MSTRG.14988.1.p1 (mRNA) -

Overview
NameMSTRG.14988.1.p1
Unique NameMSTRG.14988.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000129_pilon:149281..152671-

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.14988.1.p1 ID=MSTRG.14988.1.p1|Name=MSTRG.14988.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3391bp|location=Sequence derived from alignment at sc0000129_pilon:149281..152671- (Clytia hemisphaerica_ch_hm2_pilon)
AGGTACCAAAAGAAACGATCAGTTATAGAAGCTTTAAAACAAGAACGCAT
CATAATCTGCAAACGAAAACATCACGGTGAACATATCATAATGCCATGTG
AAGAATGTAGAATTTGGTTATGTTGGGATTCCCTTATCGACCACCTTCAG
TTAAAGAAACATAACATGGATCGATTAGGTGCCATTGATTTCATGATCAC
ATTAAAAAAGAAGATTTGGGGTCAAAATGCTCCTAAAGCCAGAGATTTAG
ACGATTTTGGACGGCGTCTCCCAGCTGCGAATGAACAAAGTTCGTGTAAA
GACAGCCAAAGAGCAGATATTTCCACGAATAATGCCCAGAAAGATTCTAA
TTCAGAAAAATCCATCACATACCTCCCATCATCCAAAACTAACACATCTC
TATCTACACCTTCTATCGCTAGCAAACAAAAAGTGGTGATGAAGAAAAGC
TTTATAAGCGACGCTTTAAGTTCACTCAAAAGTACTGGGTGCCCACCTAT
TAATAGTGCTTATACTACAATCAACCCTACGCTTTTGAGAGAAGCTTTAA
AGGATGATAAAGCACAATATGAGAAAGACTTTTCATTAACGAAAGATGTG
AAAAGCAATGTCGGTGAAAAACGAAAATCGATTGTTATTGACGATGATGA
AGACACTAAAGTGATTAACATCCAGCCTTCAAATAAATCAAAACGCTCTG
AGCCTTCAAAGAGTAATTCCCAAACACTCGACAATAGTCTATCTACAGAC
TACAAAATTTCAGCTCCTGCTGTTGATGCTGAATATGAGAGGGAGAAAAA
CATTAGCAATAAAGCAAGAATTGATAATAAAGCTAGTCTCCGTGTGGTTA
TAACTGATGTAAAAGAAGTTAATATGCAAAAAGTTAAGGTGGCTGCAAGT
TGCCCTGTATGTGGAAGAGAATTTAAAATGAAACAAATGAAACAAATTAG
CCATCATTTGGTAAGAAAACATGGTTTTAAGGTACGACAAGCTCTTATGG
AGGAGGTAAAGCAGACACGATTGGCTAAGTGTATGAAACAGCACGGAGGA
GAACATATTCTTCTGCCATGCGCAGTCGATCAATGCGACATGTGGTTTTG
CAGCGATATGAGTTTTGAACAACATATGAGGATGAAACATTGTATGTCTA
TGCCTGATGTTTATAAAGCGAGAGACGAGTTAGTTAAAAAACATTGGGGT
GGTAAAAAAGTACTCGTCAAAGAGATCTTATCAGAAATTAGTACCAACAA
TAAAAGTACATTAAATTCTAATGCTAAATCCAGTATGGAAGATTCAATGA
TATCTAAATCCAACACTGAAATCAGTACGCGAAGACCTACTGAAAAGTCA
ACAAATACATCCAAGTCTTCCACTTCAACCAGTACCGGTGAAGAAATAAC
TACTGAAGTTACAAGGACATCTAAATCTAACGCTGGAACGAGAGAAAGTG
CTAAAGAAAGTGCTAGCATTATATCCAAGTCGTTCGTTGGATCAGAAGCT
TTGGAAACGGAATGTGATAGAGATTATACCACTGATGTAAAAGAGAGTTT
TCAGGAGACTGCGATCGAGGAGGAAAAAGAACTAAAATCGAGCACACGGG
AAAATGCCAGTGATCAAATAAAATCAACAGAAAATGGCGACACTTTATTG
GGAATTTCATGTGAGAAAGTTTCTTTAAAAGCAAAAGGTGACGGAGATAT
