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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000007_pilon:924019..929100+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.1496.5.p1 ID=MSTRG.1496.5.p1|Name=MSTRG.1496.5.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5082bp|location=Sequence derived from alignment at sc0000007_pilon:924019..929100+ (Clytia hemisphaerica_ch_hm2_pilon)
GTCTCACAGAGAGGGGCACAAGGCGCAAACTTCTAAGAAATATGCGCGCT
CAACTTCTACTTAGTGTTTTTTGGGTGTTTGTGAATTTTCATTGTGTATC
TATGAATGAGTTTGAACTGCCTGAAGGTAAGCGGCTCTTTGGAATGGTAA
ATGGTTTCGCcttattgattttttcctttgttcCTCGTTTCATATAAGct
agtttatgtatgtgtgtttttcagcgacggagaggGTCAGCTTCTGATTT
TTCTAGAACCtgattgactgaggacgacCGTAAATCAACACTTTTTCCGT
CCTCGATTTCGCGGGTCAAACTGAGAGTTATTCAAAATTGCTTCACTCAC
TCTGCTACCCTCAAAAGATTCATTCATACTGCACTATCATAATAAGTTCA
ATAGCAAAATAagtaaatacacgtttttttttataaggaacacgtttata
aggaacgcaaggctgaaaatggttcaaaaaataaggaattgttaaggaac
tgctcaggctgagaataagtggatttgaaaataatgtaccttattgggac
taatttgaccaaattttgatctttcaaggggcaaaaagttcaaaatttgc
tatgtagtaaggaactcgataaggaactttgagactgaaattctctgtaa
aaataaggaactccaggctcagagcaaagttaaggttccttataaaaaaa
acgtgtacaattcCTCTTTCTTAACTTTCAGATTTCTGCAAAGACAAGCC
CATCTTCAATGAACACCAAGTTGAGTGCAATAAATATATCATATGCGGCG
CCCTCGTGCCGGTTATCCTCAAGTGCCCAGAGCCACTAGCATGGGACAGC
AGACGAAACATTTGTAATTGGAGACGCTACACCAAATGCAAAACAGGTAA
GGGTATCTTAAATGTATTTTGCTGAGGAAAACGCTgctactttataagaa
ctatcGCTTGATGGAGAATTGAACTTATTTAGTTTTCTTTTGCAAATAGT
TtcaaaagaaatggaaaatcatACTTTTATCATATTAGTTAAACCAAATT
TGACCTCTCTTTTAGAACCAACAACGACAGCTACCAATACTAACCAAAAG
TGACCAAACACACTATACCTTCTAACACCAGAGGTTGGTACCATAAAACT
GAGCGTGTAAAACTTTAACCGTTTTTTAAATGGTATTGAGTAATAGCTGA
ACACTATTCTTCTACCGGTAGTAAAAAAGTTCAACCTTCTCCTATTTCAC
AGTGCTTGCTGAATTGAAGTGTGATCATACAAAATGTACCTTACCAAATT
GTCGTTGTCAAAGCCCACAGGTTCCTGGTGAATTGCCAACTTCACAGGTC
CCACAAATGGTTCTCATCTCATTCGATGGGCCTGTCAATCAAGCAAATCA
TGAATTTTTCACTGAAACTTTTGATGCTCGGTTGAATCCAAATCGATGTC
CAGTAAAAGTGTCCTTCTTCGTATCGGATCATGGAAATGATTATAAATTG
ACTCAGAAGCTTCATCGGAAAGGTTGGTACATTGTCATCtttgaattctc
aaaaaaaaacctTGGCTTATatatagcgagcacctcactaaaaaccggga
tttttcatctcgtttttaatgagttccactttgacgatttttgaaaaata
gaagcttttcaagtgttttgacgcaaattcgattttttcctcctgcaaag
gcttcaaaagtttaaagtgacgtcaaaaaaccgaatgtttggagcccgaa
aacctgggcttaaaacattcgaaaatgtcgcaaagtggaatggacgttaa
ttgcgtagaaaaaacgcgggtgacgtataggtctagtataggctatggCT
TATACAGATGTGGAAAAGTAAAATTTGTCATGATTGTCCGACAATCTCAA
