTACC
GTCTTCAGGAATCTACCCTACAAGTTGCAAAGTGTGGCAAAATCTTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.14997MSTRG.14997Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.14997.2.p1MSTRG.14997.2.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.14997.2.p1.exon1MSTRG.14997.2.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14997.2.p1.exon2MSTRG.14997.2.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14997.2.p1.exon3MSTRG.14997.2.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000129_pilongenomesc0000129_pilon:448074..449834 +