CATTATGGTTGATCAGAGTCGTCAAGAAATACCGGAGCCTTCGATTAAAG
AAGAGGGAGAAACAAGTGTCACAAGTCTCTCGTGTGAAGACTCGTTTAAA
GTTACAACGCAACCTTGTCAAACGCTGGAGGTATATAAAACTATGTATTT
GTTAGAAGAGATCCTCTTTACAATGTCCCATTGATCGATATTGTTTTCTA
TTTACTACCTGGGTAGGTTTTAAAGAATATTTGTTTATATTCTTAACAAT
CAGCATCAATCCCGATCGACTTGTGATATTGATTGAAGGCTGATAAGGAA
GTAGAAAATGTAATGAGATTTTCTATTTTTATCATTGCTTTTAAATTGAT
GGATGGCTTTTGTCTCTGGGTCTTACATTCAAGAACTCATTTTCTTTACT
TAAGTAAATAAATTACCTTTTTACTCTTTCTCAGGAATTGGCTCAAGATA
TTCAAAACATCACAACAACTGCTAAACTTTTTATCAGGTAAACTTCTGCA
ATTTCCATATCGGAAGAAGATGGAGTCTTTGAATCGAATTAATGAAATTT
GATATTTTGCCGAATGTAAAATCAAACAAAGGCTTTTTTCGCTTTGCTGA
TCTTCCCCTGTTTTTGCACATGACATACACGTTTTTTTATTATAAGAACA
AACTGTATAACAACATGAGCCTTCCATGGCCTAAATATTAAGAACAAATT
AAGAACATTTTAAGGCTTCGCTGACTTGAAAACAGTTCAAAGGGCCAATA
TTTTCATTTTCATGTTTAACTTTGTCATTAAATTAAATAATCAAAAAGGT
ATTTCTTTTTCACTGAAAATCGTTTTTTCTTTCTCCAGGAAAGCACCAGA
TCTTGAAGAAAGGTTGACAATGATTTGCAAAGAAGTACTTGTGGATCTAT
CAGAACCTGTCAGGAGGAACTTTCGAAATAAAGAAACAATCAACCCTTGA
CAAAATGACAATTCTAAGTTTTTAAAGTTGACCCTTTATTGATTGGAACA
CCTATTACGTTTATTTTGTAGTATATTGGACTAAGCATCTGATTTTTCTG
TAATTTCGAATTGCATTATACTATAAGTTTTTATGCTGCTTAATTTTGTA
AAATAAGCACAGATTACTCCAAGGGGCCGTCCACATAGTACGTACGCACT
GAAATGTCGAAAATCGGATACCCCTCCCCCTGTACGCAAGCGTACGCAAA
TGGCTATACCCCCTGGTAAGTACGTACTTTTCATCCACCCCCCCCCCTCG
GTTGAAGAAAATTTCGAATTCAATTCGTTTGCTTCGGACCTTTATTTCAT
ACATTAGACTCAATGATGTTTATTAAGAAACTTTTTCTATTCCTTGGTGC
GTATAAGAAACGTAAAAATCGACAAAAAACAAGCAAAAAAGGGCTATGAA
ACACTTTTCTCTGCGTACGTACATTTTCCTTTGACCCCTCCCCTTCCCCC
GTACGCAAGCATACGCTTTTAAGAAGACTCCCTCTCCCCCTTAGTGCGTA
CGTACTATGTGGACGGCCCTCAAGTGTGTTATGTTTTGGTATGTTTCGGA
CAAACCATATCCTGTTTTTGTTTTTGAGAAAGTTGAATTTTTTATACAGT
TGACTCTCTATAATTCGATCTTCAAGGGACCAAGAATTTTCTTCGAATTA
GAGAAAGATTCGTTACAGAGAGTATTCTTTATTTCTAGCTG

Coding sequence (CDS) from alignment at sc0000129_pilon:149281..152671-

>MSTRG.14988.1.p1 ID=MSTRG.14988.1.p1|Name=MSTRG.14988.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=5985bp|location=Sequence derived from alignment at sc0000129_pilon:149281..152671- (Clytia hemisphaerica_ch_hm2_pilon)
GAAAGCACCAGATCTTGAAGAAAGGTTGACAATGATTTGCAAAGAAGTAC
TTGTGGATCTATCAGAACCTGTCAGGAGGAACTTTCGAAATAAAGAAACA
