|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000007_pilon:924703..929100+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.1496.6.p1 ID=MSTRG.1496.6.p1|Name=MSTRG.1496.6.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4398bp|location=Sequence derived from alignment at sc0000007_pilon:924703..929100+ (Clytia hemisphaerica_ch_hm2_pilon)
gttccttataaaaaaaacgtgtacaattcCTCTTTCTTAACTTTCAGATT
TCTGCAAAGACAAGCCCATCTTCAATGAACACCAAGTTGAGTGCAATAAA
TATATCATATGCGGCGCCCTCGTGCCGGTTATCCTCAAGTGCCCAGAGCC
ACTAGCATGGGACAGCAGACGAAACATTTGTAATTGGAGACGCTACACCA
AATGCAAAACAGGTAAGGGTATCTTAAATGTATTTTGCTGAGGAAAACGC
TgctactttataagaactatcGCTTGATGGAGAATTGAACTTATTTAGTT
TTCTTTTGCAAATAGTTtcaaaagaaatggaaaatcatACTTTTATCATA
TTAGTTAAACCAAATTTGACCTCTCTTTTAGAACCAACAACGACAGCTAC
CAATACTAACCAAAAGTGACCAAACACACTATACCTTCTAACACCAGAGG
TTGGTACCATAAAACTGAGCGTGTAAAACTTTAACCGTTTTTTAAATGGT
ATTGAGTAATAGCTGAACACTATTCTTCTACCGGTAGTAAAAAAGTTCAA
CCTTCTCCTATTTCACAGTGCTTGCTGAATTGAAGTGTGATCATACAAAA
TGTACCTTACCAAATTGTCGTTGTCAAAGCCCACAGGTTCCTGGTGAATT
GCCAACTTCACAGGTCCCACAAATGGTTCTCATCTCATTCGATGGGCCTG
TCAATCAAGCAAATCATGAATTTTTCACTGAAACTTTTGATGCTCGGTTG
AATCCAAATCGATGTCCAGTAAAAGTGTCCTTCTTCGTATCGGATCATGG
AAATGATTATAAATTGACTCAGAAGCTTCATCGGAAAGGTTGGTACATTG
TCATCtttgaattctcaaaaaaaaacctTGGCTTATatatagcgagcacc
tcactaaaaaccgggatttttcatctcgtttttaatgagttccactttga
cgatttttgaaaaatagaagcttttcaagtgttttgacgcaaattcgatt
ttttcctcctgcaaaggcttcaaaagtttaaagtgacgtcaaaaaaccga
atgtttggagcccgaaaacctgggcttaaaacattcgaaaatgtcgcaaa
gtggaatggacgttaattgcgtagaaaaaacgcgggtgacgtataggtct
agtataggctatggCTTATACAGATGTGGAAAAGTAAAATTTGTCATGAT
TGTCCGACAATCTCAATATGACTTGATTCAGGATTGAAATATTTTAGTGG
TCGCAATTTCAGCTTTATCAGTATTTTAGTCCTTATTCCTAATGAGTTCT
GCTTCAGAAAGGCAGAACATCGgagaatttcatgaaaaaggactTCTGTG
TAATGTGgtgaaatttctttcttttttttaaagtagtttttttcttttat
ataaagGTCATGAAATCGCTGTCCGATCGTTAGCACCTGACCAAACACAC
GGATACTGGAAAAACATCAGCTATCTTGATCTCGTCAAAGATGTGATTGG
TTTAAAGCTCAAACTCACATTGAATGGAATCAATCACGTGACCGGTTATC
GAGCACCTTTCCACCAATCAGCTGGTGACACAACTTTCGCGGCTCTACAA
GAGTATGGGTTCGAGTATGATTCGTCTCTACCAATCAGATCGAAGGAGAA
ACAATGGTGGCCGTTCACGATGGATTCTGGGATACATTCGTTTGATTGTT
TGTCCCCTCCCTGTCCGAAATGTAAGTAAGCCCATTCATACTCAATACAA
GTTGAATAGTTGTAAGAGCTATGAGAACTTTACACCACGGTCATTGTATG
GGCTAAACATCAAGCGGCGATACTTTTTacaaaaagcagaaaaaattaGC
CAAACCAAGAAATCTCTCTCATTTGGAAATTGATTATATTATATTTCAGT
TATATCTTAAACAAAAGATAATTCGCTCTTTCAGACTCGTACCCTGGATT
ATGGGAGTTACCATTGACGTCATTGAGTGACGGAGAAGAATCTTGCAGGA
CCTATCAATCGTGCACGAATTACGTTCAAACATCAGATGGATTCTACGAt
ttcttgatgaaaaatttcttcCGATTGTACCAAGGAAATAAGGCACCTCT
