|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000007_pilon:924019..929100+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.1496.5.p2 ID=MSTRG.1496.5.p2|Name=MSTRG.1496.5.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5082bp|location=Sequence derived from alignment at sc0000007_pilon:924019..929100+ (Clytia hemisphaerica_ch_hm2_pilon)
GTCTCACAGAGAGGGGCACAAGGCGCAAACTTCTAAGAAATATGCGCGCT
CAACTTCTACTTAGTGTTTTTTGGGTGTTTGTGAATTTTCATTGTGTATC
TATGAATGAGTTTGAACTGCCTGAAGGTAAGCGGCTCTTTGGAATGGTAA
ATGGTTTCGCcttattgattttttcctttgttcCTCGTTTCATATAAGct
agtttatgtatgtgtgtttttcagcgacggagaggGTCAGCTTCTGATTT
TTCTAGAACCtgattgactgaggacgacCGTAAATCAACACTTTTTCCGT
CCTCGATTTCGCGGGTCAAACTGAGAGTTATTCAAAATTGCTTCACTCAC
TCTGCTACCCTCAAAAGATTCATTCATACTGCACTATCATAATAAGTTCA
ATAGCAAAATAagtaaatacacgtttttttttataaggaacacgtttata
aggaacgcaaggctgaaaatggttcaaaaaataaggaattgttaaggaac
tgctcaggctgagaataagtggatttgaaaataatgtaccttattgggac
taatttgaccaaattttgatctttcaaggggcaaaaagttcaaaatttgc
tatgtagtaaggaactcgataaggaactttgagactgaaattctctgtaa
aaataaggaactccaggctcagagcaaagttaaggttccttataaaaaaa
acgtgtacaattcCTCTTTCTTAACTTTCAGATTTCTGCAAAGACAAGCC
CATCTTCAATGAACACCAAGTTGAGTGCAATAAATATATCATATGCGGCG
CCCTCGTGCCGGTTATCCTCAAGTGCCCAGAGCCACTAGCATGGGACAGC
AGACGAAACATTTGTAATTGGAGACGCTACACCAAATGCAAAACAGGTAA
GGGTATCTTAAATGTATTTTGCTGAGGAAAACGCTgctactttataagaa
ctatcGCTTGATGGAGAATTGAACTTATTTAGTTTTCTTTTGCAAATAGT
TtcaaaagaaatggaaaatcatACTTTTATCATATTAGTTAAACCAAATT
TGACCTCTCTTTTAGAACCAACAACGACAGCTACCAATACTAACCAAAAG
TGACCAAACACACTATACCTTCTAACACCAGAGGTTGGTACCATAAAACT
GAGCGTGTAAAACTTTAACCGTTTTTTAAATGGTATTGAGTAATAGCTGA
ACACTATTCTTCTACCGGTAGTAAAAAAGTTCAACCTTCTCCTATTTCAC
AGTGCTTGCTGAATTGAAGTGTGATCATACAAAATGTACCTTACCAAATT
GTCGTTGTCAAAGCCCACAGGTTCCTGGTGAATTGCCAACTTCACAGGTC
CCACAAATGGTTCTCATCTCATTCGATGGGCCTGTCAATCAAGCAAATCA
TGAATTTTTCACTGAAACTTTTGATGCTCGGTTGAATCCAAATCGATGTC
CAGTAAAAGTGTCCTTCTTCGTATCGGATCATGGAAATGATTATAAATTG
ACTCAGAAGCTTCATCGGAAAGGTTGGTACATTGTCATCtttgaattctc
aaaaaaaaacctTGGCTTATatatagcgagcacctcactaaaaaccggga
tttttcatctcgtttttaatgagttccactttgacgatttttgaaaaata
gaagcttttcaagtgttttgacgcaaattcgattttttcctcctgcaaag
gcttcaaaagtttaaagtgacgtcaaaaaaccgaatgtttggagcccgaa
aacctgggcttaaaacattcgaaaatgtcgcaaagtggaatggacgttaa
ttgcgtagaaaaaacgcgggtgacgtataggtctagtataggctatggCT
TATACAGATGTGGAAAAGTAAAATTTGTCATGATTGTCCGACAATCTCAA