ATCAACCCTTGAGAATTGGCTCAAGATATTCAAAACATCACAACAACTGC
TAAACTTTTTATCAGAGGTACCAAAAGAAACGATCAGTTATAGAAGCTTT
AAAACAAGAACGCATCATAATCTGCAAACGAAAACATCACGGTGAACATA
TCATAATGCCATGTGAAGAATGTAGAATTTGGTTATGTTGGGATTCCCTT
ATCGACCACCTTCAGTTAAAGAAACATAACATGGATCGATTAGGTGCCAT
TGATTTCATGATCACATTAAAAAAGAAGATTTGGGGTCAAAATGCTCCTA
AAGCCAGAGATTTAGACGATTTTGGACGGCGTCTCCCAGCTGCGAATGAA
CAAAGTTCGTGTAAAGACAGCCAAAGAGCAGATATTTCCACGAATAATGC
CCAGAAAGATTCTAATTCAGAAAAATCCATCACATACCTCCCATCATCCA
AAACTAACACATCTCTATCTACACCTTCTATCGCTAGCAAACAAAAAGTG
GTGATGAAGAAAAGCTTTATAAGCGACGCTTTAAGTTCACTCAAAAGTAC
TGGGTGCCCACCTATTAATAGTGCTTATACTACAATCAACCCTACGCTTT
TGAGAGAAGCTTTAAAGGATGATAAAGCACAATATGAGAAAGACTTTTCA
TTAACGAAAGATGTGAAAAGCAATGTCGGTGAAAAACGAAAATCGATTGT
TATTGACGATGATGAAGACACTAAAGTGATTAACATCCAGCCTTCAAATA
AATCAAAACGCTCTGAGCCTTCAAAGAGTAATTCCCAAACACTCGACAAT
AGTCTATCTACAGACTACAAAATTTCAGCTCCTGCTGTTGATGCTGAATA
TGAGAGGGAGAAAAACATTAGCAATAAAGCAAGAATTGATAATAAAGCTA
GTCTCCGTGTGGTTATAACTGATGTAAAAGAAGTTAATATGCAAAAAGTT
AAGGTGGCTGCAAGTTGCCCTGTATGTGGAAGAGAATTTAAAATGAAACA
AATGAAACAAATTAGCCATCATTTGGTAAGAAAACATGGTTTTAAGGTAC
GACAAGCTCTTATGGAGGAGGTAAAGCAGACACGATTGGCTAAGTGTATG
AAACAGCACGGAGGAGAACATATTCTTCTGCCATGCGCAGTCGATCAATG
CGACATGTGGTTTTGCAGCGATATGAGTTTTGAACAACATATGAGGATGA
AACATTGTATGTCTATGCCTGATGTTTATAAAGCGAGAGACGAGTTAGTT
AAAAAACATTGGGGTGGTAAAAAAGTACTCGTCAAAGAGATCTTATCAGA
AATTAGTACCAACAATAAAAGTACATTAAATTCTAATGCTAAATCCAGTA
TGGAAGATTCAATGATATCTAAATCCAACACTGAAATCAGTACGCGAAGA
CCTACTGAAAAGTCAACAAATACATCCAAGTCTTCCACTTCAACCAGTAC
CGGTGAAGAAATAACTACTGAAGTTACAAGGACATCTAAATCTAACGCTG
GAACGAGAGAAAGTGCTAAAGAAAGTGCTAGCATTATATCCAAGTCGTTC
GTTGGATCAGAAGCTTTGGAAACGGAATGTGATAGAGATTATACCACTGA
TGTAAAAGAGAGTTTTCAGGAGACTGCGATCGAGGAGGAAAAAGAACTAA
AATCGAGCACACGGGAAAATGCCAGTGATCAAATAAAATCAACAGAAAAT
GGCGACACTTTATTGGGAATTTCATGTGAGAAAGTTTCTTTAAAAGCAAA
AGGTGACGGAGATATCATTATGGTTGATCAGAGTCGTCAAGAAATACCGG
AGCCTTCGATTAAAGAAGAGGGAGAAACAAGTGTCACAAGTCTCTCGTGT
GAAGACTCGTTTAAAGTTACAACGCAACCTTGTCAAACGCTGGAGGAAAG
CACCAGATCTTGAAGAAAGGTTGACAATGATTTGCAAAGAAGTACTTGTG
GATCTATCAGAACCTGTCAGGAGGAACTTTCGAAATAAAGAAACAATCAA
CCCTTGAGAATTGGCTCAAGATATTCAAAACATCACAACAACTGCTAAAC
TTTTTATCAGAGGTACCAAAAGAAACGATCAGTTATAGAAGCTTTAAAAC
AAGAACGCATCATAATCTGCAAACGAAAACATCACGGTGAACATATCATA
