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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000129_pilon:288713..292284+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.14993.1.p1 ID=MSTRG.14993.1.p1|Name=MSTRG.14993.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3572bp|location=Sequence derived from alignment at sc0000129_pilon:288713..292284+ (Clytia hemisphaerica_ch_hm2_pilon)
TTGTTTAAAGTGACTATCCTGATTTTCCTGAAAGGAATTAACATAAATTT
CCGTTTTTACATGGCGCAACAGCAGCTTGGTTACTGGTTGATACCGCATC
CGATTTAAAGCTCATTGGCTACGACTCTACGATTCACAAACGTATGACCG
ttttttactcgacattctgagttttttttattttgagaagtttttttctt
gtctcgttttttcttgatatttgagattttgtgattttctctgctgagat
ttttctgtaattcttgagatCATTACTCCAAGATTTTATCTTTGATTCTT
GAGACTTTTTGCTCCAAGATCTGTGTTTTTACTCGTTTTTCCTTTCTGCC
TGGGTGGTGAAAGGGCTTTGTTTCTGTATCTCCGGTCCATAGGATTAGGC
CTGTTCAAAGTATTCCTTATTCGTTTATTCTTCccggttgttttttttct
cctgtgGGAAGAGGAGaacataaagttttgaattgcgattctgaattttt
tcttgacgatttttttttcgaaattccgtCTGAATTCGTAGTTTTATTGG
ACATTTtactgacaattttttttttgacagatattttttttgttttgatt
ttttgcactcaAGAAATTCTGTTTAAAGTAGAtttttttGGCTAGAGAAG
TTTGCTTATACTTTCTcgtttttgtccaattttaaaGTTTCCTGCTTTAC
TATAGTGAATCTCTCTTTCTATTTACTCTTGGCTATATATTGTGATTGTG
TTTCGCTagagtttttctttcaaaaggtgAGGATTGGTGGAATTCTATTG
TTTGAAGTTTCCCCATCGTTTTTAGATCAGCTGTTGATAGCtgtatttga
gattttttatttaatttggtaatttgatttggtgttgaaattttcctttc
cttgattgGCACGCGtcggaaaatttccaaatctttTCTTTCTCTGATTT
AATTGGCTTTTGTTTGAAGTTTCCGTCTTTTATATCACCATGACACTGGA
TCGAAAACTCAAGCGGAGAGAAGGCCTTAGAGCTTTCTTAAAGTCCACTA
TGGAGAATATCGAAAAGTATCTTAAAGGTGATGACATTTCTGAGGCAAGG
TTAAGATCCTTTAAGTCTATGCTAGAATCCACTTGTGCCCAACTTTCCGA
CATCAATAAAGAGATTCTCCCACTTTTAGACCCTGAAAAGATCAGTGACG
ATGTAGTTCAAAGCATGGGATTAATGCTTCCTGCAACTGAGATCGATGCT
TGTCTTGACATTAAGCTTTTGGAGATAGCAAAATCGAATGGCTCCGCTTC
TGTTTCTTTGCCAACTGCATCCGTTTCTTCTGGGACAAGTGTTTCTCGAC
TTCCAAAGATAGAGCTCCCTACGTTTAAAGGTGATCCGCTCAAGTGGCAA
GGGTTTTGGGATCAGTTCAAGATTTCCATCCACGAAAATGAGCGCATAAA
CGACATTGACcgctttaattttttgaaaaaatatttggctGGCGAAGCCT
TGGATTCGATTAAAGGTTTGACTCTAAACTCTGATAATTACAAGGAAGCC
ATAGAAATATTATGCGAGAGGTATGGGAACGAGCAAGTTTTGATTTCGTC
ACACATGCAATCCCTCTTGAGGATACAGAAGATAAGATCAAAAGACAACA
TAAAGAGCCTTCGAACGCTTTACAACCACGTTGAAAGCTGTGTGCGAAAT
TTGAAAGCCTTGAAGCTCGAAGCTAAAGGTTATGGCAGTCTTTTGATCCC
tatcttaaaagaaaaactccCTGACGAGCTAAAAATTGTGATCTCTAGGA
AGTTTGGAAGTTCCATCTGGACACTAGATTTATTGCTCACTTATCTCAAT
GAAGAACTTAGAGCTCAGGAAAATTGCACCAATTCTGGTGGCGGAAAAGC
TGAGCGAACTGATGAGAGTGATCCACTTTATAGTGCCCTTGGTCTTTTTT