TATGACTTGATTCAGGATTGAAATATTTTAGTGGTCGCAATTTCAGCTTT
ATCAGTATTTTAGTCCTTATTCCTAATGAGTTCTGCTTCAGAAAGGCAGA
ACATCGgagaatttcatgaaaaaggactTCTGTGTAATGTGgtgaaattt
ctttcttttttttaaagtagtttttttcttttatataaagGTCATGAAAT
CGCTGTCCGATCGTTAGCACCTGACCAAACACACGGATACTGGAAAAACA
TCAGCTATCTTGATCTCGTCAAAGATGTGATTGGTTTAAAGCTCAAACTC
ACATTGAATGGAATCAATCACGTGACCGGTTATCGAGCACCTTTCCACCA
ATCAGCTGGTGACACAACTTTCGCGGCTCTACAAGAGTATGGGTTCGAGT
ATGATTCGTCTCTACCAATCAGATCGAAGGAGAAACAATGGTGGCCGTTC
ACGATGGATTCTGGGATACATTCGTTTGATTGTTTGTCCCCTCCCTGTCC
GAAATGTAAGTAAGCCCATTCATACTCAATACAAGTTGAATAGTTGTAAG
AGCTATGAGAACTTTACACCACGGTCATTGTATGGGCTAAACATCAAGCG
GCGATACTTTTTacaaaaagcagaaaaaattaGCCAAACCAAGAAATCTC
TCTCATTTGGAAATTGATTATATTATATTTCAGTTATATCTTAAACAAAA
GATAATTCGCTCTTTCAGACTCGTACCCTGGATTATGGGAGTTACCATTG
ACGTCATTGAGTGACGGAGAAGAATCTTGCAGGACCTATCAATCGTGCAC
GAATTACGTTCAAACATCAGATGGATTCTACGAtttcttgatgaaaaatt
tcttcCGATTGTACCAAGGAAATAAGGCACCTCTTACACTGGCAGGAACA
GCTTCATGGTTGATGTCCCCAAGCCATCCTTACAGAAGACAAGGTATTAG
GACTtttctattgtcattttacagtGTCTGTGTTTGATAAATGGTTACGA
TTCTACGGGTGAGTGTATCATTGGATTATTCAATTATGCAGGTTCATATT
GCTGGGCTATCAATCAAGTCTCAGATTATCAATTTATACTGGGGAACTGC
GATGCTTTTATTTCCCTATTTTCATTGTCTGCCGAATTCCGTTCCATACA
ATACTTCGGTCCTTTATCCGCTACCTATATCTCTATGTACACGCATGTGT
AAATGTACTGTTATAAAGTATAGTTTTAAGGATGAATAGAGGGCATGAAT
TTCAAAGTTAACAGCGAGAAAGAAGGGATGGAACTTTTACCGTCAGAGAA
TAAAAAGACATAGCCATAGCCTACCATAGGACGTTCTCGTGTCTTGTGAG
AACTTTAAATTGTTTGAAGAAACACGCTTGTCCTGTTCAGAAGTTAGAAG
AGGAAAAGTCAGACACCAAATAGTCACAAAGATTATTCTGAAATAACTAG
AAAAAGTCAGAGCGCTAATGCAAGATGATTGAAACGATTATTGAGTAAGA
GAAGCAAAGAAGGAAAGTTTGGAGGtatgtttcttttattgataGAATTT
AGAGTTGTAATCAATTGACAGTACTAattggtcagccccggtgacccttc
aaatcggtTCCGCTGtttttttCCAGCCGAGTCGCCATCATCATGGTGGG
ATTTGGATAATCAGCTTCAATTCCGATTTTTCCCGATTCGATTTTTGGAC
AACCGGGTTATAATGATATGTGTGCGTCGGGATGCGTTGTAATTTCATAA
TGATTTCATATAGCGCGTCGGCGTTATTGCATCAGCCGTTATCTCCCTTA
TATTGCGCCACCTCTTTCGAAGCGTACTGTGGACAATTTTCTGAAATGTT
TGAGTAGATTCGCAGTAGTAGCTGGCTAAGTTGTTTCACAAACGTGATGG
TTGAATGGCTGGAAGAAGAGTTCAAGCAGTCTCAACTTTCATCATATCTT
GAGGTTGAGGTGAGAGTTTTTGATTTATATGAATCAAAGTTTATTGATTC
CTtgtcaaagttattttcaaaaaagatagcaTATTCAtagtttatatttt
cttttttgcataTTATAAATCTctattataaatcaaaatcctgcaaaatt
tactaaaaatgaACACTCAAATCTCTCTGTTGATTGACAAAAGAATAATG
GACAAAATGTATATATGAATGAATTTGgtgttgaaatgaaaatgttggtA