ATGCCATGTGAAGAATGTAGAATTTGGTTATGTTGGGATTCCCTTATCGA
CCACCTTCAGTTAAAGAAACATAACATGGATCGATTAGGTGCCATTGATT
TCATGATCACATTAAAAAAGAAGATTTGGGGTCAAAATGCTCCTAAAGCC
AGAGATTTAGACGATTTTGGACGGCGTCTCCCAGCTGCGAATGAACAAAG
TTCGTGTAAAGACAGCCAAAGAGCAGATATTTCCACGAATAATGCCCAGA
AAGATTCTAATTCAGAAAAATCCATCACATACCTCCCATCATCCAAAACT
AACACATCTCTATCTACACCTTCTATCGCTAGCAAACAAAAAGTGGTGAT
GAAGAAAAGCTTTATAAGCGACGCTTTAAGTTCACTCAAAAGTACTGGGT
GCCCACCTATTAATAGTGCTTATACTACAATCAACCCTACGCTTTTGAGA
GAAGCTTTAAAGGATGATAAAGCACAATATGAGAAAGACTTTTCATTAAC
GAAAGATGTGAAAAGCAATGTCGGTGAAAAACGAAAATCGATTGTTATTG
ACGATGATGAAGACACTAAAGTGATTAACATCCAGCCTTCAAATAAATCA
AAACGCTCTGAGCCTTCAAAGAGTAATTCCCAAACACTCGACAATAGTCT
ATCTACAGACTACAAAATTTCAGCTCCTGCTGTTGATGCTGAATATGAGA
GGGAGAAAAACATTAGCAATAAAGCAAGAATTGATAATAAAGCTAGTCTC
CGTGTGGTTATAACTGATGTAAAAGAAGTTAATATGCAAAAAGTTAAGGT
GGCTGCAAGTTGCCCTGTATGTGGAAGAGAATTTAAAATGAAACAAATGA
AACAAATTAGCCATCATTTGGTAAGAAAACATGGTTTTAAGGTACGACAA
GCTCTTATGGAGGAGGTAAAGCAGACACGATTGGCTAAGTGTATGAAACA
GCACGGAGGAGAACATATTCTTCTGCCATGCGCAGTCGATCAATGCGACA
TGTGGTTTTGCAGCGATATGAGTTTTGAACAACATATGAGGATGAAACAT
TGTATGTCTATGCCTGATGTTTATAAAGCGAGAGACGAGTTAGTTAAAAA
ACATTGGGGTGGTAAAAAAGTACTCGTCAAAGAGATCTTATCAGAAATTA
GTACCAACAATAAAAGTACATTAAATTCTAATGCTAAATCCAGTATGGAA
GATTCAATGATATCTAAATCCAACACTGAAATCAGTACGCGAAGACCTAC
TGAAAAGTCAACAAATACATCCAAGTCTTCCACTTCAACCAGTACCGGTG
AAGAAATAACTACTGAAGTTACAAGGACATCTAAATCTAACGCTGGAACG
AGAGAAAGTGCTAAAGAAAGTGCTAGCATTATATCCAAGTCGTTCGTTGG
ATCAGAAGCTTTGGAAACGGAATGTGATAGAGATTATACCACTGATGTAA
AAGAGAGTTTTCAGGAGACTGCGATCGAGGAGGAAAAAGAACTAAAATCG
AGCACACGGGAAAATGCCAGTGATCAAATAAAATCAACAGAAAATGGCGA
CACTTTATTGGGAATTTCATGTGAGAAAGTTTCTTTAAAAGCAAAAGGTG
ACGGAGATATCATTATGGTTGATCAGAGTCGTCAAGAAATACCGGAGCCT
TCGATTAAAGAAGAGGGAGAAACAAGTGTCACAAGTCTCTCGTGTGAAGA
CTCGTTTAAAGTTACAACGCAACCTTGTCAAACGCTGGAGGAAAGCACCA
GATCTTGAAGAAAGGTTGACAATGATTTGCAAAGAAGTACTTGTGGATCT
ATCAGAACCTGTCAGGAGGAACTTTCGAAATAAAGAAACAATCAACCCTT
GAGAATTGGCTCAAGATATTCAAAACATCACAACAACTGCTAAACTTTTT
ATCAGAGGTACCAAAAGAAACGATCAGTTATAGAAGCTTTAAAACAAGAA
CGCATCATAATCTGCAAACGAAAACATCACGGTGAACATATCATAATGCC
ATGTGAAGAATGTAGAATTTGGTTATGTTGGGATTCCCTTATCGACCACC
TTCAGTTAAAGAAACATAACATGGATCGATTAGGTGCCATTGATTTCATG