CTAATACTGAGAAGAACGTCTGTGtcttttgtaaaaagagtcacaGCTCT
GCTAAATGTCGAAAGGTCACAAATACACAGTCACGTCGGGATATTCTAAT
TAGAGAAAAGAGGTGTTTTGTTTGTTTGGCTCGTGGACATCGTTCCAATG
CTTGTAGAGATAAGTACTCATGTAATAGGTGTAACAAGAGGCATCACATT
TCTATTTGCGATGAAGGTAAACAAAGATCTGAAGCTGATAACATTTCTAA
CAATCAGATCTCGATCTTGACCGATGCAAATAGTGAGCCTCAGTCTGAAT
CCAAAGCTCCTTGTAGTTGTAGTTGCAACTCTGTTCCTACTCCTGTTTCT
CAAAATTGTGCTCAAGTTTCTTCACGTAGCGTTTTGTTGCAGACTGCAAC
TAGTGAGATCTTTGGTTCCAGTTGTCACAACAGTGTGAAAACAAGATTGT
TGTTCGACACTGGAAGCCAAAGAAGCTACATTACGACAGAGTTAAAAGAC
CGTTTGAAATTAAAGTGCGTGAGAAAAGAGAATGTAGTGATTAAGACTTT
TGGAAATTTGAATAATGCGGAAATCAAACGTTTGGAAGTTGTTCAATTCA
AAGTGAAACATCGGAAGTCTTCTAAATACGTTTTAGTTGAAGCTCTTTGT
GTTCCGGACATTTGTAGCCCGATTGCAAACCAGAAGTTGGATTGTGCAAA
GAAGTTGAATGAATTCTCTGATTTGGTGTTTGCAGATGTTTCCGAGGAGT
TTGACTTGAGTATAGGGGTATTGGTTGGTATCGAtttttattttcgcttt
tttaCTGGTAAGAGACGTGAGAGCAAGGAAGGTGTTGTGGCTTGTGAATC
TTTACTTGGTTGGATTTTGAGTGGATCTGTTGTTTTCAAAGGTTTGACTG
AAGTAACTTATAGTCATCAAATGAGAGTTGAGGTACAAACTGTTGATCCA
CTTGATGCCAAGCTCCATAAGTTTTGGCAGATAGAGGAGGCAGAGAGTGC
CGAGGATAACTCAGTGATTAACCAATTTACCAAAGACATTTACCATGATG
GTACTAGGTATGTCGCGAAACTGCCTTTCAAGCCCGACCACGAGAGTGTG
CCTGACAACTTTTCGACCTGTGTGAAACGTCTGGAATCCCTTAATTCGCG
TCTCGATCGTCTTGGTATCAATACTGACTAcgagaaaatttttattgatt
atgAGAAAGACGGAATTATCGAACGTGTGCCTGAGGCGCAGATTGCGAAA
GAGGAGGGTACCGTTCATTACATTCCCCATAGACCAGTTATCCGTGAAGA
CAAGGTCACCACTAAGATAAGGCCCGTGTTTGATGCTTCTTGTTCTGTCA
ATGGTGTATCCTTGAATGATTGCCTTTATCCTGGTCCAAATTTACTTgct
aaaatttttgacattttactaCGTTTTAGAATGAACAAGATTGGTATTTT
ATCTGATATCAAGCAAGCTTTCTTGAATATCAGCATCCATCCTGATCATA
GagattttttgagatttctcTGGAGAGACCCTCTGTCCTCTGATAGAGAA
GTCGTTGTCTATCgttttttgagagttgtttttggtttgacgtctagtcc
ttttttACTCAATGGTACGATT Coding sequence (CDS) from alignment at sc0000129_pilon:288713..292284+ >MSTRG.14993.1.p1 ID=MSTRG.14993.1.p1|Name=MSTRG.14993.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2583bp|location=Sequence derived from alignment at sc0000129_pilon:288713..292284+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGACACTGGATCGAAAACTCAAGCGGAGAGAAGGCCTTAGAGCTTTCTT
AAAGTCCACTATGGAGAATATCGAAAAGTATCTTAAAGGTGATGACATTT
CTGAGGCAAGGTTAAGATCCTTTAAGTCTATGCTAGAATCCACTTGTGCC
CAACTTTCCGACATCAATAAAGAGATTCTCCCACTTTTAGACCCTGAAAA
GATCAGTGACGATGTAGTTCAAAGCATGGGATTAATGCTTCCTGCAACTG
AGATCGATGCTTGTCTTGACATTAAGCTTTTGGAGATAGCAAAATCGAAT
GGCTCCGCTTCTGTTTCTTTGCCAACTGCATCCGTTTCTTCTGGGACAAG
TGTTTCTCGACTTCCAAAGATAGAGCTCCCTACGTTTAAAGGTGATCCGC