ATTCGTTGAttgtttattgttgttttaCTATCTGGTGTTACATGTTTATA
GTATCGAAGAAGTCCATGGCTTTGCATCGTTTGAGCTTGGTATTACCATC
GCCTTCCTGTTTTTGTTGTTGGTTCGTTTCTTCACACCTGAATACTGCAC
TGAAAGAGTTCATAAAAGTGATAGGTAAGCTAAAGGTCTCTTTTTGATCC
ATCAAAATTTGCTAACGCAGACACTTTAACGTGTGTTTCTAGGTATATCT
TAGAAAGCAATCATTTTATAGTCCttccattttcatttgaatAATGTCTT
TTTATTCGTCCAGCCATCTCTCAAAGAACGTTAAAAATCTATGATAGTCT
TTTGTCTCAATGAAAGAATAAAAGGGATTTGTTAGCGCTAGTTTGCAAGC
GTTCTGTTTCATTACTTTAACAtacaaaatatttgataaaaagtaTACTG
GTATAGGACTATACCTTAAGCAATTAATCATGAATGATCTAAGTTTTAAA
GAGTGAAGTGATTTTGTTcatgttgttattattatttacCTGTGTATGGG
ACTTAAATATCTTCATTGTTTTGTTGTAGATATGCTATGCCGGGATCAAT
CAATAACCAAATAAAGACCCTGtcaacgcaccggacttaacgaacacggG
ACATGCGAAAGTCcagtgtaaaatgagaatttttttaccatcggacaatc
tctacaccggacttaaggaagtcggatgtctggtgtcggagaaggatatt
tttttccaccggacaatcaaaacaccggaaaCACTAATTCAATGTCTTGT
TATTGGAATTATTGCTGTTGGAATAACATTGGTATTGGACAATAATTAAA
GACTTTATTTCAACTAAAGAGTATTACATATTTCAAATGTATTGCAAaga
agtactctcgggtacctaatagccggggggggggttggaataagcagggg
ggttggaaaaaatctcaaaatttaataagcgg Coding sequence (CDS) from alignment at sc0000007_pilon:924019..929100+ >MSTRG.1496.5.p2 ID=MSTRG.1496.5.p2|Name=MSTRG.1496.5.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=864bp|location=Sequence derived from alignment at sc0000007_pilon:924019..929100+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCGCGCTCAACTTCTACTTAGTGTTTTTTGGGTGTTTGTGAATTTTCA
TTGTGTATCTATGAATGAGTTTGAACTGCCTGAAGATTTCTGCAAAGACA
AGCCCATCTTCAATGAACACCAAGTTGAGTGCAATAAATATATCATATGC
GGCGCCCTCGTGCCGGTTATCCTCAAGTGCCCAGAGCCACTAGCATGGGA
CAGCAGACGAAACATTTGTAATTGGAGACGCTACACCAAATGCAAAACAG
AACCAACAACGACAGCTACCAATACTAACCAAAAGTGAATGCGCGCTCAA
CTTCTACTTAGTGTTTTTTGGGTGTTTGTGAATTTTCATTGTGTATCTAT
GAATGAGTTTGAACTGCCTGAAGATTTCTGCAAAGACAAGCCCATCTTCA
ATGAACACCAAGTTGAGTGCAATAAATATATCATATGCGGCGCCCTCGTG
CCGGTTATCCTCAAGTGCCCAGAGCCACTAGCATGGGACAGCAGACGAAA
CATTTGTAATTGGAGACGCTACACCAAATGCAAAACAGAACCAACAACGA
CAGCTACCAATACTAACCAAAAGTGAATGCGCGCTCAACTTCTACTTAGT
GTTTTTTGGGTGTTTGTGAATTTTCATTGTGTATCTATGAATGAGTTTGA
ACTGCCTGAAGATTTCTGCAAAGACAAGCCCATCTTCAATGAACACCAAG
TTGAGTGCAATAAATATATCATATGCGGCGCCCTCGTGCCGGTTATCCTC
AAGTGCCCAGAGCCACTAGCATGGGACAGCAGACGAAACATTTGTAATTG
GAGACGCTACACCAAATGCAAAACAGAACCAACAACGACAGCTACCAATA
CTAACCAAAAGTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000007_pilon | genome | sc0000007_pilon:924019..929100 + |
|