ATCACATTAAAAAAGAAGATTTGGGGTCAAAATGCTCCTAAAGCCAGAGA
TTTAGACGATTTTGGACGGCGTCTCCCAGCTGCGAATGAACAAAGTTCGT
GTAAAGACAGCCAAAGAGCAGATATTTCCACGAATAATGCCCAGAAAGAT
TCTAATTCAGAAAAATCCATCACATACCTCCCATCATCCAAAACTAACAC
ATCTCTATCTACACCTTCTATCGCTAGCAAACAAAAAGTGGTGATGAAGA
AAAGCTTTATAAGCGACGCTTTAAGTTCACTCAAAAGTACTGGGTGCCCA
CCTATTAATAGTGCTTATACTACAATCAACCCTACGCTTTTGAGAGAAGC
TTTAAAGGATGATAAAGCACAATATGAGAAAGACTTTTCATTAACGAAAG
ATGTGAAAAGCAATGTCGGTGAAAAACGAAAATCGATTGTTATTGACGAT
GATGAAGACACTAAAGTGATTAACATCCAGCCTTCAAATAAATCAAAACG
CTCTGAGCCTTCAAAGAGTAATTCCCAAACACTCGACAATAGTCTATCTA
CAGACTACAAAATTTCAGCTCCTGCTGTTGATGCTGAATATGAGAGGGAG
AAAAACATTAGCAATAAAGCAAGAATTGATAATAAAGCTAGTCTCCGTGT
GGTTATAACTGATGTAAAAGAAGTTAATATGCAAAAAGTTAAGGTGGCTG
CAAGTTGCCCTGTATGTGGAAGAGAATTTAAAATGAAACAAATGAAACAA
ATTAGCCATCATTTGGTAAGAAAACATGGTTTTAAGGTACGACAAGCTCT
TATGGAGGAGGTAAAGCAGACACGATTGGCTAAGTGTATGAAACAGCACG
GAGGAGAACATATTCTTCTGCCATGCGCAGTCGATCAATGCGACATGTGG
TTTTGCAGCGATATGAGTTTTGAACAACATATGAGGATGAAACATTGTAT
GTCTATGCCTGATGTTTATAAAGCGAGAGACGAGTTAGTTAAAAAACATT
GGGGTGGTAAAAAAGTACTCGTCAAAGAGATCTTATCAGAAATTAGTACC
AACAATAAAAGTACATTAAATTCTAATGCTAAATCCAGTATGGAAGATTC
AATGATATCTAAATCCAACACTGAAATCAGTACGCGAAGACCTACTGAAA
AGTCAACAAATACATCCAAGTCTTCCACTTCAACCAGTACCGGTGAAGAA
ATAACTACTGAAGTTACAAGGACATCTAAATCTAACGCTGGAACGAGAGA
AAGTGCTAAAGAAAGTGCTAGCATTATATCCAAGTCGTTCGTTGGATCAG
AAGCTTTGGAAACGGAATGTGATAGAGATTATACCACTGATGTAAAAGAG
AGTTTTCAGGAGACTGCGATCGAGGAGGAAAAAGAACTAAAATCGAGCAC
ACGGGAAAATGCCAGTGATCAAATAAAATCAACAGAAAATGGCGACACTT
TATTGGGAATTTCATGTGAGAAAGTTTCTTTAAAAGCAAAAGGTGACGGA
GATATCATTATGGTTGATCAGAGTCGTCAAGAAATACCGGAGCCTTCGAT
TAAAGAAGAGGGAGAAACAAGTGTCACAAGTCTCTCGTGTGAAGACTCGT
TTAAAGTTACAACGCAACCTTGTCAAACGCTGGAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.14988MSTRG.14988Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.14988.1.p1.exon3MSTRG.14988.1.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14988.1.p1.exon2MSTRG.14988.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14988.1.p1.exon1MSTRG.14988.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.14988.1.p1MSTRG.14988.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000129_pilongenomesc0000129_pilon:149281..152671 -