TATGACTTGATTCAGGATTGAAATATTTTAGTGGTCGCAATTTCAGCTTT
ATCAGTATTTTAGTCCTTATTCCTAATGAGTTCTGCTTCAGAAAGGCAGA
ACATCGgagaatttcatgaaaaaggactTCTGTGTAATGTGgtgaaattt
ctttcttttttttaaagtagtttttttcttttatataaagGTCATGAAAT
CGCTGTCCGATCGTTAGCACCTGACCAAACACACGGATACTGGAAAAACA
TCAGCTATCTTGATCTCGTCAAAGATGTGATTGGTTTAAAGCTCAAACTC
ACATTGAATGGAATCAATCACGTGACCGGTTATCGAGCACCTTTCCACCA
ATCAGCTGGTGACACAACTTTCGCGGCTCTACAAGAGTATGGGTTCGAGT
ATGATTCGTCTCTACCAATCAGATCGAAGGAGAAACAATGGTGGCCGTTC
ACGATGGATTCTGGGATACATTCGTTTGATTGTTTGTCCCCTCCCTGTCC
GAAATGTAAGTAAGCCCATTCATACTCAATACAAGTTGAATAGTTGTAAG
AGCTATGAGAACTTTACACCACGGTCATTGTATGGGCTAAACATCAAGCG
GCGATACTTTTTacaaaaagcagaaaaaattaGCCAAACCAAGAAATCTC
TCTCATTTGGAAATTGATTATATTATATTTCAGTTATATCTTAAACAAAA
GATAATTCGCTCTTTCAGACTCGTACCCTGGATTATGGGAGTTACCATTG
ACGTCATTGAGTGACGGAGAAGAATCTTGCAGGACCTATCAATCGTGCAC
GAATTACGTTCAAACATCAGATGGATTCTACGAtttcttgatgaaaaatt
tcttcCGATTGTACCAAGGAAATAAGGCACCTCTTACACTGGCAGGAACA
GCTTCATGGTTGATGTCCCCAAGCCATCCTTACAGAAGACAAGGTATTAG
GACTtttctattgtcattttacagtGTCTGTGTTTGATAAATGGTTACGA
TTCTACGGGTGAGTGTATCATTGGATTATTCAATTATGCAGGTTCATATT
GCTGGGCTATCAATCAAGTCTCAGATTATCAATTTATACTGGGGAACTGC
GATGCTTTTATTTCCCTATTTTCATTGTCTGCCGAATTCCGTTCCATACA
ATACTTCGGTCCTTTATCCGCTACCTATATCTCTATGTACACGCATGTGT
AAATGTACTGTTATAAAGTATAGTTTTAAGGATGAATAGAGGGCATGAAT
TTCAAAGTTAACAGCGAGAAAGAAGGGATGGAACTTTTACCGTCAGAGAA
TAAAAAGACATAGCCATAGCCTACCATAGGACGTTCTCGTGTCTTGTGAG
AACTTTAAATTGTTTGAAGAAACACGCTTGTCCTGTTCAGAAGTTAGAAG
AGGAAAAGTCAGACACCAAATAGTCACAAAGATTATTCTGAAATAACTAG
AAAAAGTCAGAGCGCTAATGCAAGATGATTGAAACGATTATTGAGTAAGA
GAAGCAAAGAAGGAAAGTTTGGAGGtatgtttcttttattgataGAATTT
AGAGTTGTAATCAATTGACAGTACTAattggtcagccccggtgacccttc
aaatcggtTCCGCTGtttttttCCAGCCGAGTCGCCATCATCATGGTGGG
ATTTGGATAATCAGCTTCAATTCCGATTTTTCCCGATTCGATTTTTGGAC
AACCGGGTTATAATGATATGTGTGCGTCGGGATGCGTTGTAATTTCATAA
TGATTTCATATAGCGCGTCGGCGTTATTGCATCAGCCGTTATCTCCCTTA
TATTGCGCCACCTCTTTCGAAGCGTACTGTGGACAATTTTCTGAAATGTT
TGAGTAGATTCGCAGTAGTAGCTGGCTAAGTTGTTTCACAAACGTGATGG
TTGAATGGCTGGAAGAAGAGTTCAAGCAGTCTCAACTTTCATCATATCTT
GAGGTTGAGGTGAGAGTTTTTGATTTATATGAATCAAAGTTTATTGATTC
CTtgtcaaagttattttcaaaaaagatagcaTATTCAtagtttatatttt
cttttttgcataTTATAAATCTctattataaatcaaaatcctgcaaaatt
tactaaaaatgaACACTCAAATCTCTCTGTTGATTGACAAAAGAATAATG
GACAAAATGTATATATGAATGAATTTGgtgttgaaatgaaaatgttggtA
ATTCGTTGAttgtttattgttgttttaCTATCTGGTGTTACATGTTTATA
GTATCGAAGAAGTCCATGGCTTTGCATCGTTTGAGCTTGGTATTACCATC
