MSTRG.14917.1.p1 (mRNA) -

Overview
NameMSTRG.14917.1.p1
Unique NameMSTRG.14917.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000128_pilon:89712..91330-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.14917.1.p1 ID=MSTRG.14917.1.p1|Name=MSTRG.14917.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1619bp|location=Sequence derived from alignment at sc0000128_pilon:89712..91330- (Clytia hemisphaerica_ch_hm2_pilon)
AAATATTAACTTTAAAATTTTCACTTAGTTCTGATTCATGATGGGACGTT CAAGACAAGCTTGTACAACCACCAATAAAGATGATAAAGCAACAAAAGCC ACCGAAAGTGATAGAGCATCAAAAGCAACCAAAAGTGATGAAACTTTGAA AGTGAAGTGGCACATGAAGCCACCAAAAAAAGTAAACAAGCAAAGGCAGA ACATAAAGGTAATTTTTTCTTACGTTTGATTGTGCTTTTACTTATTTTCT TTCAGGGTACTTTTAAGTAACTTAGGCCAAGAAGGCTTCCAGTAAGGTAC CTTTTTTAAGACCTCAGATCTAAAAAAAACACTGGCTGAGTCTCAAAGAT TGAAAGTTTTTAAAGACTCAAAAAATATAGAAAAGGCTGTCAAGAACTGG CTAGAATATCTGACACGAGTCAACATAATGTGTGAATTTTAATACAAATT TATTTTTTCTCTAGAAAACATTGGTCCAAAAACTGATAACTCCAAGCAAA CACCAAAGAAAAACACACCATTGAAGTCCGGTAAGGATTATTGTTTTGCT TGAAACTTACAATTATTCAAATTTCTGTTGGAATTTATAAATTCAGCAGA AATTACAGAAGCATTTAAGATTTATCTCTTGATTTTTTTGTCTGTTCGTT TTTGTTTTTTACACACAATTTTGAGTGAAGATGTGAAATGACATCCTATT ATCAGTAAAATCAATTCTCTTAAAGGTGTGATTATGAAGAGAACTCAGAT TTAGTGAAAAATAACTTTACTGGAATTATAAATTTAATCTTAAGAAATTT TCTTTCAGCAGATTCCTTTGATTCGCCAGGCATGAAAAGACCGTCAACCA GTTCAGGAAAGACTCCTACGAAATTATTTCGTCCCAAGAAATCACTCCCC GCAAGTGATACAATATCAGATACAAAAGGTTTGTTTAGTCTATATGATTT TCTATTTGTGTTCTAAACAAAGGTTCTGTTTTTATGCAGTAAACGATTTT GTGTCCACAAGCTTTGGAGTGAGGAATAATTTTATATCAGCGTTACTAAG ATTTTGATTTATTGTTAATGTAATTTAAGTTGATGGATTAGAAGTCTGTG CTGCACAGAAATTACAATTAACATCAAATTCGAACATCTTAGACTGGTTT TGTCTTTTTCATCTTGCATGTGTAGAATTCTCTTATCTCTTTAGATGTAG TCGGCTATGTTGGATGTGTGACTCCAATAAAGGTGAATCAATCAAACACA CGAGAATACTTCACCGTCCATATCAAGACATCAAAAGTTGATTTTTGTCG AGTTATGGTGTCAAATCACCGACAACTAAGAAGAGTTCGTCAAGATTTTG TAAACCGATTCCATAATCATGAGGCAGTTACATTAAAAAAACTGAAACCT GGGGCTGATATATTATTCTTTAACAATTACTCAGAAGTGTTGGTCTATGA TGAAGTGATGTCGTTTCAGTTGAATGATGCTGACAGAGTTCCTGTGGCTG ATATAGATGATCAGGGACTTGTCTTATCGATGTTTGGCAAATTTAAGTTT TGTGGCGAAGTCAAAAATAAGCCCTACAATAAAGCTGATGAAAGGCAACG AGTAGATCGATTGCTGAAT

Coding sequence (CDS) from alignment at sc0000128_pilon:89712..91330-

>MSTRG.14917.1.p1 ID=MSTRG.14917.1.p1|Name=MSTRG.14917.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1044bp|location=Sequence derived from alignment at sc0000128_pilon:89712..91330- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTAGTCGGCTATGTTGGATGTGTGACTCCAATAAAGGTGAATCAATCA
AACACACGAGAATACTTCACCGTCCATATCAAGACATCAAAAGTTGATTT
TTGTCGAGTTATGGTGTCAAATCACCGACAACTAAGAAGAGTTCGTCAAG
ATTTTGTAAACCGATTCCATAATCATGAGGCAGTTACATTAAAAAAACTG
AAACCTGGGGCTGATATATTATTCTTTAACAATTACTCAGAAGTGTTGGT
CTATGATGAAGTGATGTCGTTTCAGTTGAATGATGCTGACAGAGTTCCTG
TGGCTGATATAGATGATCAGGGACTTGTCTTATCGATGTTTGGCAAATTT
AAGTTTTGTGGCGAAGTCAAAAATAAGCCCTACAATAAAGCTGATGAAAG
GCAACGAGTAGATCGATTGCTGAATATGAAAAGACCGTCAACCAGTTCAG
GAAAGACTCCTACGAAATTATTTCGTCCCAAGAAATCACTCCCCGCAAGT
GATACAATATCAGATACAAAAGATGTAGTCGGCTATGTTGGATGTGTGAC
TCCAATAAAGGTGAATCAATCAAACACACGAGAATACTTCACCGTCCATA
TCAAGACATCAAAAGTTGATTTTTGTCGAGTTATGGTGTCAAATCACCGA
CAACTAAGAAGAGTTCGTCAAGATTTTGTAAACCGATTCCATAATCATGA
GGCAGTTACATTAAAAAAACTGAAACCTGGGGCTGATATATTATTCTTTA
ACAATTACTCAGAAGTGTTGGTCTATGATGAAGTGATGTCGTTTCAGTTG
AATGATGCTGACAGAGTTCCTGTGGCTGATATAGATGATCAGGGACTTGT
CTTATCGATGTTTGGCAAATTTAAGTTTTGTGGCGAAGTCAAAAATAAGC
CCTACAATAAAGCTGATGAAAGGCAACGAGTAGATCGATTGCTGAATATG
AAAAGACCGTCAACCAGTTCAGGAAAGACTCCTACGAAATTATTTCGTCC
CAAGAAATCACTCCCCGCAAGTGATACAATATCAGATACAAAAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.14917MSTRG.14917Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.14917.1.p1MSTRG.14917.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.14917.1.p1.exon4MSTRG.14917.1.p1.exon4Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14917.1.p1.exon3MSTRG.14917.1.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14917.1.p1.exon2MSTRG.14917.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14917.1.p1.exon1MSTRG.14917.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000128_pilongenomesc0000128_pilon:89712..91330 -