TACACTGGCAGGAACAGCTTCATGGTTGATGTCCCCAAGCCATCCTTACA
GAAGACAAGGTATTAGGACTtttctattgtcattttacagtGTCTGTGTT
TGATAAATGGTTACGATTCTACGGGTGAGTGTATCATTGGATTATTCAAT
TATGCAGGTTCATATTGCTGGGCTATCAATCAAGTCTCAGATTATCAATT
TATACTGGGGAACTGCGATGCTTTTATTTCCCTATTTTCATTGTCTGCCG
AATTCCGTTCCATACAATACTTCGGTCCTTTATCCGCTACCTATATCTCT
ATGTACACGCATGTGTAAATGTACTGTTATAAAGTATAGTTTTAAGGATG
AATAGAGGGCATGAATTTCAAAGTTAACAGCGAGAAAGAAGGGATGGAAC
TTTTACCGTCAGAGAATAAAAAGACATAGCCATAGCCTACCATAGGACGT
TCTCGTGTCTTGTGAGAACTTTAAATTGTTTGAAGAAACACGCTTGTCCT
GTTCAGAAGTTAGAAGAGGAAAAGTCAGACACCAAATAGTCACAAAGATT
ATTCTGAAATAACTAGAAAAAGTCAGAGCGCTAATGCAAGATGATTGAAA
CGATTATTGAGTAAGAGAAGCAAAGAAGGAAAGTTTGGAGGtatgtttct
tttattgataGAATTTAGAGTTGTAATCAATTGACAGTACTAattggtca
gccccggtgacccttcaaatcggtTCCGCTGtttttttCCAGCCGAGTCG
CCATCATCATGGTGGGATTTGGATAATCAGCTTCAATTCCGATTTTTCCC
GATTCGATTTTTGGACAACCGGGTTATAATGATATGTGTGCGTCGGGATG
CGTTGTAATTTCATAATGATTTCATATAGCGCGTCGGCGTTATTGCATCA
GCCGTTATCTCCCTTATATTGCGCCACCTCTTTCGAAGCGTACTGTGGAC
AATTTTCTGAAATGTTTGAGTAGATTCGCAGTAGTAGCTGGCTAAGTTGT
TTCACAAACGTGATGGTTGAATGGCTGGAAGAAGAGTTCAAGCAGTCTCA
ACTTTCATCATATCTTGAGGTTGAGGTGAGAGTTTTTGATTTATATGAAT
CAAAGTTTATTGATTCCTtgtcaaagttattttcaaaaaagatagcaTAT
TCAtagtttatattttcttttttgcataTTATAAATCTctattataaatc
aaaatcctgcaaaatttactaaaaatgaACACTCAAATCTCTCTGTTGAT
TGACAAAAGAATAATGGACAAAATGTATATATGAATGAATTTGgtgttga
aatgaaaatgttggtAATTCGTTGAttgtttattgttgttttaCTATCTG
GTGTTACATGTTTATAGTATCGAAGAAGTCCATGGCTTTGCATCGTTTGA
GCTTGGTATTACCATCGCCTTCCTGTTTTTGTTGTTGGTTCGTTTCTTCA
CACCTGAATACTGCACTGAAAGAGTTCATAAAAGTGATAGGTAAGCTAAA
GGTCTCTTTTTGATCCATCAAAATTTGCTAACGCAGACACTTTAACGTGT
GTTTCTAGGTATATCTTAGAAAGCAATCATTTTATAGTCCttccattttc
atttgaatAATGTCTTTTTATTCGTCCAGCCATCTCTCAAAGAACGTTAA
AAATCTATGATAGTCTTTTGTCTCAATGAAAGAATAAAAGGGATTTGTTA
GCGCTAGTTTGCAAGCGTTCTGTTTCATTACTTTAACAtacaaaatattt
gataaaaagtaTACTGGTATAGGACTATACCTTAAGCAATTAATCATGAA
TGATCTAAGTTTTAAAGAGTGAAGTGATTTTGTTcatgttgttattatta
tttacCTGTGTATGGGACTTAAATATCTTCATTGTTTTGTTGTAGATATG
CTATGCCGGGATCAATCAATAACCAAATAAAGACCCTGtcaacgcaccgg
acttaacgaacacggGACATGCGAAAGTCcagtgtaaaatgagaattttt
ttaccatcggacaatctctacaccggacttaaggaagtcggatgtctggt
gtcggagaaggatatttttttccaccggacaatcaaaacaccggaaaCAC
TAATTCAATGTCTTGTTATTGGAATTATTGCTGTTGGAATAACATTGGTA
TTGGACAATAATTAAAGACTTTATTTCAACTAAAGAGTATTACATATTTC
AAATGTATTGCAAagaagtactctcgggtacctaatagccgggggggggg
ttggaataagcaggggggttggaaaaaatctcaaaatttaataagcgg Coding sequence (CDS) from alignment at sc0000007_pilon:924703..929100+ >MSTRG.1496.6.p1 ID=MSTRG.1496.6.p1|Name=MSTRG.1496.6.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2250bp|location=Sequence derived from alignment at sc0000007_pilon:924703..929100+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTTCTCATCTCATTCGATGGGCCTGTCAATCAAGCAAATCATGAATT