GCCTTCCTGTTTTTGTTGTTGGTTCGTTTCTTCACACCTGAATACTGCAC
TGAAAGAGTTCATAAAAGTGATAGGTAAGCTAAAGGTCTCTTTTTGATCC
ATCAAAATTTGCTAACGCAGACACTTTAACGTGTGTTTCTAGGTATATCT
TAGAAAGCAATCATTTTATAGTCCttccattttcatttgaatAATGTCTT
TTTATTCGTCCAGCCATCTCTCAAAGAACGTTAAAAATCTATGATAGTCT
TTTGTCTCAATGAAAGAATAAAAGGGATTTGTTAGCGCTAGTTTGCAAGC
GTTCTGTTTCATTACTTTAACAtacaaaatatttgataaaaagtaTACTG
GTATAGGACTATACCTTAAGCAATTAATCATGAATGATCTAAGTTTTAAA
GAGTGAAGTGATTTTGTTcatgttgttattattatttacCTGTGTATGGG
ACTTAAATATCTTCATTGTTTTGTTGTAGATATGCTATGCCGGGATCAAT
CAATAACCAAATAAAGACCCTGtcaacgcaccggacttaacgaacacggG
ACATGCGAAAGTCcagtgtaaaatgagaatttttttaccatcggacaatc
tctacaccggacttaaggaagtcggatgtctggtgtcggagaaggatatt
tttttccaccggacaatcaaaacaccggaaaCACTAATTCAATGTCTTGT
TATTGGAATTATTGCTGTTGGAATAACATTGGTATTGGACAATAATTAAA
GACTTTATTTCAACTAAAGAGTATTACATATTTCAAATGTATTGCAAaga
agtactctcgggtacctaatagccggggggggggttggaataagcagggg
ggttggaaaaaatctcaaaatttaataagcgg Coding sequence (CDS) from alignment at sc0000007_pilon:924019..929100+ >MSTRG.1496.5.p1 ID=MSTRG.1496.5.p1|Name=MSTRG.1496.5.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3288bp|location=Sequence derived from alignment at sc0000007_pilon:924019..929100+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTTCTCATCTCATTCGATGGGCCTGTCAATCAAGCAAATCATGAATT
TTTCACTGAAACTTTTGATGCTCGGTTGAATCCAAATCGATGTCCAGTAA
AAGTGTCCTTCTTCGTATCGGATCATGGAAATGATTATAAATTGACTCAG
AAGCTTCATCGGAAAGGTCATGAAATCGCTGTCCGATCGTTAGCACCTGA
CCAAACACACGGATACTGGAAAAACATCAGCTATCTTGATCTCGTCAAAG
ATGTGATTGGTTTAAAGCTCAAACTCACATTGAATGGAATCAATCACGTG
ACCGGTTATCGAGCACCTTTCCACCAATCAGCTGGTGACACAACTTTCGC
GGCTCTACAAGAGTATGGGTTCGAGTATGATTCGTCTCTACCAATCAGAT
CGAAGGAGAAACAATGGTGGCCGTTCACGATGGATTCTGGGATACATTCG
TTTGATTGTTTGTCCCCTCCCTGTCCGAAATACTCGTACCCTGGATTATG
GGAGTTACCATTGACGTCATTGAGTGACGGAGAAGAATCTTGCAGGACCT
ATCAATCGTGCACGAATTACGTTCAAACATCAGATGGATTCTACGAtttc
ttgatgaaaaatttcttcCGATTGTACCAAGGAAATAAGGCACCTCTTAC
ACTGGCAGGAACAGCTTCATGGTTGATGTCCCCAAGCCATCCTTACAGAA
GACAAGCCGAGTCGCCATCATCATGGTGGGATTTGGATAATCAGCTTCAA
TTCCGATTTTTCCCGATTCGATTTTTGGACAACCGGGTTATAATGATATG
TGTGCGTCGGGATGCGTTGTAAATGGTTCTCATCTCATTCGATGGGCCTG
TCAATCAAGCAAATCATGAATTTTTCACTGAAACTTTTGATGCTCGGTTG
AATCCAAATCGATGTCCAGTAAAAGTGTCCTTCTTCGTATCGGATCATGG
AAATGATTATAAATTGACTCAGAAGCTTCATCGGAAAGGTCATGAAATCG
CTGTCCGATCGTTAGCACCTGACCAAACACACGGATACTGGAAAAACATC
AGCTATCTTGATCTCGTCAAAGATGTGATTGGTTTAAAGCTCAAACTCAC
ATTGAATGGAATCAATCACGTGACCGGTTATCGAGCACCTTTCCACCAAT