TCAAGTGGCAAGGGTTTTGGGATCAGTTCAAGATTTCCATCCACGAAAAT
GAGCGCATAAACGACATTGACcgctttaattttttgaaaaaatatttggc
tGGCGAAGCCTTGGATTCGATTAAAGGTTTGACTCTAAACTCTGATAATT
ACAAGGAAGCCATAGAAATATTATGCGAGAGGTATGGGAACGAGCAAGTT
TTGATTTCGTCACACATGCAATCCCTCTTGAGGATACAGAAGATAAGATC
AAAAGACAACATAAAGAGCCTTCGAACGCTTTACAACCACGTTGAAAGCT
GTGTGCGAAATTTGAAAGCCTTGAAGCTCGAAGCTAAAGGTTATGGCAGT
CTTTTGATCCCtatcttaaaagaaaaactccCTGACGAGCTAAAAATTGT
GATCTCTAGGAAGTTTGGAAGTTCCATCTGGACACTAGATTTATTGCTCA
CTTATCTCAATGAAGAACTTAGAGCTCAGGAAAATTGCACCAATTCTGGT
GGCGGAAAAGCTGAGCGAACTGATGAGAGTGATCCACTTTATAGTGCCCT
TGGTCTTTTTTCTAATACTGAGAAGAACGTCTGTGtcttttgtaaaaaga
gtcacaGCTCTGCTAAATGTCGAAAGGTCACAAATACACAGTCACGTCGG
GATATTCTAATTAGAGAAAAGAGGTGTTTTGTTTGTTTGGCTCGTGGACA
TCGTTCCAATGCTTGTAGAGATAAGTACTCATGTAATAGGTGTAACAAGA
GGCATCACATTTCTATTTGCGATGAAGGTAAACAAAGATCTGAAGCTGAT
AACATTTCTAACAATCAGATCTCGATCTTGACCGATGCAAATAGTGAGCC
TCAGTCTGAATCCAAAGCTCCTTGTAGTTGTAGTTGCAACTCTGTTCCTA
CTCCTGTTTCTCAAAATTGTGCTCAAGTTTCTTCACGTAGCGTTTTGTTG
CAGACTGCAACTAGTGAGATCTTTGGTTCCAGTTGTCACAACAGTGTGAA
AACAAGATTGTTGTTCGACACTGGAAGCCAAAGAAGCTACATTACGACAG
AGTTAAAAGACCGTTTGAAATTAAAGTGCGTGAGAAAAGAGAATGTAGTG
ATTAAGACTTTTGGAAATTTGAATAATGCGGAAATCAAACGTTTGGAAGT
TGTTCAATTCAAAGTGAAACATCGGAAGTCTTCTAAATACGTTTTAGTTG
AAGCTCTTTGTGTTCCGGACATTTGTAGCCCGATTGCAAACCAGAAGTTG
GATTGTGCAAAGAAGTTGAATGAATTCTCTGATTTGGTGTTTGCAGATGT
TTCCGAGGAGTTTGACTTGAGTATAGGGGTATTGGTTGGTATCGAttttt
attttcgcttttttaCTGGTAAGAGACGTGAGAGCAAGGAAGGTGTTGTG
GCTTGTGAATCTTTACTTGGTTGGATTTTGAGTGGATCTGTTGTTTTCAA
AGGTTTGACTGAAGTAACTTATAGTCATCAAATGAGAGTTGAGGTACAAA
CTGTTGATCCACTTGATGCCAAGCTCCATAAGTTTTGGCAGATAGAGGAG
GCAGAGAGTGCCGAGGATAACTCAGTGATTAACCAATTTACCAAAGACAT
TTACCATGATGGTACTAGGTATGTCGCGAAACTGCCTTTCAAGCCCGACC
ACGAGAGTGTGCCTGACAACTTTTCGACCTGTGTGAAACGTCTGGAATCC
CTTAATTCGCGTCTCGATCGTCTTGGTATCAATACTGACTAcgagaaaat
ttttattgattatgAGAAAGACGGAATTATCGAACGTGTGCCTGAGGCGC
AGATTGCGAAAGAGGAGGGTACCGTTCATTACATTCCCCATAGACCAGTT
ATCCGTGAAGACAAGGTCACCACTAAGATAAGGCCCGTGTTTGATGCTTC
TTGTTCTGTCAATGGTGTATCCTTGAATGATTGCCTTTATCCTGGTCCAA
ATTTACTTgctaaaatttttgacattttactaCGTTTTAGAATGAACAAG
ATTGGTATTTTATCTGATATCAAGCAAGCTTTCTTGAATATCAGCATCCA
TCCTGATCATAGagattttttgagatttctcTGGAGAGACCCTCTGTCCT
CTGATAGAGAAGTCGTTGTCTATCgttttttgagagttgtttttggtttg
acgtctagtccttttttACTCAATGGTACGATT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000129_pilon | genome | sc0000129_pilon:288713..292284 + |
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