TTTCACTGAAACTTTTGATGCTCGGTTGAATCCAAATCGATGTCCAGTAA
AAGTGTCCTTCTTCGTATCGGATCATGGAAATGATTATAAATTGACTCAG
AAGCTTCATCGGAAAGGTCATGAAATCGCTGTCCGATCGTTAGCACCTGA
CCAAACACACGGATACTGGAAAAACATCAGCTATCTTGATCTCGTCAAAG
ATGTGATTGGTTTAAAGCTCAAACTCACATTGAATGGAATCAATCACGTG
ACCGGTTATCGAGCACCTTTCCACCAATCAGCTGGTGACACAACTTTCGC
GGCTCTACAAGAGTATGGGTTCGAGTATGATTCGTCTCTACCAATCAGAT
CGAAGGAGAAACAATGGTGGCCGTTCACGATGGATTCTGGGATACATTCG
TTTGATTGTTTGTCCCCTCCCTGTCCGAAATACTCGTACCCTGGATTATG
GGAGTTACCATTGACGTCATTGAGTGACGGAGAAGAATCTTGCAGGACCT
ATCAATCGTGCACGAATTACGTTCAAACATCAGATGGATTCTACGAtttc
ttgatgaaaaatttcttcCGATTGTACCAAGGAAATAAGGCACCTCTTAC
ACTGGCAGGAACAGCTTCATGGTTGATGTCCCCAAGCCATCCTTACAGAA
GACAAGGTATTAGGACTtttctattgtcattttacagtGTCTGTGTTTGA
ATGGTTCTCATCTCATTCGATGGGCCTGTCAATCAAGCAAATCATGAATT
TTTCACTGAAACTTTTGATGCTCGGTTGAATCCAAATCGATGTCCAGTAA
AAGTGTCCTTCTTCGTATCGGATCATGGAAATGATTATAAATTGACTCAG
AAGCTTCATCGGAAAGGTCATGAAATCGCTGTCCGATCGTTAGCACCTGA
CCAAACACACGGATACTGGAAAAACATCAGCTATCTTGATCTCGTCAAAG
ATGTGATTGGTTTAAAGCTCAAACTCACATTGAATGGAATCAATCACGTG
ACCGGTTATCGAGCACCTTTCCACCAATCAGCTGGTGACACAACTTTCGC
GGCTCTACAAGAGTATGGGTTCGAGTATGATTCGTCTCTACCAATCAGAT
CGAAGGAGAAACAATGGTGGCCGTTCACGATGGATTCTGGGATACATTCG
TTTGATTGTTTGTCCCCTCCCTGTCCGAAATACTCGTACCCTGGATTATG
GGAGTTACCATTGACGTCATTGAGTGACGGAGAAGAATCTTGCAGGACCT
ATCAATCGTGCACGAATTACGTTCAAACATCAGATGGATTCTACGAtttc
ttgatgaaaaatttcttcCGATTGTACCAAGGAAATAAGGCACCTCTTAC
ACTGGCAGGAACAGCTTCATGGTTGATGTCCCCAAGCCATCCTTACAGAA
GACAAGGTATTAGGACTtttctattgtcattttacagtGTCTGTGTTTGA
ATGGTTCTCATCTCATTCGATGGGCCTGTCAATCAAGCAAATCATGAATT
TTTCACTGAAACTTTTGATGCTCGGTTGAATCCAAATCGATGTCCAGTAA
AAGTGTCCTTCTTCGTATCGGATCATGGAAATGATTATAAATTGACTCAG
AAGCTTCATCGGAAAGGTCATGAAATCGCTGTCCGATCGTTAGCACCTGA
CCAAACACACGGATACTGGAAAAACATCAGCTATCTTGATCTCGTCAAAG
ATGTGATTGGTTTAAAGCTCAAACTCACATTGAATGGAATCAATCACGTG
ACCGGTTATCGAGCACCTTTCCACCAATCAGCTGGTGACACAACTTTCGC
GGCTCTACAAGAGTATGGGTTCGAGTATGATTCGTCTCTACCAATCAGAT
CGAAGGAGAAACAATGGTGGCCGTTCACGATGGATTCTGGGATACATTCG
TTTGATTGTTTGTCCCCTCCCTGTCCGAAATACTCGTACCCTGGATTATG
GGAGTTACCATTGACGTCATTGAGTGACGGAGAAGAATCTTGCAGGACCT
ATCAATCGTGCACGAATTACGTTCAAACATCAGATGGATTCTACGAtttc
ttgatgaaaaatttcttcCGATTGTACCAAGGAAATAAGGCACCTCTTAC
ACTGGCAGGAACAGCTTCATGGTTGATGTCCCCAAGCCATCCTTACAGAA
GACAAGGTATTAGGACTtttctattgtcattttacagtGTCTGTGTTTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000007_pilon | genome | sc0000007_pilon:924703..929100 + |
|