CAGCTGGTGACACAACTTTCGCGGCTCTACAAGAGTATGGGTTCGAGTAT
GATTCGTCTCTACCAATCAGATCGAAGGAGAAACAATGGTGGCCGTTCAC
GATGGATTCTGGGATACATTCGTTTGATTGTTTGTCCCCTCCCTGTCCGA
AATACTCGTACCCTGGATTATGGGAGTTACCATTGACGTCATTGAGTGAC
GGAGAAGAATCTTGCAGGACCTATCAATCGTGCACGAATTACGTTCAAAC
ATCAGATGGATTCTACGAtttcttgatgaaaaatttcttcCGATTGTACC
AAGGAAATAAGGCACCTCTTACACTGGCAGGAACAGCTTCATGGTTGATG
TCCCCAAGCCATCCTTACAGAAGACAAGCCGAGTCGCCATCATCATGGTG
GGATTTGGATAATCAGCTTCAATTCCGATTTTTCCCGATTCGATTTTTGG
ACAACCGGGTTATAATGATATGTGTGCGTCGGGATGCGTTGTAAATGGTT
CTCATCTCATTCGATGGGCCTGTCAATCAAGCAAATCATGAATTTTTCAC
TGAAACTTTTGATGCTCGGTTGAATCCAAATCGATGTCCAGTAAAAGTGT
CCTTCTTCGTATCGGATCATGGAAATGATTATAAATTGACTCAGAAGCTT
CATCGGAAAGGTCATGAAATCGCTGTCCGATCGTTAGCACCTGACCAAAC
ACACGGATACTGGAAAAACATCAGCTATCTTGATCTCGTCAAAGATGTGA
TTGGTTTAAAGCTCAAACTCACATTGAATGGAATCAATCACGTGACCGGT
TATCGAGCACCTTTCCACCAATCAGCTGGTGACACAACTTTCGCGGCTCT
ACAAGAGTATGGGTTCGAGTATGATTCGTCTCTACCAATCAGATCGAAGG
AGAAACAATGGTGGCCGTTCACGATGGATTCTGGGATACATTCGTTTGAT
TGTTTGTCCCCTCCCTGTCCGAAATACTCGTACCCTGGATTATGGGAGTT
ACCATTGACGTCATTGAGTGACGGAGAAGAATCTTGCAGGACCTATCAAT
CGTGCACGAATTACGTTCAAACATCAGATGGATTCTACGAtttcttgatg
aaaaatttcttcCGATTGTACCAAGGAAATAAGGCACCTCTTACACTGGC
AGGAACAGCTTCATGGTTGATGTCCCCAAGCCATCCTTACAGAAGACAAG
CCGAGTCGCCATCATCATGGTGGGATTTGGATAATCAGCTTCAATTCCGA
TTTTTCCCGATTCGATTTTTGGACAACCGGGTTATAATGATATGTGTGCG
TCGGGATGCGTTGTAAATGGTTCTCATCTCATTCGATGGGCCTGTCAATC
AAGCAAATCATGAATTTTTCACTGAAACTTTTGATGCTCGGTTGAATCCA
AATCGATGTCCAGTAAAAGTGTCCTTCTTCGTATCGGATCATGGAAATGA
TTATAAATTGACTCAGAAGCTTCATCGGAAAGGTCATGAAATCGCTGTCC
GATCGTTAGCACCTGACCAAACACACGGATACTGGAAAAACATCAGCTAT
CTTGATCTCGTCAAAGATGTGATTGGTTTAAAGCTCAAACTCACATTGAA
TGGAATCAATCACGTGACCGGTTATCGAGCACCTTTCCACCAATCAGCTG
GTGACACAACTTTCGCGGCTCTACAAGAGTATGGGTTCGAGTATGATTCG
TCTCTACCAATCAGATCGAAGGAGAAACAATGGTGGCCGTTCACGATGGA
TTCTGGGATACATTCGTTTGATTGTTTGTCCCCTCCCTGTCCGAAATACT
CGTACCCTGGATTATGGGAGTTACCATTGACGTCATTGAGTGACGGAGAA
GAATCTTGCAGGACCTATCAATCGTGCACGAATTACGTTCAAACATCAGA
TGGATTCTACGAtttcttgatgaaaaatttcttcCGATTGTACCAAGGAA
ATAAGGCACCTCTTACACTGGCAGGAACAGCTTCATGGTTGATGTCCCCA
AGCCATCCTTACAGAAGACAAGCCGAGTCGCCATCATCATGGTGGGATTT
GGATAATCAGCTTCAATTCCGATTTTTCCCGATTCGATTTTTGGACAACC
GGGTTATAATGATATGTGTGCGTCGGGATGCGTTGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000007_pilon | genome | sc0000007_pilon:924019..929100 + |
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